Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 6.5e-111 404.1 201 100.0
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 8.3e-50 201.1 184 52.7
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 9.2e-49 197.6 184 53.3
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.6e-48 195.3 203 48.8
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 6.6e-47 191.4 193 49.7
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 8.6e-47 191.0 174 55.2
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 8.6e-47 191.0 200 49.0
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 8.6e-47 191.0 184 52.2
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.1e-46 190.7 194 50.0
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 1.9e-46 189.9 199 50.3
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 1.9e-46 189.9 189 51.3
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 2.5e-46 189.5 174 53.4
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.3e-46 189.1 197 49.2
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 3.3e-46 189.1 184 52.7
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 5.6e-46 188.3 177 53.1
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 9.5e-46 187.6 184 52.2
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 1.2e-45 187.2 181 51.9
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 2.1e-45 186.4 184 51.1
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.1e-45 186.4 184 50.5
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 6.2e-45 184.9 201 48.8
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 1.1e-44 184.1 184 50.0
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 1.4e-44 183.7 174 51.7
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 2.3e-44 183.0 175 51.4
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 5.2e-44 181.8 181 49.7
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 1.5e-43 180.3 178 50.0
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 4.4e-43 178.7 177 49.7
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 4.4e-43 178.7 194 48.5
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 5.8e-43 178.3 189 47.1
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 7.5e-43 177.9 181 49.2
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 9.8e-43 177.6 182 51.1
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 1.3e-42 177.2 179 48.0
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.3e-42 177.2 181 49.2
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 2.2e-42 176.4 186 47.8
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 4.9e-42 175.3 203 46.8
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 4.9e-42 175.3 184 50.0
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 4.9e-42 175.3 184 48.9
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 8.3e-42 174.5 179 48.0
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 8.3e-42 174.5 179 47.5
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 8.3e-42 174.5 179 47.5
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 8.3e-42 174.5 184 46.2
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 1.4e-41 173.7 180 50.6
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 1.4e-41 173.7 177 49.2
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 1.9e-41 173.3 175 50.3
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 1.9e-41 173.3 182 47.8
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 2.4e-41 172.9 186 47.3
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 2.4e-41 172.9 183 50.3
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 2.4e-41 172.9 183 50.3
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 3.2e-41 172.6 182 47.8
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.2e-41 172.6 181 49.7
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.2e-41 172.6 181 48.6
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.6e-40 170.2 184 47.8
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.7e-40 169.5 186 46.8
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 2.7e-40 169.5 181 47.5
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 3.5e-40 169.1 182 47.8
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 3.5e-40 169.1 175 50.9
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 3.5e-40 169.1 184 46.2
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 3.5e-40 169.1 184 46.7
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 3.5e-40 169.1 184 46.7
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 4.6e-40 168.7 180 47.2
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 7.8e-40 167.9 185 48.6
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 1.0e-39 167.5 185 49.2
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 1.0e-39 167.5 198 44.9
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 2.3e-39 166.4 180 48.3
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 2.3e-39 166.4 198 45.5
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 3.0e-39 166.0 176 47.7
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 3.0e-39 166.0 192 45.8
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 3.0e-39 166.0 179 48.0
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 3.0e-39 166.0 179 48.0
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 3.0e-39 166.0 179 48.0
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 3.9e-39 165.6 176 47.7
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 3.9e-39 165.6 198 45.5
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 3.9e-39 165.6 181 47.5
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 5.1e-39 165.2 174 46.0
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 6.6e-39 164.9 175 48.6
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 6.6e-39 164.9 183 47.5
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 6.6e-39 164.9 177 48.6
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 8.6e-39 164.5 187 45.5
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 8.6e-39 164.5 198 46.0
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.1e-38 164.1 175 48.6
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 1.1e-38 164.1 245 40.8
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 1.9e-38 163.3 177 47.5
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 2.5e-38 162.9 198 45.5
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 3.3e-38 162.5 175 48.0
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 3.3e-38 162.5 175 47.4
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 4.3e-38 162.2 179 47.5
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 4.3e-38 162.2 175 49.1
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 4.3e-38 162.2 145 53.1
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 5.6e-38 161.8 177 45.2
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 5.6e-38 161.8 198 44.9
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 7.3e-38 161.4 168 47.6
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 9.5e-38 161.0 176 47.7
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 9.5e-38 161.0 197 44.2
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 9.5e-38 161.0 172 46.5
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 9.5e-38 161.0 172 47.1
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 2.8e-37 159.5 205 45.9
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 3.6e-37 159.1 217 42.9
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 4.7e-37 158.7 172 47.1
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.1e-36 156.0 176 48.3
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 6.8e-36 154.8 174 44.3
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 1.5e-35 153.7 185 48.1
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 2.0e-35 153.3 184 43.5
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 6.4e-34 148.3 227 38.8
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 8.3e-34 147.9 175 45.1
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 1.1e-33 147.5 189 42.9
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 1.4e-33 147.1 170 46.5
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 1.2e-32 144.1 191 43.5
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 6.0e-32 141.7 183 43.2
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 7.8e-32 141.4 178 41.6
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 2.5e-30 136.3 193 42.0
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 3.4e-27 125.9 177 37.3
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.2e-26 123.2 123 54.5
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 2.2e-26 123.2 156 39.1
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 8.4e-26 121.3 131 42.7
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 1.2e-24 117.5 118 53.4
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 1.6e-24 117.1 138 43.5
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 6.0e-24 115.2 235 35.3
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 1.5e-19 100.5 110 46.4
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 1.4e-17 94.0 113 45.1
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-16 88.2 111 45.9
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 4.0e-12 75.9 75 45.3
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 3.4e-11 72.8 73 46.6
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 3.8e-10 69.3 62 50.0
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 3.8e-10 69.3 85 50.6
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 4.2e-09 65.9 80 45.0
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 9.3e-09 64.7 82 36.6
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 1.6e-08 63.9 60 45.0


User provided reference genes

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