Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1972 Ceratophyllum demersum HOM05D002543 ORTHO05D002990 2.0e-83 312.4 154 100.0
CDE05G2091 Ceratophyllum demersum HOM05D002543 ORTHO05D002990 1.6e-64 249.6 148 87.8
EL10Ac4g07699 Beta vulgaris HOM05D002543 ORTHO05D002990 4.1e-33 145.2 100 66.0
Cfa020368 Carpinus fangiana HOM05D002543 ORTHO05D002990 9.2e-33 144.1 80 80.0
Hund01965 Selenicereus undatus HOM05D002543 ORTHO05D002990 9.2e-33 144.1 95 70.5
Thecc.01G279300 Theobroma cacao HOM05D002543 ORTHO05D002990 9.2e-33 144.1 80 80.0
TWI15G0785 Tripterygium wilfordii HOM05D002543 ORTHO05D002990 9.2e-33 144.1 85 74.1
CANSAT25G3438 Cannabis sativa HOM05D002543 ORTHO05D002990 2.1e-32 142.9 78 80.8
Dinv34752 Davidia involucrata HOM05D002543 ORTHO05D002990 2.1e-32 142.9 86 70.9
Actinidia21113 Actinidia chinensis HOM05D002543 ORTHO05D002990 2.7e-32 142.5 82 74.4
Peaxi162Scf01607g00112 Petunia axillaris HOM05D002543 ORTHO05D002990 2.7e-32 142.5 79 81.0
Rhsim01G0274600 Rhododendron simsii HOM05D002543 ORTHO05D002990 2.7e-32 142.5 80 76.2
Prupe.8G241000 Prunus persica HOM05D002543 ORTHO05D002990 4.6e-32 141.7 78 80.8
Sc21g0006390 Simmondsia chinensis HOM05D002543 ORTHO05D002990 4.6e-32 141.7 94 71.3
arahy.Tifrunner.gnm1.ann1.Y2BFPY Arachis hypogaea HOM05D002543 ORTHO05D002990 6.0e-32 141.4 77 81.8
Sabra05G0159600 Salix brachista HOM05D002543 ORTHO05D002990 6.0e-32 141.4 80 76.2
CiPaw.07G091700 Carya illinoinensis HOM05D002543 ORTHO05D002990 7.8e-32 141.0 78 78.2
Cc01_g19470 Coffea canephora HOM05D002543 ORTHO05D002990 7.8e-32 141.0 80 77.5
Nitab4.5_0008435g0010 Nicotiana tabacum HOM05D002543 ORTHO05D002990 7.8e-32 141.0 79 81.0
Psat6g060080 Pisum sativum HOM05D002543 ORTHO05D002990 7.8e-32 141.0 80 76.2
TAR636G2808 Trochodendron aralioides HOM05D002543 ORTHO05D002990 7.8e-32 141.0 78 79.5
unitig_22.g5260 Utricularia gibba HOM05D002543 ORTHO05D002990 7.8e-32 141.0 84 72.6
CSS0032779 Camellia sinensis var. sinensis HOM05D002543 ORTHO05D002990 1.0e-31 140.6 83 73.5
Nitab4.5_0000458g0020 Nicotiana tabacum HOM05D002543 ORTHO05D002990 1.0e-31 140.6 79 79.7
Medtr1g072260 Medicago truncatula HOM05D002543 ORTHO05D002990 1.3e-31 140.2 79 77.2
arahy.Tifrunner.gnm1.ann1.A738ZF Arachis hypogaea HOM05D002543 ORTHO05D002990 1.7e-31 139.8 77 80.5
Solyc09g065180.3 Solanum lycopersicum HOM05D002543 ORTHO05D002990 1.7e-31 139.8 91 72.5
Sopen09g026890 Solanum pennellii HOM05D002543 ORTHO05D002990 1.7e-31 139.8 91 72.5
Duzib138G1399 Durio zibethinus HOM05D002543 ORTHO05D002990 2.3e-31 139.4 80 77.5
Glyma.10G026600 Glycine max HOM05D002543 ORTHO05D002990 2.3e-31 139.4 79 77.2
Gohir.A08G067200 Gossypium hirsutum HOM05D002543 ORTHO05D002990 2.3e-31 139.4 80 76.2
Gohir.D08G075700 Gossypium hirsutum HOM05D002543 ORTHO05D002990 2.3e-31 139.4 80 76.2
Gorai.004G080000 Gossypium raimondii HOM05D002543 ORTHO05D002990 2.3e-31 139.4 80 76.2
Lj2A1172T39 Lonicera japonica HOM05D002543 ORTHO05D002990 2.3e-31 139.4 84 72.6
Phvul.007G172100 Phaseolus vulgaris HOM05D002543 ORTHO05D002990 2.3e-31 139.4 94 69.1
Potri.002G053000 Populus trichocarpa HOM05D002543 ORTHO05D002990 2.3e-31 139.4 78 76.9
PGSC0003DMG400012888 Solanum tuberosum HOM05D002543 ORTHO05D002990 2.3e-31 139.4 91 72.5
AUR62020347 Chenopodium quinoa HOM05D002543 ORTHO05D002990 3.0e-31 139.0 95 69.5
TPR.G9131 Trifolium pratense HOM05D002543 ORTHO05D002990 3.0e-31 139.0 77 79.2
Atru.chr5.1437 Acer truncatum HOM05D002543 ORTHO05D002990 3.9e-31 138.7 76 80.3
AUR62015876 Chenopodium quinoa HOM05D002543 ORTHO05D002990 3.9e-31 138.7 100 66.0
Glyma.02G147300 Glycine max HOM05D002543 ORTHO05D002990 3.9e-31 138.7 79 75.9
MBI17_g12498_MAGBIO Magnolia biondii HOM05D002543 ORTHO05D002990 5.1e-31 138.3 76 81.6
Lj5g0000370 Lotus japonicus HOM05D002543 ORTHO05D002990 6.6e-31 137.9 79 75.9
Manes.05G076500 Manihot esculenta HOM05D002543 ORTHO05D002990 6.6e-31 137.9 78 75.6
Potri.005G209500 Populus trichocarpa HOM05D002543 ORTHO05D002990 8.6e-31 137.5 80 73.8
ClCG07G000270 Citrullus lanatus HOM05D002543 ORTHO05D002990 1.1e-30 137.1 78 75.6
Ciclev10020449m.g Citrus clementina HOM05D002543 ORTHO05D002990 1.1e-30 137.1 80 73.8
VMungo0720G2235 Vigna mungo HOM05D002543 ORTHO05D002990 1.5e-30 136.7 84 73.8
MELO3C014337.2 Cucumis melo HOM05D002543 ORTHO05D002990 1.9e-30 136.3 76 76.3
Nn1g02227 Nelumbo nucifera HOM05D002543 ORTHO05D002990 1.9e-30 136.3 78 76.9
QL12p021883 Quercus lobata HOM05D002543 ORTHO05D002990 1.9e-30 136.3 76 76.3
A04p00260 Brassica napus HOM05D002543 ORTHO05D002990 2.5e-30 136.0 84 70.2
PSO170G6436 Papaver somniferum HOM05D002543 ORTHO05D002990 2.5e-30 136.0 79 75.9
SGA_v2.0_scaffold1G00473 Striga asiatica HOM05D002543 ORTHO05D002990 2.5e-30 136.0 82 70.7
CsaV3_6G036810 Cucumis sativus L. HOM05D002543 ORTHO05D002990 3.3e-30 135.6 76 75.0
DCAR_018419 Daucus carota HOM05D002543 ORTHO05D002990 3.3e-30 135.6 88 68.2
BraA04t15745Z Brassica rapa HOM05D002543 ORTHO05D002990 4.3e-30 135.2 84 70.2
COL.COLO4_09096 Corchorus olitorius HOM05D002543 ORTHO05D002990 5.6e-30 134.8 80 73.8
PSO302G0164 Papaver somniferum HOM05D002543 ORTHO05D002990 5.6e-30 134.8 78 76.9
BolC4t24540H Brassica oleracea HOM05D002543 ORTHO05D002990 7.3e-30 134.4 84 69.0
CAN.G232.6 Capsicum annuum HOM05D002543 ORTHO05D002990 9.6e-30 134.0 75 80.0
AL5G45980 Arabidopsis lyrata HOM05D002543 ORTHO05D002990 1.2e-29 133.7 80 71.2
C04p30080 Brassica napus HOM05D002543 ORTHO05D002990 1.2e-29 133.7 84 67.9
Aqoxy2G03331 Aquilegia oxysepala HOM05D002543 ORTHO05D002990 1.6e-29 133.3 105 61.9
FvH4_2g23570 Fragaria vesca HOM05D002543 ORTHO05D002990 1.6e-29 133.3 82 70.7
FAN15G2392 Fragaria x ananassa HOM05D002543 ORTHO05D002990 1.6e-29 133.3 82 70.7
FAN20G2681 Fragaria x ananassa HOM05D002543 ORTHO05D002990 1.6e-29 133.3 82 70.7
FAN24G3529 Fragaria x ananassa HOM05D002543 ORTHO05D002990 1.6e-29 133.3 82 70.7
FAN27G3185 Fragaria x ananassa HOM05D002543 ORTHO05D002990 1.6e-29 133.3 82 70.7
MD11G1285100 Malus domestica HOM05D002543 ORTHO05D002990 1.6e-29 133.3 79 75.9
AT3G63140 Arabidopsis thaliana HOM05D002543 ORTHO05D002990 2.1e-29 132.9 80 72.5
Carub.0005s2981 Capsella rubella HOM05D002543 ORTHO05D002990 2.1e-29 132.9 80 72.5
HPP92_010647 Vanilla planifolia HOM05D002543 ORTHO05D002990 2.8e-29 132.5 86 67.4
CARHR173460 Cardamine hirsuta HOM05D002543 ORTHO05D002990 6.2e-29 131.3 80 71.2
RcHm_v2.0_Chr6g0291041 Rosa chinensis HOM05D002543 ORTHO05D002990 6.2e-29 131.3 82 68.3
Cpa.g.sc370.4 Carica papaya HOM05D002543 ORTHO05D002990 8.1e-29 131.0 79 72.2
HPP92_010724 Vanilla planifolia HOM05D002543 ORTHO05D002990 1.1e-28 130.6 86 66.3
MSTRG.21560 Avicennia marina HOM05D002543 ORTHO05D002990 1.8e-28 129.8 124 51.6
Eucgr.H01479 Eucalyptus grandis HOM05D002543 ORTHO05D002990 1.8e-28 129.8 73 78.1
Sabra02G0043100 Salix brachista HOM05D002543 ORTHO05D002990 1.8e-28 129.8 88 68.2
Lsat_1_v5_gn_9_3701 Lactuca sativa HOM05D002543 ORTHO05D002990 2.4e-28 129.4 84 69.0
Migut.D00296 Erythranthe guttata HOM05D002543 ORTHO05D002990 3.1e-28 129.0 131 52.7
Thhalv10006498m.g Eutrema salsugineum HOM05D002543 ORTHO05D002990 3.1e-28 129.0 86 65.1
Lalb_Chr21g0306471 Lupinus albus HOM05D002543 ORTHO05D002990 3.1e-28 129.0 80 68.8
Sp5g00390 Schrenkiella parvula HOM05D002543 ORTHO05D002990 3.1e-28 129.0 84 66.7
PGR119G2486 Punica granatum HOM05D002543 ORTHO05D002990 4.0e-28 128.6 77 72.7
Zm00001eb303350 Zea mays HOM05D002543 ORTHO05D002990 5.2e-28 128.3 76 76.3
Aa31LG10G16980 Aethionema arabicum HOM05D002543 ORTHO05D002990 7.6e-27 124.4 86 62.8
Sed0000935 Sechium edule HOM05D002543 ORTHO05D002990 1.9e-25 119.8 145 44.1
Os07g0212200 Oryza sativa ssp. japonica HOM05D002543 ORTHO05D002990 2.4e-25 119.4 91 61.5
ECA247G0844 Erigeron canadensis HOM05D002543 ORTHO05D002990 4.2e-25 118.6 72 72.2
SMO250G0002 Selaginella moellendorffii HOM05D002543 ORTHO05D002990 3.5e-24 115.5 134 44.8
SMO259G0002 Selaginella moellendorffii HOM05D002543 ORTHO05D002990 1.7e-23 113.2 134 44.0
Pp3c3_30330 Physcomitrium patens HOM05D002543 ORTHO05D002990 3.9e-23 112.1 76 67.1
Mapoly0016s0172 Marchantia polymorpha HOM05D002543 ORTHO05D002990 5.6e-22 108.2 104 54.8
CBR_g28014 Chara braunii HOM05D002543 ORTHO05D002990 8.1e-21 104.4 76 63.2
Ca_09757_v3 Cicer arietinum L. HOM05D002543 ORTHO05D002990 4.6e-16 88.6 86 51.2
AagrBONN_evm.TU.Sc2ySwM_362.2502 Anthoceros agrestis HOM05D002543 ORTHO05D002990 7.9e-16 87.8 79 50.6
MCO05G179 Micromonas commoda HOM05D002543 ORTHO05D002990 3.0e-15 85.9 91 47.3
Sc05g0004790 Simmondsia chinensis HOM05D002543 ORTHO05D002990 6.6e-15 84.7 90 52.2
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 3.3e-14 82.4 76 51.3
SEGI_18443 Sequoiadendron giganteum HOM05D002543 ORTHO05D002990 7.3e-14 81.3 55 67.3
BcaC02g10352 Brassica carinata HOM05D002543 ORTHO05D002990 4.0e-12 75.5 45 64.4
Cre10.g440050 Chlamydomonas reinhardtii HOM05D002543 ORTHO05D002990 1.7e-10 70.1 76 46.1
vmacro14923 Vaccinium macrocarpon HOM05D002543 ORTHO05D002990 7.9e-08 61.2 35 62.9
GSVIVG01011082001 Vitis vinifera HOM05D002543 ORTHO05D002990 4.3e-06 55.5 33 57.6


User provided reference genes

Program Settings