Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 1.1e-297 1026.2 661 100.0
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 8.4e-208 727.6 657 74.6
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 4.6e-198 695.3 651 75.7
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 6.2e-195 684.9 657 72.3
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 3.8e-192 675.6 653 72.7
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 3.2e-191 672.5 658 72.0
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 3.2e-191 672.5 643 72.3
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 7.1e-191 671.4 651 68.5
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.7e-190 669.5 657 72.0
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 2.7e-190 669.5 643 72.5
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 1.0e-189 667.5 655 72.1
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 1.9e-188 663.3 658 72.3
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.7e-187 659.1 655 67.8
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 6.3e-187 658.3 657 72.9
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.2e-185 654.1 640 70.6
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 2.0e-185 653.3 690 62.2
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 3.4e-185 652.5 639 71.0
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 5.9e-185 651.7 636 71.4
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 5.9e-185 651.7 636 71.4
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 7.6e-185 651.4 636 71.4
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 1.0e-184 651.0 667 69.1
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 2.2e-184 649.8 641 70.8
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 2.9e-184 649.4 649 71.0
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 3.8e-184 649.0 651 72.2
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 8.4e-184 647.9 648 70.7
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 8.4e-184 647.9 648 70.7
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.4e-183 647.1 667 69.3
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 1.9e-183 646.7 648 69.9
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 5.5e-183 645.2 657 71.5
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 5.5e-183 645.2 642 70.2
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 7.2e-183 644.8 653 69.4
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 7.2e-183 644.8 609 73.7
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 7.2e-183 644.8 661 69.9
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 9.3e-183 644.4 641 70.8
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 1.2e-182 644.0 648 69.3
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 2.1e-182 643.3 639 69.8
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 2.7e-182 642.9 652 69.6
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.5e-182 642.5 664 66.6
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 3.5e-182 642.5 645 73.0
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 6.1e-182 641.7 647 69.2
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 6.1e-182 641.7 672 68.3
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 2.3e-181 639.8 650 70.9
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 3.9e-181 639.0 656 72.3
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 5.7e-180 635.2 640 68.4
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 7.4e-180 634.8 653 69.4
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.6e-179 633.6 645 68.7
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 1.6e-179 633.6 647 67.4
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 1.8e-178 630.2 555 76.9
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 9.0e-178 627.9 651 69.4
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 1.2e-177 627.5 649 67.8
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 5.9e-177 625.2 659 68.6
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 1.7e-176 623.6 643 69.1
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 1.7e-176 623.6 651 69.0
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 2.2e-176 623.2 658 65.5
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 5.0e-176 622.1 648 68.2
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 8.5e-176 621.3 659 68.4
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 1.1e-175 620.9 649 69.6
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 2.5e-175 619.8 649 70.9
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 3.2e-175 619.4 647 68.9
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 4.2e-175 619.0 655 68.1
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 7.2e-175 618.2 650 70.8
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 1.2e-174 617.5 649 67.5
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.2e-174 617.5 648 64.7
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 7.9e-174 614.8 651 70.0
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 3.9e-173 612.5 648 68.7
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 6.7e-173 611.7 648 70.4
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 6.7e-173 611.7 657 69.3
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 1.1e-172 610.9 661 68.4
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 1.1e-172 610.9 646 68.6
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.5e-172 609.8 648 68.5
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 2.2e-171 606.7 648 68.4
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.3e-171 605.1 648 62.0
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 1.1e-170 604.4 662 68.0
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 1.8e-170 603.6 641 66.3
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 3.1e-170 602.8 671 68.4
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 9.1e-170 601.3 656 57.8
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 5.9e-169 598.6 653 67.5
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 7.7e-169 598.2 650 64.6
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 1.0e-168 597.8 646 70.4
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 1.3e-168 597.4 654 61.8
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 2.2e-168 596.7 649 62.7
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 2.9e-168 596.3 660 66.2
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 2.9e-168 596.3 645 67.3
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 1.1e-167 594.3 617 69.4
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 1.9e-167 593.6 645 64.7
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 2.1e-166 590.1 651 63.4
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 2.7e-166 589.7 651 61.1
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 2.7e-166 589.7 635 67.4
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 4.7e-166 589.0 653 64.9
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 1.0e-165 587.8 654 65.6
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 2.3e-165 586.6 655 61.2
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 3.3e-164 582.8 648 55.7
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 4.4e-164 582.4 649 68.6
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 9.7e-164 581.3 554 69.7
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 3.7e-163 579.3 660 65.6
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 4.8e-163 578.9 659 65.4
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 7.0e-162 575.1 570 72.1
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.3e-160 570.9 647 63.1
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 1.9e-159 567.0 651 62.4
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 3.2e-159 566.2 555 60.9
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 6.1e-158 562.0 648 65.3
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 1.0e-157 561.2 685 62.8
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 3.3e-156 556.2 690 61.4
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 5.7e-156 555.4 664 63.0
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 1.3e-155 554.3 709 55.4
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 5.3e-154 548.9 676 59.0
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 1.3e-152 544.3 675 56.6
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 6.5e-152 542.0 651 58.4
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 1.6e-145 520.8 590 64.9
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.4e-141 507.7 647 57.8
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 8.8e-141 505.0 612 60.0
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 3.5e-137 493.0 665 53.8
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 4.3e-135 486.1 512 71.7
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 9.5e-135 485.0 609 55.8
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 2.8e-134 483.4 646 63.2
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 2.4e-130 470.3 519 70.5
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 3.2e-130 469.9 602 56.5
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 2.1e-126 457.2 521 71.2
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 4.4e-124 449.5 701 57.9
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 7.5e-124 448.7 524 69.8
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 1.0e-120 438.3 495 68.3
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 4.1e-114 416.4 242 81.8
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 6.0e-113 412.5 511 59.3
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 7.1e-106 389.0 250 76.0
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 1.7e-104 384.4 519 57.2
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 2.9e-99 367.1 291 68.4
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 6.4e-99 365.9 484 66.7
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 2.5e-87 327.4 306 60.1
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 8.1e-86 322.4 475 53.7
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 7.6e-84 315.8 505 39.8
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 6.9e-77 292.7 239 59.4
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 3.4e-76 290.4 207 70.0
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 2.2e-67 261.2 290 51.0
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 2.1e-65 254.6 304 80.3
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 5.3e-61 240.0 214 60.3
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 1.2e-60 238.8 281 52.0
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 2.2e-59 234.6 316 72.8
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 1.9e-58 231.5 171 66.1
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 5.9e-52 209.9 264 48.5
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 4.7e-49 200.3 289 43.3
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 3.0e-48 197.6 228 50.4
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 3.7e-46 190.7 138 67.4
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 9.1e-45 186.0 288 80.2
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 1.3e-43 182.2 300 42.0
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 5.5e-42 176.8 131 63.4
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 3.7e-38 164.1 111 73.0
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 3.1e-37 161.0 87 81.6
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 5.9e-36 156.8 111 70.3
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-34 151.4 321 59.5
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 4.4e-31 140.6 170 47.1
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 9.8e-31 139.4 201 40.8
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 1.7e-30 138.7 181 47.0
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 2.3e-27 128.3 155 47.1
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 2.5e-26 124.8 189 45.5
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 6.8e-24 116.7 215 34.4
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.7e-22 112.1 93 59.1
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 4.9e-22 110.5 556 31.3
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.1e-21 109.4 96 57.3
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 4.1e-21 107.5 96 57.3
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 9.2e-21 106.3 105 53.3
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 2.0e-15 88.6 69 60.9
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 1.7e-14 85.5 68 58.8
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 2.4e-13 81.6 119 42.0
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 1.6e-12 79.0 63 58.7
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 3.5e-12 77.8 61 59.0
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.0e-11 74.7 66 57.6
A02p18780 Brassica napus HOM05D003766 ORTHO05D004607 1.5e-10 72.4 84 51.2
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 1.2e-09 69.3 55 58.2
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 4.7e-09 67.4 160 36.2
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 1.2e-07 62.8 48 58.3
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 5.8e-07 60.5 59 49.2
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 9.8e-07 59.7 94 39.4
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 1.7e-06 58.9 73 45.2
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 2.2e-06 58.5 44 59.1
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.2e-06 58.5 52 51.9
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 2.9e-06 58.2 49 53.1
EL10Ac8g19330 Beta vulgaris HOM05D003766 ORTHO05D004607 4.9e-06 57.4 68 52.9


User provided reference genes

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