Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G3257 Ceratophyllum demersum HOM05D003759 ORTHO05D004149 1.9e-87 325.9 171 100.0
CDE02G3703 Ceratophyllum demersum HOM05D003759 ORTHO05D004149 5.2e-77 291.2 171 88.3
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 4.5e-20 102.1 179 41.3
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.1e-14 83.2 178 38.2
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 4.1e-13 79.0 186 38.2
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 2.2e-11 73.2 108 43.5
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 4.2e-10 68.9 82 52.4
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 9.3e-10 67.8 77 53.2
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 1.2e-09 67.4 129 38.0
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.2e-09 67.4 77 53.2
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 1.2e-09 67.4 131 38.9
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 2.1e-09 66.6 107 43.9
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 2.1e-09 66.6 89 47.2
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 2.7e-09 66.2 129 38.0
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 4.6e-09 65.5 98 46.9
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 6.1e-09 65.1 122 41.0
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 6.1e-09 65.1 122 41.0
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 7.9e-09 64.7 141 36.9
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 1.0e-08 64.3 83 45.8
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 1.3e-08 63.9 128 37.5
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.3e-08 63.9 165 33.3
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.8e-08 63.5 127 38.6
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 2.3e-08 63.2 108 42.6
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 2.3e-08 63.2 74 51.4
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 3.0e-08 62.8 108 41.7
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 3.0e-08 62.8 98 41.8
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 3.9e-08 62.4 168 32.1
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 3.9e-08 62.4 98 45.9
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 5.1e-08 62.0 110 42.7
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.7e-08 61.6 109 42.2
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.7e-08 61.6 97 45.4
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 6.7e-08 61.6 164 31.7
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 6.7e-08 61.6 85 43.5
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 6.7e-08 61.6 109 43.1
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 8.7e-08 61.2 78 51.3
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 8.7e-08 61.2 88 48.9
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 8.7e-08 61.2 93 44.1
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 8.7e-08 61.2 131 36.6
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 1.5e-07 60.5 102 41.2
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 1.9e-07 60.1 75 49.3
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 2.5e-07 59.7 90 46.7
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 2.5e-07 59.7 149 35.6
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 3.3e-07 59.3 90 46.7
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 3.3e-07 59.3 178 32.0
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 3.3e-07 59.3 136 30.9
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.3e-07 58.9 137 32.1
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 4.3e-07 58.9 129 36.4
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 5.7e-07 58.5 109 40.4
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 5.7e-07 58.5 109 40.4
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 5.7e-07 58.5 80 48.8
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 5.7e-07 58.5 85 43.5
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 5.7e-07 58.5 96 41.7
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 7.4e-07 58.2 168 33.9
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 7.4e-07 58.2 188 28.7
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 7.4e-07 58.2 89 39.3
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 9.7e-07 57.8 95 37.9
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 9.7e-07 57.8 58 51.7
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 9.7e-07 57.8 105 39.0
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 9.7e-07 57.8 167 31.7
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 9.7e-07 57.8 82 46.3
Sed0022175 Sechium edule HOM05D003759 ORTHO05D004149 9.7e-07 57.8 98 42.9
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 9.7e-07 57.8 95 44.2
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 1.3e-06 57.4 89 43.8
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 1.3e-06 57.4 90 42.2
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 1.3e-06 57.4 132 36.4
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.3e-06 57.4 71 50.7
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 1.3e-06 57.4 71 50.7
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.6e-06 57.0 137 32.1
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 1.6e-06 57.0 128 36.7
PSO339G1361 Papaver somniferum HOM05D003759 ORTHO05D004149 1.6e-06 57.0 176 34.7
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.6e-06 57.0 94 39.4
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 2.2e-06 56.6 175 34.3
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.2e-06 56.6 64 53.1
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 2.2e-06 56.6 71 42.3
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 2.2e-06 56.6 58 48.3
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 2.8e-06 56.2 79 41.8
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.8e-06 56.2 77 44.2
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 2.8e-06 56.2 147 32.0
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.7e-06 55.8 82 42.7
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 3.7e-06 55.8 131 34.4
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 4.8e-06 55.5 135 31.1
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 6.3e-06 55.1 85 40.0
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 6.3e-06 55.1 97 43.3
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 6.3e-06 55.1 92 45.7
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 8.2e-06 54.7 59 49.2
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 8.2e-06 54.7 75 42.7
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 8.2e-06 54.7 94 41.5
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 8.2e-06 54.7 98 41.8


User provided reference genes

Program Settings