Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 5.8e-228 793.9 402 100.0
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 7.8e-132 474.6 369 65.3
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 2.1e-129 466.5 383 61.1
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.8e-128 463.4 405 60.0
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.0e-127 459.9 367 64.0
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.3e-126 457.2 373 66.2
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 2.2e-126 456.4 367 63.2
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 3.7e-126 455.7 373 64.1
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 3.7e-126 455.7 372 65.3
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 6.4e-126 454.9 400 59.8
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 1.1e-125 454.1 381 61.2
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.4e-125 453.8 373 61.4
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.4e-125 453.8 373 61.7
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 1.2e-124 450.7 429 55.7
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.2e-124 450.7 374 65.5
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.6e-124 450.3 367 64.6
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 2.1e-124 449.9 395 61.0
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.7e-124 449.5 374 60.4
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 2.7e-124 449.5 373 60.9
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 4.6e-124 448.7 385 61.3
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 4.6e-124 448.7 370 64.1
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 6.0e-124 448.4 367 64.3
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 7.8e-124 448.0 362 62.4
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 1.0e-123 447.6 367 64.3
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.0e-123 447.6 410 58.0
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 3.0e-123 446.0 384 61.2
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 3.0e-123 446.0 410 60.7
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.9e-123 445.7 385 60.0
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 3.9e-123 445.7 379 62.3
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 5.1e-123 445.3 373 61.7
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 8.6e-123 444.5 359 65.2
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 8.6e-123 444.5 373 60.9
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 8.6e-123 444.5 374 61.0
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.5e-122 443.7 359 64.9
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 1.5e-122 443.7 405 57.3
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 1.9e-122 443.4 397 59.4
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 4.3e-122 442.2 372 62.6
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 7.3e-122 441.4 341 65.7
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 9.5e-122 441.0 399 59.6
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.2e-121 440.7 374 59.9
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 2.1e-121 439.9 372 63.4
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 2.8e-121 439.5 374 60.7
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.8e-121 439.5 345 67.2
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 4.7e-121 438.7 364 62.9
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 4.7e-121 438.7 385 61.0
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 1.1e-120 437.6 393 59.3
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.8e-120 436.8 344 64.8
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 5.2e-120 435.3 371 62.5
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 5.2e-120 435.3 364 62.4
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.2e-120 435.3 326 68.1
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 6.8e-120 434.9 463 51.0
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.2e-119 434.1 368 63.0
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 2.0e-119 433.3 335 66.3
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 2.6e-119 433.0 346 65.6
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 3.4e-119 432.6 372 61.0
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 5.8e-119 431.8 369 62.9
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 9.9e-119 431.0 369 62.9
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 9.9e-119 431.0 399 59.1
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.7e-118 430.3 389 58.9
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.7e-118 430.3 365 60.5
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 6.4e-118 428.3 368 62.0
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 1.1e-117 427.6 375 60.5
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 1.9e-117 426.8 332 66.9
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.4e-117 426.4 370 61.9
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 2.4e-117 426.4 407 58.7
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 2.4e-117 426.4 377 60.2
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 4.1e-117 425.6 369 60.7
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 4.1e-117 425.6 405 57.3
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 4.1e-117 425.6 396 56.1
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 5.4e-117 425.2 370 61.9
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 7.1e-117 424.9 382 60.5
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 2.7e-116 422.9 366 60.7
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.0e-115 421.0 394 59.4
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.3e-115 420.6 345 63.2
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 2.3e-115 419.9 345 63.5
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.3e-115 419.9 364 61.8
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 6.6e-115 418.3 390 59.2
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 8.6e-115 417.9 343 64.4
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 2.1e-113 413.3 343 63.0
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 1.1e-112 411.0 351 62.4
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.4e-112 409.8 345 60.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 3.1e-112 409.5 370 57.6
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 4.0e-112 409.1 348 64.1
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 5.2e-112 408.7 306 69.0
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.0e-111 406.8 344 62.5
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.6e-111 406.4 339 60.5
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 8.4e-110 401.4 383 55.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.4e-109 400.6 355 60.8
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.4e-109 399.8 341 62.8
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 6.0e-108 395.2 384 57.6
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 8.7e-107 391.3 366 57.1
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 5.4e-101 372.1 292 65.1
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 6.9e-96 355.1 390 52.8
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 4.3e-90 335.9 378 50.3
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 2.1e-89 333.6 379 49.9
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 5.5e-85 318.9 245 67.8
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 5.5e-85 318.9 360 50.8
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 2.3e-83 313.5 228 72.4
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 8.7e-83 311.6 239 67.8
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.9e-74 283.9 213 70.4
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 2.3e-67 260.4 201 67.2
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 2.8e-65 253.4 213 65.3
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.4e-64 251.1 342 44.7
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 2.4e-64 250.4 384 40.1
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 4.1e-64 249.6 341 42.5
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 1.3e-57 228.0 225 53.8
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 2.2e-54 217.2 347 38.9
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 7.2e-45 185.7 197 49.7
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 2.8e-36 157.1 182 51.6
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 3.6e-28 130.2 251 35.1
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 6.8e-27 125.9 82 74.4
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 2.3e-22 110.9 99 54.5
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.1e-21 108.6 93 58.1
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 3.7e-17 93.6 107 48.6
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 6.4e-17 92.8 156 41.0
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 6.0e-15 86.3 397 25.2
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 6.6e-14 82.8 344 26.7
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 6.8e-11 72.8 125 32.8
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 4.9e-09 66.6 46 69.6


User provided reference genes

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