Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2447 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 3.2e-72 275.0 143 100.0
MBI03_g11900_MAGBIO Magnolia biondii HOM05D005205 ORTHO05D006155 9.7e-61 236.9 142 84.5
THA.LOC104800388 Tarenaya hassleriana HOM05D005205 ORTHO05D006155 7.0e-59 230.7 142 81.0
CiPaw.16G000600 Carya illinoinensis HOM05D005205 ORTHO05D006155 9.1e-59 230.3 142 78.2
QL01p000318 Quercus lobata HOM05D005205 ORTHO05D006155 3.5e-58 228.4 142 77.5
Glyma.20G000300 Glycine max HOM05D005205 ORTHO05D006155 4.5e-58 228.0 142 75.4
Ciclev10015886m.g Citrus clementina HOM05D005205 ORTHO05D006155 7.7e-58 227.3 139 79.9
Glyma.09G286000 Glycine max HOM05D005205 ORTHO05D006155 1.0e-57 226.9 142 76.1
MD16G1004900 Malus domestica HOM05D005205 ORTHO05D006155 1.0e-57 226.9 139 78.4
Prupe.1G351900 Prunus persica HOM05D005205 ORTHO05D006155 1.3e-57 226.5 139 78.4
Dinv17655 Davidia involucrata HOM05D005205 ORTHO05D006155 2.2e-57 225.7 139 79.9
Potri.010G254800 Populus trichocarpa HOM05D005205 ORTHO05D006155 2.2e-57 225.7 142 76.8
Cfa018669 Carpinus fangiana HOM05D001610 ORTHO05D001585 2.9e-57 225.3 134 82.1
Manes.04G160800 Manihot esculenta HOM05D005205 ORTHO05D006155 2.9e-57 225.3 139 77.7
Thecc.02G152000 Theobroma cacao HOM05D005205 ORTHO05D006155 2.9e-57 225.3 142 78.2
COL.COLO4_33151 Corchorus olitorius HOM05D005205 ORTHO05D006155 3.8e-57 224.9 138 80.4
Gohir.D02G191000 Gossypium hirsutum HOM05D005205 ORTHO05D006155 3.8e-57 224.9 142 76.8
Phvul.003G000300 Phaseolus vulgaris HOM05D005205 ORTHO05D006155 5.0e-57 224.6 142 76.8
TWI53G0012 Tripterygium wilfordii HOM05D005205 ORTHO05D006155 5.0e-57 224.6 139 77.0
ATR0124G008 Amborella trichopoda HOM05D005205 ORTHO05D006155 8.5e-57 223.8 139 77.7
Aqoxy3G04336 Aquilegia oxysepala HOM05D005205 ORTHO05D006155 1.1e-56 223.4 142 78.2
MSTRG.2087 Avicennia marina HOM05D005205 ORTHO05D006155 1.5e-56 223.0 142 76.1
Cc11_g00390 Coffea canephora HOM05D005205 ORTHO05D006155 1.5e-56 223.0 139 78.4
FvH4_4g37340 Fragaria vesca HOM05D005205 ORTHO05D006155 1.5e-56 223.0 139 77.7
TAR622G1118 Trochodendron aralioides HOM05D005205 ORTHO05D006155 1.5e-56 223.0 139 77.7
Atru.chr11.38 Acer truncatum HOM05D005205 ORTHO05D006155 1.9e-56 222.6 141 75.2
Actinidia18451 Actinidia chinensis HOM05D005205 ORTHO05D006155 1.9e-56 222.6 142 75.4
ClCG11G012770 Citrullus lanatus HOM05D005205 ORTHO05D006155 1.9e-56 222.6 139 79.1
Gorai.005G213800 Gossypium raimondii HOM05D005205 ORTHO05D006155 1.9e-56 222.6 142 76.1
MD13G1000800 Malus domestica HOM05D005205 ORTHO05D006155 3.2e-56 221.9 139 77.7
PGR044G0613 Punica granatum HOM05D005205 ORTHO05D006155 4.2e-56 221.5 142 76.1
FAN07G0818 Fragaria x ananassa HOM05D005205 ORTHO05D006155 5.5e-56 221.1 139 77.0
Aa31LG3G17990 Aethionema arabicum HOM05D005205 ORTHO05D006155 7.2e-56 220.7 139 77.7
CSS0009404 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 7.2e-56 220.7 134 78.4
CSS0028662 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 7.2e-56 220.7 134 78.4
Duzib248G0811 Durio zibethinus HOM05D005205 ORTHO05D006155 7.2e-56 220.7 142 76.1
HPP92_007317 Vanilla planifolia HOM05D005205 ORTHO05D006155 7.2e-56 220.7 142 75.4
Eucgr.J00330 Eucalyptus grandis HOM05D005205 ORTHO05D006155 9.4e-56 220.3 139 74.1
Oeu006323.1 Olea europaea HOM05D005205 ORTHO05D006155 9.4e-56 220.3 139 76.3
Sabra10G0198100 Salix brachista HOM05D005205 ORTHO05D006155 9.4e-56 220.3 139 77.0
CANSAT78G1147 Cannabis sativa HOM05D005205 ORTHO05D006155 1.6e-55 219.5 133 78.9
Sed0014845 Sechium edule HOM05D005205 ORTHO05D006155 1.6e-55 219.5 139 77.7
Sed0020094 Sechium edule HOM05D005205 ORTHO05D006155 1.6e-55 219.5 141 78.0
VMungo0251G0539 Vigna mungo HOM05D001906 ORTHO05D002083 1.6e-55 219.5 142 73.9
Ca_12345_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 2.1e-55 219.2 139 74.8
Duzib052G0598 Durio zibethinus HOM05D005205 ORTHO05D006155 2.1e-55 219.2 139 77.7
Gohir.A03G167900 Gossypium hirsutum HOM05D005205 ORTHO05D006155 2.1e-55 219.2 142 75.4
FAN17G1859 Fragaria x ananassa HOM05D005205 ORTHO05D006155 2.7e-55 218.8 139 75.5
Os04g0527800 Oryza sativa ssp. japonica HOM05D005205 ORTHO05D006155 2.7e-55 218.8 134 76.9
BcaB08g37247 Brassica carinata HOM05D005205 ORTHO05D006155 3.6e-55 218.4 134 79.1
C09p68390 Brassica napus HOM05D005205 ORTHO05D006155 3.6e-55 218.4 134 79.1
BolC9t59586H Brassica oleracea HOM05D005205 ORTHO05D006155 3.6e-55 218.4 134 79.1
CsaV3_5G029150 Cucumis sativus L. HOM05D005205 ORTHO05D006155 3.6e-55 218.4 139 76.3
SGA_v2.0_scaffold34G13663 Striga asiatica HOM05D005205 ORTHO05D006155 3.6e-55 218.4 142 73.9
GSVIVG01034351001 Vitis vinifera HOM05D005205 ORTHO05D006155 3.6e-55 218.4 141 74.5
AL6G19250 Arabidopsis lyrata HOM05D005205 ORTHO05D006155 4.7e-55 218.0 134 78.4
AT5G08540 Arabidopsis thaliana HOM05D005205 ORTHO05D006155 4.7e-55 218.0 134 78.4
MELO3C011767.2 Cucumis melo HOM05D005205 ORTHO05D006155 4.7e-55 218.0 139 77.7
A10p28180 Brassica napus HOM05D005205 ORTHO05D006155 6.1e-55 217.6 134 79.1
BraA10t44867Z Brassica rapa HOM05D005205 ORTHO05D006155 6.1e-55 217.6 134 79.1
RcHm_v2.0_Chr4g0447201 Rosa chinensis HOM05D005205 ORTHO05D006155 6.1e-55 217.6 143 74.1
DCAR_023495 Daucus carota HOM05D005205 ORTHO05D006155 8.0e-55 217.2 139 77.0
Lalb_Chr04g0259081 Lupinus albus HOM05D005205 ORTHO05D006155 1.4e-54 216.5 142 74.6
Sp6g34350 Schrenkiella parvula HOM05D005205 ORTHO05D006155 1.4e-54 216.5 134 77.6
Haze_17397 Corylus avellana HOM05D005205 ORTHO05D006155 1.8e-54 216.1 167 67.7
Thhalv10013959m.g Eutrema salsugineum HOM05D005205 ORTHO05D006155 1.8e-54 216.1 134 77.6
Lalb_Chr10g0094691 Lupinus albus HOM05D005205 ORTHO05D006155 1.8e-54 216.1 136 76.5
Carub.0006s0750 Capsella rubella HOM05D005205 ORTHO05D006155 2.3e-54 215.7 134 76.9
CARHR204440 Cardamine hirsuta HOM05D005205 ORTHO05D006155 3.0e-54 215.3 133 78.2
Nn3g18536 Nelumbo nucifera HOM05D005205 ORTHO05D006155 3.0e-54 215.3 138 76.1
arahy.Tifrunner.gnm1.ann1.LXEK1C Arachis hypogaea HOM05D005205 ORTHO05D006155 5.2e-54 214.5 135 74.8
Lj3A844T51 Lonicera japonica HOM05D005205 ORTHO05D006155 5.2e-54 214.5 134 76.9
arahy.Tifrunner.gnm1.ann1.JXP1KB Arachis hypogaea HOM05D005205 ORTHO05D006155 1.2e-53 213.4 135 74.1
PSO782G4176 Papaver somniferum HOM05D005205 ORTHO05D006155 1.2e-53 213.4 142 76.1
Sc06g0007780 Simmondsia chinensis HOM05D005205 ORTHO05D006155 1.2e-53 213.4 140 77.1
Ah.01g011460 Amaranthus hybridus HOM05D005205 ORTHO05D006155 1.5e-53 213.0 133 77.4
PSO063G1005 Papaver somniferum HOM05D005205 ORTHO05D006155 2.6e-53 212.2 142 75.4
C03p04410 Brassica napus HOM05D005205 ORTHO05D006155 1.7e-52 209.5 134 75.4
BolC3t12972H Brassica oleracea HOM05D005205 ORTHO05D006155 1.7e-52 209.5 134 75.4
Lj2g0013395 Lotus japonicus HOM05D005205 ORTHO05D006155 3.7e-52 208.4 142 71.1
Nitab4.5_0003034g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 4.8e-52 208.0 139 73.4
AUR62032894 Chenopodium quinoa HOM05D005205 ORTHO05D006155 6.3e-52 207.6 140 72.9
Nitab4.5_0000067g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 1.4e-51 206.5 139 74.1
HanXRQChr04g0099271 Helianthus annuus HOM05D005205 ORTHO05D006155 1.8e-51 206.1 137 73.7
HanXRQChr06g0171581 Helianthus annuus HOM05D005205 ORTHO05D006155 1.8e-51 206.1 133 75.2
AUR62017757 Chenopodium quinoa HOM05D005205 ORTHO05D006155 2.4e-51 205.7 140 72.1
BcaB01g05587 Brassica carinata HOM05D005205 ORTHO05D006155 3.1e-51 205.3 133 74.4
A03p03920 Brassica napus HOM05D005205 ORTHO05D006155 4.1e-51 204.9 134 73.1
Solyc02g049070.4 Solanum lycopersicum HOM05D005205 ORTHO05D006155 4.1e-51 204.9 139 72.7
EL10Ac9g23020 Beta vulgaris HOM05D005205 ORTHO05D006155 7.0e-51 204.1 134 73.1
BraA03t09738Z Brassica rapa HOM05D005205 ORTHO05D006155 7.0e-51 204.1 134 73.1
Sopen02g008300 Solanum pennellii HOM05D005205 ORTHO05D006155 9.1e-51 203.8 139 71.9
Peaxi162Scf00655g00330 Petunia axillaris HOM05D005205 ORTHO05D006155 2.7e-50 202.2 139 71.2
SalBow2G1531 Salvia bowleyana HOM05D005205 ORTHO05D006155 4.5e-50 201.4 139 70.5
ECA246G5176 Erigeron canadensis HOM05D005205 ORTHO05D006155 7.7e-50 200.7 139 69.1
unitig_27.g25294 Utricularia gibba HOM05D005205 ORTHO05D006155 6.5e-49 197.6 143 68.5
Migut.E00589 Erythranthe guttata HOM05D005205 ORTHO05D006155 1.1e-48 196.8 137 69.3
Cpa.g.sc221.15 Carica papaya HOM05D005205 ORTHO05D006155 1.2e-45 186.8 139 69.8
Oeu027937.2 Olea europaea HOM05D005205 ORTHO05D006155 2.2e-44 182.6 216 49.1
Nn1g04118 Nelumbo nucifera HOM05D005205 ORTHO05D006155 6.3e-44 181.0 118 75.4
Mapoly0169s0014 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.1e-43 180.3 141 66.7
Zm00001eb076700 Zea mays HOM05D005205 ORTHO05D006155 2.7e-42 175.6 106 80.2
Pp3c3_33330 Physcomitrium patens HOM05D005205 ORTHO05D006155 1.7e-41 172.9 139 63.3
CBR_g39443 Chara braunii HOM05D005205 ORTHO05D006155 2.5e-40 169.1 139 61.2
SMO367G0125 Selaginella moellendorffii HOM05D005205 ORTHO05D006155 9.5e-40 167.2 134 61.2
Medtr1g039490 Medicago truncatula HOM05D005205 ORTHO05D006155 1.1e-32 143.7 101 69.3
BcaB01g05586 Brassica carinata HOM05D005205 ORTHO05D006155 4.7e-31 138.3 92 73.9
Lsat_1_v5_gn_3_35240 Lactuca sativa HOM05D005205 ORTHO05D006155 3.0e-30 135.6 88 75.0
Hma1.2p1_3386F.1_g335780 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 1.2e-29 133.7 93 69.9
HanXRQChr01g0001451 Helianthus annuus HOM05D005205 ORTHO05D006155 1.2e-26 123.6 88 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2354 Anthoceros agrestis HOM05D005205 ORTHO05D006155 2.0e-26 122.9 87 66.7
Nn7g36511 Nelumbo nucifera HOM05D005205 ORTHO05D006155 2.0e-26 122.9 74 81.1
SEGI_28687 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 4.7e-23 111.7 77 74.0
Cc00_g03890 Coffea canephora HOM05D005205 ORTHO05D006155 1.4e-22 110.2 82 63.4
RcHm_v2.0_Chr6g0263291 Rosa chinensis HOM05D005205 ORTHO05D006155 4.0e-22 108.6 145 42.1
FAN28G1115 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.9e-16 89.7 56 75.0
Mapoly0067s0101 Marchantia polymorpha HOM05D005205 ORTHO05D006155 2.5e-16 89.4 121 40.5
PRCOL_00005587 Prasinoderma coloniale HOM05D005205 ORTHO05D006155 2.5e-16 89.4 133 39.8
vmacro08834 Vaccinium macrocarpon HOM05D005205 ORTHO05D006155 7.3e-16 87.8 56 71.4
SHI21160 Sapria himalayana HOM05D005205 ORTHO05D006155 1.2e-15 87.0 97 55.7
TPR.G30235 Trifolium pratense HOM05D005205 ORTHO05D006155 1.6e-15 86.7 55 70.9
FAN03G0776 Fragaria x ananassa HOM05D005205 ORTHO05D006155 3.6e-15 85.5 55 72.7
Nn5g29101 Nelumbo nucifera HOM05D005205 ORTHO05D006155 3.6e-15 85.5 57 71.9
TPR.G39699 Trifolium pratense HOM05D005205 ORTHO05D006155 3.6e-15 85.5 50 80.0
TPR.G15012 Trifolium pratense HOM05D005205 ORTHO05D006155 1.4e-14 83.6 52 73.1
Mapoly0067s0100 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.8e-14 83.2 119 43.7
RcHm_v2.0_Chr1g0316621 Rosa chinensis HOM05D005205 ORTHO05D006155 1.8e-14 83.2 55 70.9
RcHm_v2.0_Chr3g0483731 Rosa chinensis HOM05D005205 ORTHO05D006155 2.3e-14 82.8 56 67.9
RcHm_v2.0_Chr4g0403031 Rosa chinensis HOM05D005205 ORTHO05D006155 2.6e-13 79.3 57 66.7
Mapoly0067s0102 Marchantia polymorpha HOM05D005205 ORTHO05D006155 5.8e-13 78.2 115 40.0
Rhsim04G0130700 Rhododendron simsii HOM05D005205 ORTHO05D006155 5.4e-11 71.6 54 64.8
FAN01G2591 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.3e-09 67.0 49 65.3
Sabra08G0000800 Salix brachista HOM05D005205 ORTHO05D006155 3.9e-09 65.5 62 53.2
SHI21161 Sapria himalayana HOM05D005205 ORTHO05D006155 3.6e-07 58.9 33 81.8
COL.COLO4_28032 Corchorus olitorius HOM05D001335 ORTHO05D001184 1.8e-06 56.6 46 65.2


User provided reference genes

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