Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2962 Ceratophyllum demersum HOM05D004789 ORTHO05D006078 5.7e-86 320.9 159 100.0
CDE05G3244 Ceratophyllum demersum HOM05D004789 ORTHO05D006078 7.5e-38 161.0 107 77.6
Lsat_1_v5_gn_3_24661 Lactuca sativa HOM05D004789 ORTHO05D006078 9.6e-25 117.5 100 60.0
MBI11_g05799_MAGBIO Magnolia biondii HOM05D004789 ORTHO05D006078 1.2e-24 117.1 107 58.9
COL.COLO4_38035 Corchorus olitorius HOM05D004789 ORTHO05D006078 3.6e-24 115.5 116 53.4
PSO017G6674 Papaver somniferum HOM05D004789 ORTHO05D006078 4.7e-24 115.2 107 57.0
PSO675G5907 Papaver somniferum HOM05D004789 ORTHO05D006078 4.7e-24 115.2 107 57.0
Gohir.D08G246500 Gossypium hirsutum HOM05D004789 ORTHO05D006078 2.4e-23 112.8 99 57.6
Gorai.004G263000 Gossypium raimondii HOM05D004789 ORTHO05D006078 2.4e-23 112.8 99 57.6
ATR0661G474 Amborella trichopoda HOM05D004789 ORTHO05D006078 3.1e-23 112.5 108 56.5
Nitab4.5_0000083g0070 Nicotiana tabacum HOM05D004789 ORTHO05D006078 3.1e-23 112.5 102 56.9
SGA_v2.0_scaffold11G05812 Striga asiatica HOM05D004789 ORTHO05D006078 4.0e-23 112.1 102 58.8
Aqoxy2G01476 Aquilegia oxysepala HOM05D004789 ORTHO05D006078 5.2e-23 111.7 108 53.7
DCAR_020684 Daucus carota HOM05D004789 ORTHO05D006078 5.2e-23 111.7 110 54.5
Eucgr.C00113 Eucalyptus grandis HOM05D004789 ORTHO05D006078 5.2e-23 111.7 134 47.0
PGSC0003DMG400010518 Solanum tuberosum HOM05D004789 ORTHO05D006078 5.2e-23 111.7 102 56.9
Atru.BG.270.p Acer truncatum HOM05D004789 ORTHO05D006078 8.9e-23 110.9 98 58.2
Thecc.05G194100 Theobroma cacao HOM05D004789 ORTHO05D006078 8.9e-23 110.9 116 53.4
CAN.G1807.2 Capsicum annuum HOM05D004789 ORTHO05D006078 1.2e-22 110.5 102 56.9
HPP92_008120 Vanilla planifolia HOM05D004789 ORTHO05D006078 1.2e-22 110.5 107 53.3
GSVIVG01019077001 Vitis vinifera HOM05D004789 ORTHO05D006078 1.5e-22 110.2 98 58.2
Duzib106G1853 Durio zibethinus HOM05D004789 ORTHO05D006078 3.4e-22 109.0 99 55.6
Nitab4.5_0001435g0010 Nicotiana tabacum HOM05D004789 ORTHO05D006078 3.4e-22 109.0 102 55.9
SGA_v2.0_scaffold14G07118 Striga asiatica HOM05D004789 ORTHO05D006078 3.4e-22 109.0 102 57.8
Actinidia06832 Actinidia chinensis HOM05D004789 ORTHO05D006078 4.4e-22 108.6 98 58.2
HanXRQChr06g0173981 Helianthus annuus HOM05D004789 ORTHO05D006078 4.4e-22 108.6 107 54.2
Medtr7g080117 Medicago truncatula HOM05D004789 ORTHO05D006078 4.4e-22 108.6 99 54.5
Sopen04g025480 Solanum pennellii HOM05D004789 ORTHO05D006078 5.8e-22 108.2 101 55.4
CANSAT54G2477 Cannabis sativa HOM05D004789 ORTHO05D006078 9.9e-22 107.5 98 57.1
HanXRQChr06g0174041 Helianthus annuus HOM05D004789 ORTHO05D006078 9.9e-22 107.5 100 56.0
SalBow1G3031 Salvia bowleyana HOM05D004789 ORTHO05D006078 9.9e-22 107.5 106 55.7
Solyc04g056540.3 Solanum lycopersicum HOM05D004789 ORTHO05D006078 9.9e-22 107.5 111 53.2
TWI36G0056 Tripterygium wilfordii HOM05D004789 ORTHO05D006078 9.9e-22 107.5 127 47.2
VMungo1383G0580 Vigna mungo HOM05D004789 ORTHO05D006078 1.7e-21 106.7 98 55.1
Psat3g102920 Pisum sativum HOM05D004789 ORTHO05D006078 2.2e-21 106.3 99 53.5
PGR083G2717 Punica granatum HOM05D004789 ORTHO05D006078 2.2e-21 106.3 119 50.4
PGR092G0005 Punica granatum HOM05D004789 ORTHO05D006078 2.2e-21 106.3 119 50.4
Ciclev10011346m.g Citrus clementina HOM05D004789 ORTHO05D006078 2.9e-21 105.9 126 46.8
Cpa.g.sc2508.1 Carica papaya HOM05D004789 ORTHO05D006078 3.8e-21 105.5 123 48.8
MELO3C010050.2 Cucumis melo HOM05D004789 ORTHO05D006078 3.8e-21 105.5 108 51.9
PGR119G2005 Punica granatum HOM05D004789 ORTHO05D006078 3.8e-21 105.5 112 52.7
Sc16g0010430 Simmondsia chinensis HOM05D004789 ORTHO05D006078 3.8e-21 105.5 110 52.7
vmacro19979 Vaccinium macrocarpon HOM05D004789 ORTHO05D006078 3.8e-21 105.5 99 57.6
AUR62000303 Chenopodium quinoa HOM05D004789 ORTHO05D006078 4.9e-21 105.1 107 52.3
AUR62006648 Chenopodium quinoa HOM05D004789 ORTHO05D006078 4.9e-21 105.1 107 52.3
Hma1.2p1_0609F.1_g188420 Hydrangea macrophylla HOM05D004789 ORTHO05D006078 6.4e-21 104.8 110 52.7
Hma1.2p1_0609F.1_g188430 Hydrangea macrophylla HOM05D004789 ORTHO05D006078 6.4e-21 104.8 110 52.7
EL10Ac4g09992 Beta vulgaris HOM05D004789 ORTHO05D006078 8.4e-21 104.4 107 53.3
Cc09_g03720 Coffea canephora HOM05D004789 ORTHO05D006078 8.4e-21 104.4 104 55.8
MELO3C010048.2 Cucumis melo HOM05D004789 ORTHO05D006078 8.4e-21 104.4 99 52.5
QL01p049601 Quercus lobata HOM05D004789 ORTHO05D006078 1.1e-20 104.0 123 49.6
Sp5g14500 Schrenkiella parvula HOM05D004789 ORTHO05D006078 1.1e-20 104.0 110 51.8
HanXRQChr17g0538711 Helianthus annuus HOM05D004789 ORTHO05D006078 1.4e-20 103.6 98 54.1
Manes.12G005100 Manihot esculenta HOM05D004789 ORTHO05D006078 1.9e-20 103.2 99 53.5
Rhsim05G0170800 Rhododendron simsii HOM05D004789 ORTHO05D006078 1.9e-20 103.2 99 57.6
Carub.0005s1348 Capsella rubella HOM05D004789 ORTHO05D006078 2.4e-20 102.8 98 54.1
Dinv29093 Davidia involucrata HOM05D004789 ORTHO05D006078 2.4e-20 102.8 98 56.1
Lsat_1_v5_gn_8_109000 Lactuca sativa HOM05D004789 ORTHO05D006078 2.4e-20 102.8 107 49.5
Lj1g0000623 Lotus japonicus HOM05D004789 ORTHO05D006078 2.4e-20 102.8 99 53.5
CSS0046891 Camellia sinensis var. sinensis HOM05D004789 ORTHO05D006078 3.2e-20 102.4 98 55.1
BcaC01g01832 Brassica carinata HOM05D004789 ORTHO05D006078 4.2e-20 102.1 98 53.1
BolC3t19438H Brassica oleracea HOM05D004789 ORTHO05D006078 4.2e-20 102.1 98 53.1
Ca_07992_v3 Cicer arietinum L. HOM05D004789 ORTHO05D006078 4.2e-20 102.1 99 50.5
Thhalv10010225m.g Eutrema salsugineum HOM05D004789 ORTHO05D006078 4.2e-20 102.1 98 54.1
Oeu009739.1 Olea europaea HOM05D004789 ORTHO05D006078 4.2e-20 102.1 98 53.1
Phvul.008G053900 Phaseolus vulgaris HOM05D004789 ORTHO05D006078 4.2e-20 102.1 98 52.0
Potri.019G054000 Populus trichocarpa HOM05D004789 ORTHO05D006078 4.2e-20 102.1 98 55.1
Hund07352 Selenicereus undatus HOM05D004789 ORTHO05D006078 4.2e-20 102.1 103 51.5
Hund21904 Selenicereus undatus HOM05D004789 ORTHO05D006078 4.2e-20 102.1 104 51.0
Migut.F02116 Erythranthe guttata HOM05D004789 ORTHO05D006078 5.4e-20 101.7 106 52.8
CSS0025571 Camellia sinensis var. sinensis HOM05D004789 ORTHO05D006078 7.1e-20 101.3 98 55.1
THA.LOC104801872 Tarenaya hassleriana HOM05D004789 ORTHO05D006078 7.1e-20 101.3 98 52.0
A06p20290 Brassica napus HOM05D004789 ORTHO05D006078 9.3e-20 100.9 98 53.1
BraA06t25110Z Brassica rapa HOM05D004789 ORTHO05D006078 9.3e-20 100.9 98 53.1
Lalb_Chr03g0038671 Lupinus albus HOM05D004789 ORTHO05D006078 9.3e-20 100.9 91 57.1
Sed0025011 Sechium edule HOM05D004789 ORTHO05D006078 9.3e-20 100.9 98 53.1
TPR.G10693 Trifolium pratense HOM05D004789 ORTHO05D006078 9.3e-20 100.9 99 50.5
C03p71470 Brassica napus HOM05D004789 ORTHO05D006078 1.6e-19 100.1 98 52.0
FvH4_6g00440 Fragaria vesca HOM05D004789 ORTHO05D006078 1.6e-19 100.1 98 56.1
Sabra19G0063100 Salix brachista HOM05D004789 ORTHO05D006078 1.6e-19 100.1 98 54.1
Aa31csc271G10 Aethionema arabicum HOM05D004789 ORTHO05D006078 2.1e-19 99.8 98 51.0
Aa31sc60G10 Aethionema arabicum HOM05D004789 ORTHO05D006078 3.5e-19 99.0 98 51.0
AL5G26580 Arabidopsis lyrata HOM05D004789 ORTHO05D006078 3.5e-19 99.0 98 53.1
AT3G47390 Arabidopsis thaliana HOM05D004789 ORTHO05D006078 3.5e-19 99.0 98 53.1
arahy.Tifrunner.gnm1.ann1.537LAH Arachis hypogaea HOM05D004789 ORTHO05D006078 4.6e-19 98.6 98 52.0
arahy.Tifrunner.gnm1.ann1.66TKXZ Arachis hypogaea HOM05D004789 ORTHO05D006078 4.6e-19 98.6 98 52.0
MD04G1245400 Malus domestica HOM05D004789 ORTHO05D006078 6.0e-19 98.2 98 53.1
MD13G1061000 Malus domestica HOM05D004789 ORTHO05D006078 6.0e-19 98.2 98 53.1
unitig_0.g1013 Utricularia gibba HOM05D004789 ORTHO05D006078 7.8e-19 97.8 102 52.9
BcaB01g00932 Brassica carinata HOM05D004789 ORTHO05D006078 1.3e-18 97.1 98 52.0
RcHm_v2.0_Chr3g0447811 Rosa chinensis HOM05D004789 ORTHO05D006078 2.3e-18 96.3 98 52.0
Mapoly0151s0033 Marchantia polymorpha HOM05D004789 ORTHO05D006078 3.0e-18 95.9 100 53.0
Glyma.09G249800 Glycine max HOM05D004789 ORTHO05D006078 5.1e-18 95.1 98 50.0
ClCG03G010600 Citrullus lanatus HOM05D004789 ORTHO05D006078 1.5e-17 93.6 88 53.4
Peaxi162Scf00048g00311 Petunia axillaris HOM05D004789 ORTHO05D006078 3.3e-17 92.4 136 40.4
Prupe.6G362000 Prunus persica HOM05D004789 ORTHO05D006078 3.3e-17 92.4 98 52.0
Pp3c21_670 Physcomitrium patens HOM05D004789 ORTHO05D006078 1.6e-16 90.1 98 51.0
AagrBONN_evm.TU.Sc2ySwM_117.447 Anthoceros agrestis HOM05D004789 ORTHO05D006078 2.1e-16 89.7 100 49.0
SMO141G0244 Selaginella moellendorffii HOM05D004789 ORTHO05D006078 2.8e-16 89.4 114 45.6
SEGI_07080 Sequoiadendron giganteum HOM05D004789 ORTHO05D006078 3.6e-16 89.0 101 45.5
Nn1g09737 Nelumbo nucifera HOM05D004789 ORTHO05D006078 6.2e-16 88.2 65 64.6
SHI13715 Sapria himalayana HOM05D004789 ORTHO05D006078 2.4e-15 86.3 98 44.9
CBR_g21226 Chara braunii HOM05D004789 ORTHO05D006078 4.0e-15 85.5 134 41.8
Pp3c19_9150 Physcomitrium patens HOM05D004789 ORTHO05D006078 4.0e-15 85.5 98 52.0
TAR626G0377 Trochodendron aralioides HOM05D004789 ORTHO05D006078 6.9e-15 84.7 65 63.1
ATR0804G063 Amborella trichopoda HOM05D004789 ORTHO05D006078 1.2e-14 84.0 65 66.2
Pp3c15_7710 Physcomitrium patens HOM05D004789 ORTHO05D006078 9.9e-14 80.9 100 46.0
Cre17.g728950 Chlamydomonas reinhardtii HOM05D004789 ORTHO05D006078 8.4e-13 77.8 99 46.5
FAN09G1869 Fragaria x ananassa HOM05D004789 ORTHO05D006078 5.4e-12 75.1 79 53.2
Aa31sc348G30 Aethionema arabicum HOM05D004789 ORTHO05D006078 1.6e-11 73.6 59 59.3
CiPaw.07G081200 Carya illinoinensis HOM05D004789 ORTHO05D006078 1.7e-10 70.1 34 91.2
Glyma.18G242600 Glycine max HOM05D004789 ORTHO05D006078 1.7e-10 70.1 41 75.6
Cpa.g.sc39.16 Carica papaya HOM05D004789 ORTHO05D006078 3.0e-10 69.3 39 76.9
Haze_04568 Corylus avellana HOM05D004789 ORTHO05D006078 1.1e-09 67.4 34 88.2
FAN14G5139 Fragaria x ananassa HOM05D004789 ORTHO05D006078 1.1e-09 67.4 34 88.2
Gohir.A08G226100 Gossypium hirsutum HOM05D004789 ORTHO05D006078 1.1e-09 67.4 34 88.2
SEGI_29409 Sequoiadendron giganteum HOM05D004789 ORTHO05D006078 1.1e-09 67.4 127 35.4
Lj2C731T11 Lonicera japonica HOM05D004789 ORTHO05D006078 5.6e-09 65.1 46 65.2
Ah.06g195430 Amaranthus hybridus HOM05D004789 ORTHO05D006078 9.6e-09 64.3 34 82.4
Nn1g09776 Nelumbo nucifera HOM05D004789 ORTHO05D006078 9.6e-09 64.3 34 82.4
SalBow1G4379 Salvia bowleyana HOM05D004789 ORTHO05D006078 1.3e-08 63.9 58 53.4
ATR0804G049 Amborella trichopoda HOM05D004789 ORTHO05D006078 1.4e-07 60.5 35 71.4
ECA236G3464 Erigeron canadensis HOM05D004789 ORTHO05D006078 2.4e-07 59.7 34 79.4
CARHR156030 Cardamine hirsuta HOM05D004789 ORTHO05D006078 3.1e-07 59.3 34 76.5
CsaV3_1G044470 Cucumis sativus L. HOM05D004789 ORTHO05D006078 5.3e-07 58.5 34 73.5
Zm00001eb240960 Zea mays HOM05D004789 ORTHO05D006078 5.3e-07 58.5 34 70.6
Ah.01g017460 Amaranthus hybridus HOM05D004789 ORTHO05D006078 9.0e-07 57.8 34 70.6
HanXRQChr11g0327871 Helianthus annuus HOM05D004789 ORTHO05D006078 9.0e-07 57.8 55 58.2
Sed0000944 Sechium edule HOM05D004789 ORTHO05D006078 3.4e-06 55.8 34 76.5


User provided reference genes

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