Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1726 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 2.8e-219 765.0 392 100.0
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 2.3e-181 639.0 354 89.3
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 1.2e-180 636.7 354 89.3
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 7.5e-180 634.0 354 88.7
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 9.8e-180 633.6 354 88.4
CDE05G1958 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 2.8e-179 632.1 336 96.1
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 6.3e-179 630.9 354 89.0
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 6.3e-179 630.9 354 88.1
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 8.3e-179 630.6 354 88.4
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 8.3e-179 630.6 393 81.9
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 1.1e-178 630.2 354 87.9
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 1.8e-178 629.4 354 88.1
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 2.4e-178 629.0 354 88.1
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 3.1e-178 628.6 354 88.1
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 3.1e-178 628.6 354 87.9
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 3.1e-178 628.6 354 88.1
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 4.1e-178 628.2 354 87.9
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 5.4e-178 627.9 354 88.1
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 5.4e-178 627.9 354 88.1
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 7.0e-178 627.5 354 87.6
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 7.0e-178 627.5 354 88.1
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 9.2e-178 627.1 354 88.4
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 1.2e-177 626.7 354 88.1
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 1.2e-177 626.7 354 87.9
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 1.2e-177 626.7 354 87.9
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 1.6e-177 626.3 354 88.4
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 1.6e-177 626.3 354 87.6
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 2.0e-177 625.9 354 87.3
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 2.0e-177 625.9 354 87.3
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 3.5e-177 625.2 354 88.4
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 3.5e-177 625.2 354 87.6
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 4.5e-177 624.8 354 88.7
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 5.9e-177 624.4 354 88.1
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 5.9e-177 624.4 354 86.7
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 7.7e-177 624.0 354 87.0
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 7.7e-177 624.0 354 87.6
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 7.7e-177 624.0 354 87.0
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 1.0e-176 623.6 354 88.1
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 1.0e-176 623.6 354 87.3
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 1.3e-176 623.2 354 87.9
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 1.3e-176 623.2 354 87.6
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 1.3e-176 623.2 354 87.6
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 1.7e-176 622.9 354 87.6
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.7e-176 622.9 354 87.6
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 2.3e-176 622.5 354 86.7
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 2.3e-176 622.5 354 87.0
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 2.3e-176 622.5 354 86.4
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 3.8e-176 621.7 354 87.3
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 3.8e-176 621.7 354 87.3
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 5.0e-176 621.3 354 87.0
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 6.6e-176 620.9 354 87.0
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 1.1e-175 620.2 354 86.2
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 1.1e-175 620.2 354 87.9
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 1.1e-175 620.2 354 87.0
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 1.1e-175 620.2 354 87.0
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 1.5e-175 619.8 354 86.2
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 1.5e-175 619.8 354 86.2
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 1.5e-175 619.8 354 86.7
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.9e-175 619.4 354 87.0
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 1.9e-175 619.4 354 85.9
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 2.5e-175 619.0 354 86.2
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 3.3e-175 618.6 354 85.9
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 3.3e-175 618.6 381 82.7
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 4.3e-175 618.2 354 85.6
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 4.3e-175 618.2 354 87.6
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 5.6e-175 617.8 354 86.2
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 5.6e-175 617.8 354 85.9
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 7.3e-175 617.5 354 86.4
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 7.3e-175 617.5 354 86.4
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 9.5e-175 617.1 354 85.3
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 9.5e-175 617.1 354 86.7
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 1.2e-174 616.7 354 87.0
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 1.2e-174 616.7 354 85.9
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 1.2e-174 616.7 354 85.9
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.2e-174 616.7 354 85.6
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 2.1e-174 615.9 354 86.7
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 2.1e-174 615.9 354 86.7
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 3.6e-174 615.1 354 85.3
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 4.7e-174 614.8 354 85.3
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 4.7e-174 614.8 354 85.0
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 4.7e-174 614.8 354 85.0
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 4.7e-174 614.8 354 85.0
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 4.7e-174 614.8 354 85.3
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 6.1e-174 614.4 352 85.5
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 6.1e-174 614.4 354 87.0
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 6.1e-174 614.4 354 87.0
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 8.0e-174 614.0 354 87.0
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 1.4e-173 613.2 354 84.5
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 1.4e-173 613.2 354 84.7
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 1.8e-173 612.8 354 85.0
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 1.8e-173 612.8 364 83.8
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 2.3e-173 612.5 354 85.0
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 2.3e-173 612.5 354 86.2
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 2.3e-173 612.5 354 84.5
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 4.0e-173 611.7 354 84.5
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 4.0e-173 611.7 354 84.5
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 5.2e-173 611.3 354 84.5
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 8.9e-173 610.5 354 84.7
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 8.9e-173 610.5 354 86.2
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 1.3e-171 606.7 354 85.0
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 1.4e-170 603.2 354 83.3
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 5.6e-167 591.3 354 83.1
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 2.3e-165 585.9 354 81.1
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 6.8e-165 584.3 354 82.2
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 7.0e-162 574.3 354 79.4
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 5.0e-160 568.2 354 81.1
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 8.6e-160 567.4 354 80.8
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 9.5e-159 563.9 354 77.7
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 2.3e-157 559.3 354 78.5
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 5.2e-157 558.1 354 77.4
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 3.4e-156 555.4 354 80.5
unitig_22.g5473 Utricularia gibba HOM05D004629 ORTHO05D006604 4.3e-151 538.5 354 77.7
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 3.9e-144 515.4 286 89.5
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 3.6e-142 508.8 361 69.8
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 3.4e-140 502.3 352 71.9
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 2.5e-127 459.5 352 67.0
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 1.1e-122 444.1 354 67.8
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 4.6e-121 438.7 244 88.9
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 2.6e-116 422.9 359 59.3
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 6.5e-115 418.3 331 73.1
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 5.1e-112 408.7 244 82.8
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 8.2e-110 401.4 354 61.3
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 1.6e-105 387.1 354 61.0
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 9.1e-85 318.2 361 49.0
PRCOL_00001239 Prasinoderma coloniale HOM05D004629 ORTHO05D006604 8.5e-83 311.6 370 45.9
CDE05G0143 Ceratophyllum demersum HOM05D004629 ORTHO05D019743 6.7e-80 302.0 203 78.3
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 1.1e-48 198.4 113 84.1
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 2.3e-40 170.6 116 81.9
Psat4g081680 Pisum sativum HOM05D004629 ORTHO05D019743 5.4e-29 132.9 90 72.2
Psat4g081640 Pisum sativum HOM05D004629 ORTHO05D019743 9.2e-29 132.1 90 71.1
Psat2g086560 Pisum sativum HOM05D004629 ORTHO05D002382 1.7e-27 127.9 211 38.9
Nn7g35985 Nelumbo nucifera HOM05D004629 ORTHO05D019743 8.4e-22 109.0 58 84.5
AT2G12280 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 1.0e-19 102.1 58 81.0
BcaB02g11150 Brassica carinata HOM05D004629 ORTHO05D092705 1.0e-19 102.1 53 90.6
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 9.6e-18 95.5 60 76.7
Psat4g161960 Pisum sativum HOM05D001026 ORTHO05D007776 4.5e-15 86.7 59 71.2
AT2G12200 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 2.2e-14 84.3 58 67.2
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 1.3e-09 68.6 41 80.5
Psat3g007720 Pisum sativum HOM05D004629 ORTHO05D006604 3.8e-06 57.0 37 78.4


User provided reference genes

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