Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1958 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 3.2e-234 814.7 409 100.0
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 1.1e-184 650.2 432 77.3
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 8.9e-184 647.1 445 75.7
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 2.6e-183 645.6 446 75.1
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 4.4e-183 644.8 443 76.1
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 4.4e-183 644.8 446 75.1
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 5.8e-183 644.4 446 75.3
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 7.5e-183 644.0 445 75.3
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 1.7e-182 642.9 446 74.4
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 2.2e-182 642.5 446 75.1
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 6.4e-182 641.0 446 75.1
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 8.3e-182 640.6 446 75.1
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 8.3e-182 640.6 446 74.4
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 1.1e-181 640.2 446 74.7
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 1.9e-181 639.4 446 74.7
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 3.2e-181 638.6 445 74.2
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 3.2e-181 638.6 446 74.2
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 3.2e-181 638.6 446 74.7
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 5.4e-181 637.9 446 74.0
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 5.4e-181 637.9 446 73.8
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 7.1e-181 637.5 446 74.2
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 1.6e-180 636.3 446 74.2
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 1.6e-180 636.3 446 74.0
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 2.1e-180 636.0 473 71.2
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 2.1e-180 636.0 445 74.6
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 2.7e-180 635.6 446 73.8
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 2.7e-180 635.6 446 74.0
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 2.7e-180 635.6 446 74.4
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 2.7e-180 635.6 446 73.1
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 3.5e-180 635.2 445 73.9
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 4.6e-180 634.8 445 73.9
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 4.6e-180 634.8 440 74.5
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 6.0e-180 634.4 443 75.6
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 1.0e-179 633.6 446 73.5
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 1.7e-179 632.9 446 74.2
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 1.7e-179 632.9 446 73.8
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.7e-179 632.9 445 74.6
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 2.3e-179 632.5 446 74.4
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 3.0e-179 632.1 446 73.5
CDE05G1726 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 3.9e-179 631.7 336 96.1
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 3.9e-179 631.7 441 74.6
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 5.1e-179 631.3 445 74.6
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 5.1e-179 631.3 446 72.9
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 6.6e-179 630.9 446 74.0
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 6.6e-179 630.9 446 73.1
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 6.6e-179 630.9 446 73.3
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 6.6e-179 630.9 446 73.8
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 6.6e-179 630.9 446 73.1
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 6.6e-179 630.9 446 73.8
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 8.6e-179 630.6 445 74.4
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 8.6e-179 630.6 446 74.2
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 8.6e-179 630.6 446 73.5
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 8.6e-179 630.6 446 73.5
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.1e-178 630.2 446 73.8
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 1.5e-178 629.8 446 73.8
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 2.5e-178 629.0 446 73.8
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 2.5e-178 629.0 446 73.3
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 5.6e-178 627.9 446 73.5
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 7.3e-178 627.5 443 73.1
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 7.3e-178 627.5 440 73.9
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 7.3e-178 627.5 446 73.8
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 7.3e-178 627.5 446 72.6
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 9.5e-178 627.1 446 73.1
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.2e-177 626.7 443 73.4
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 2.8e-177 625.5 443 73.1
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 2.8e-177 625.5 446 72.2
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 4.7e-177 624.8 443 73.1
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 4.7e-177 624.8 446 72.2
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 1.4e-176 623.2 443 72.9
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 1.4e-176 623.2 443 72.7
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.8e-176 622.9 446 72.0
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 1.8e-176 622.9 437 73.7
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 2.4e-176 622.5 443 72.2
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 3.1e-176 622.1 442 73.5
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 3.1e-176 622.1 443 74.0
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 5.2e-176 621.3 456 70.8
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 6.8e-176 620.9 446 73.1
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 6.8e-176 620.9 446 71.5
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 8.9e-176 620.5 443 72.0
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 1.2e-175 620.2 443 74.0
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 1.5e-175 619.8 440 72.7
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 2.0e-175 619.4 443 72.2
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 2.0e-175 619.4 443 72.2
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 3.4e-175 618.6 446 72.9
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 3.4e-175 618.6 446 72.9
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 4.4e-175 618.2 443 72.2
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 4.4e-175 618.2 443 72.2
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 4.4e-175 618.2 443 72.2
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 5.8e-175 617.8 440 73.4
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 7.6e-175 617.5 443 71.3
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 9.9e-175 617.1 443 71.8
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 9.9e-175 617.1 443 72.0
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 9.9e-175 617.1 443 73.1
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 1.3e-174 616.7 445 71.5
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 1.7e-174 616.3 443 71.8
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 2.2e-174 615.9 443 71.8
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 2.2e-174 615.9 391 79.5
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 2.2e-174 615.9 443 71.6
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 3.8e-174 615.1 442 72.2
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 3.8e-174 615.1 445 70.8
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 1.9e-173 612.8 446 70.6
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 1.8e-168 596.3 446 70.0
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 1.5e-167 593.2 444 69.8
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 2.2e-166 589.3 446 68.8
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 2.4e-165 585.9 446 67.7
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 9.6e-162 573.9 446 68.6
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 9.6e-162 573.9 446 67.9
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 2.1e-161 572.8 446 67.0
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 2.4e-160 569.3 445 66.3
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 9.0e-160 567.4 446 68.4
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 1.7e-158 563.1 446 65.2
unitig_22.g5473 Utricularia gibba HOM05D004629 ORTHO05D006604 1.8e-155 553.1 446 66.4
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 5.1e-147 525.0 347 78.7
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 4.5e-143 511.9 454 59.9
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 6.5e-142 508.1 446 61.7
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 7.7e-127 458.0 451 55.9
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 1.4e-123 447.2 394 62.9
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 3.0e-123 446.0 299 77.3
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 8.2e-121 438.0 453 52.8
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 4.5e-119 432.2 414 63.3
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 6.7e-115 418.3 446 53.8
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 3.7e-113 412.5 256 79.7
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 4.0e-107 392.5 394 56.6
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 3.3e-85 319.7 398 46.2
CDE05G0143 Ceratophyllum demersum HOM05D004629 ORTHO05D019743 9.5e-77 291.6 234 70.1
PRCOL_00001239 Prasinoderma coloniale HOM05D004629 ORTHO05D006604 8.9e-75 285.0 351 46.2
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 6.9e-51 205.7 144 72.2
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 2.0e-50 204.1 177 68.9
Psat2g086560 Pisum sativum HOM05D004629 ORTHO05D002382 4.5e-34 149.8 272 38.2
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 6.5e-25 119.4 121 53.7
Nn7g35985 Nelumbo nucifera HOM05D004629 ORTHO05D019743 1.0e-22 112.1 89 61.8
Psat4g081680 Pisum sativum HOM05D004629 ORTHO05D019743 3.9e-22 110.2 72 73.6
Psat4g081640 Pisum sativum HOM05D004629 ORTHO05D019743 6.7e-22 109.4 78 66.7
BcaB02g11150 Brassica carinata HOM05D004629 ORTHO05D092705 4.1e-19 100.1 53 88.7
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 1.7e-17 94.7 102 53.9
Psat3g007720 Pisum sativum HOM05D004629 ORTHO05D006604 5.5e-16 89.7 98 55.1
AT2G12280 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 7.2e-16 89.4 77 58.4
AT2G12200 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 1.1e-08 65.5 40 72.5
BcaB02g11149 Brassica carinata HOM05D004629 ORTHO05D006604 2.5e-08 64.3 84 46.4
Psat4g161960 Pisum sativum HOM05D001026 ORTHO05D007776 6.7e-06 56.2 41 63.4


User provided reference genes

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