Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 2.2e-114 415.6 202 100.0
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 3.0e-84 315.5 194 78.9
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 7.5e-83 310.8 194 78.9
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 2.2e-82 309.3 196 76.5
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 6.3e-82 307.8 195 79.0
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 8.3e-82 307.4 195 79.5
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 2.0e-80 302.8 193 76.7
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 2.7e-80 302.4 203 75.9
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 3.5e-80 302.0 203 74.4
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 3.5e-80 302.0 193 77.7
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 1.0e-79 300.4 198 75.3
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 1.0e-79 300.4 193 76.2
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 1.3e-79 300.1 193 76.2
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 1.3e-79 300.1 197 77.2
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 1.3e-79 300.1 203 73.4
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 1.3e-79 300.1 193 76.2
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 1.7e-79 299.7 193 77.7
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 1.7e-79 299.7 193 77.7
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 1.7e-79 299.7 193 77.7
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 1.7e-79 299.7 193 76.7
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 1.7e-79 299.7 193 76.7
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.7e-79 299.7 197 74.6
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.7e-79 299.7 197 74.6
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 2.9e-79 298.9 193 75.6
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 2.9e-79 298.9 193 76.7
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 3.8e-79 298.5 193 76.2
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 5.0e-79 298.1 188 77.7
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 6.6e-79 297.7 193 76.2
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 6.6e-79 297.7 188 75.5
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 8.6e-79 297.4 193 75.1
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 8.6e-79 297.4 198 74.7
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 1.1e-78 297.0 193 77.2
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 1.1e-78 297.0 197 76.6
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.1e-78 297.0 197 76.6
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 1.1e-78 297.0 203 72.9
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 1.1e-78 297.0 193 75.6
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 1.1e-78 297.0 203 73.9
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.5e-78 296.6 197 74.1
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.9e-78 296.2 197 76.1
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 1.9e-78 296.2 193 75.6
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 1.9e-78 296.2 203 74.4
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 1.9e-78 296.2 193 75.6
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 2.5e-78 295.8 193 75.6
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 4.2e-78 295.0 193 74.6
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 5.5e-78 294.7 193 75.6
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 7.2e-78 294.3 193 76.2
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.5e-78 293.9 193 75.6
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.5e-78 293.9 193 75.6
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 9.5e-78 293.9 203 72.4
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 9.5e-78 293.9 193 76.7
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 1.2e-77 293.5 193 74.6
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 1.2e-77 293.5 193 76.2
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 1.6e-77 293.1 193 75.1
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 1.6e-77 293.1 203 72.9
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 2.1e-77 292.7 188 77.1
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 2.8e-77 292.4 193 75.6
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 2.8e-77 292.4 193 75.6
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 2.8e-77 292.4 193 74.6
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 3.6e-77 292.0 193 76.2
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 3.6e-77 292.0 197 74.1
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 4.7e-77 291.6 193 74.1
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 4.7e-77 291.6 203 71.9
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 6.1e-77 291.2 203 72.9
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 6.1e-77 291.2 193 73.6
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 1.0e-76 290.4 193 74.1
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 1.0e-76 290.4 203 73.9
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 1.8e-76 289.7 203 71.9
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 1.8e-76 289.7 193 75.1
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 4.0e-76 288.5 203 72.4
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 4.0e-76 288.5 197 73.6
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 5.2e-76 288.1 203 71.9
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 5.2e-76 288.1 195 73.8
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 8.9e-76 287.3 193 74.6
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 1.2e-75 287.0 193 74.6
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 1.5e-75 286.6 193 74.1
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 1.5e-75 286.6 193 74.1
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 4.4e-75 285.0 194 75.3
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 4.4e-75 285.0 188 73.9
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 5.7e-75 284.6 194 74.7
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 7.5e-75 284.3 194 71.6
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 9.8e-75 283.9 193 75.1
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 4.9e-74 281.6 194 73.2
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 4.9e-74 281.6 194 73.2
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.9e-74 281.6 188 73.4
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 6.3e-74 281.2 194 73.7
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 8.3e-74 280.8 194 73.7
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 8.3e-74 280.8 194 74.2
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 8.3e-74 280.8 194 74.2
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 1.1e-73 280.4 193 71.5
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 4.1e-73 278.5 193 71.5
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 4.1e-73 278.5 193 71.5
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 5.4e-73 278.1 194 72.7
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 7.0e-73 277.7 193 72.0
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 2.7e-72 275.8 193 71.5
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 3.5e-72 275.4 193 71.5
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 7.8e-72 274.2 188 73.4
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 1.0e-71 273.9 201 72.1
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 5.0e-71 271.6 193 70.5
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 1.5e-70 270.0 207 66.2
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 1.9e-70 269.6 199 68.8
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 3.3e-70 268.9 199 64.3
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 8.0e-69 264.2 195 69.7
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.8e-68 263.1 207 65.2
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 1.8e-68 263.1 198 64.6
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 1.2e-67 260.4 210 60.0
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 1.2e-67 260.4 183 71.6
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 2.6e-67 259.2 191 66.0
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 4.3e-62 241.9 188 67.6
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 7.3e-62 241.1 194 66.5
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 6.8e-60 234.6 123 91.1
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 1.3e-55 220.3 195 55.9
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 4.0e-52 208.8 193 53.9
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 2.6e-51 206.1 203 56.2
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 7.8e-48 194.5 173 60.7
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 1.2e-45 187.2 97 90.7
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 5.2e-44 181.8 97 87.6
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 2.0e-43 179.9 97 85.6
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.7e-42 176.8 193 52.3
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 1.7e-42 176.8 188 49.5
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 5.4e-41 171.8 195 52.8
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 1.1e-38 164.1 191 42.9
CSS0016583 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 7.1e-33 144.8 125 60.8
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 4.6e-32 142.1 81 84.0
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 1.1e-30 137.5 82 80.5
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.8e-23 113.6 58 87.9
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 1.9e-22 110.2 58 84.5
BolC9t53624H Brassica oleracea HOM05D000880 ORTHO05D008158 6.0e-16 88.6 53 77.4
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.8e-15 87.0 193 34.7
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 5.1e-15 85.5 43 88.4
A09p06390 Brassica napus HOM05D000880 ORTHO05D008158 3.3e-14 82.8 53 75.5
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.0e-10 71.2 36 86.1
AagrBONN_evm.TU.Sc2ySwM_117.3790 Anthoceros agrestis HOM05D005695 ORTHO05D007810 3.5e-08 62.8 131 29.0
Glyma.07G122300 Glycine max HOM05D005695 ORTHO05D007810 5.1e-07 58.9 121 30.6
MCO05G350 Micromonas commoda HOM05D005695 ORTHO05D007810 5.1e-07 58.9 131 27.5
ATR0568G060 Amborella trichopoda HOM05D005695 ORTHO05D007810 6.7e-07 58.5 140 28.6
PSO782G5257 Papaver somniferum HOM05D005695 ORTHO05D007810 6.7e-07 58.5 120 32.5
SEGI_31772 Sequoiadendron giganteum HOM05D005695 ORTHO05D007810 6.7e-07 58.5 119 31.9
Mapoly0006s0284 Marchantia polymorpha HOM05D005695 ORTHO05D007810 8.7e-07 58.2 122 28.7
Zm00001eb004570 Zea mays HOM05D005695 ORTHO05D007810 1.5e-06 57.4 119 31.1
Eucgr.D01073 Eucalyptus grandis HOM05D005695 ORTHO05D007810 2.5e-06 56.6 123 32.5
Hma1.2p1_0128F.1_g060080 Hydrangea macrophylla HOM05D005695 ORTHO05D007810 2.5e-06 56.6 141 31.2
ClCG05G002480 Citrullus lanatus HOM05D005695 ORTHO05D007810 3.3e-06 56.2 182 30.2
Cc05_g03930 Coffea canephora HOM05D005695 ORTHO05D007810 4.3e-06 55.8 122 33.6
PSO063G4708 Papaver somniferum HOM05D005695 ORTHO05D007810 4.3e-06 55.8 120 31.7
unitig_22.g5902 Utricularia gibba HOM05D005695 ORTHO05D007810 4.3e-06 55.8 122 31.1
CANSAT54G1451 Cannabis sativa HOM05D005695 ORTHO05D007810 5.7e-06 55.5 141 29.8
Glyma.03G100600 Glycine max HOM05D005695 ORTHO05D007810 5.7e-06 55.5 184 28.3
Os01g0535900 Oryza sativa ssp. japonica HOM05D005695 ORTHO05D007810 5.7e-06 55.5 120 32.5
Duzib177G0357 Durio zibethinus HOM05D005695 ORTHO05D007810 7.4e-06 55.1 119 31.9
HPP92_023786 Vanilla planifolia HOM05D005695 ORTHO05D007810 7.4e-06 55.1 155 30.3
CsaV3_3G009910 Cucumis sativus L. HOM05D005695 ORTHO05D007810 9.7e-06 54.7 182 29.7
Nn7g37385 Nelumbo nucifera HOM05D005695 ORTHO05D007810 9.7e-06 54.7 119 30.3
TAR715G0002 Trochodendron aralioides HOM05D005695 ORTHO05D007810 9.7e-06 54.7 119 28.6


User provided reference genes

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