Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.7e-310 1067.8 517 100.0
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 8.9e-181 637.5 506 63.6
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 3.0e-176 622.5 501 60.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 3.1e-173 612.5 504 60.7
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.2e-172 610.5 514 59.5
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 4.4e-172 608.6 503 61.8
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 3.8e-171 605.5 499 60.1
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 8.4e-171 604.4 514 58.9
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.1e-169 599.7 503 60.6
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 3.9e-168 595.5 503 60.8
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.9e-167 593.2 499 59.3
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 4.3e-167 592.0 515 58.4
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 3.6e-166 589.0 515 58.3
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.2e-166 588.2 488 59.6
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 8.1e-166 587.8 515 58.1
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.4e-165 587.0 497 60.8
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 4.0e-165 585.5 540 56.7
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 3.4e-164 582.4 500 58.6
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 3.4e-164 582.4 501 57.5
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 4.5e-164 582.0 502 59.0
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.1e-162 577.4 495 59.8
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.9e-162 576.6 500 57.8
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.9e-162 576.6 506 59.7
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 7.1e-162 574.7 491 59.3
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 7.1e-162 574.7 493 58.8
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.6e-161 573.5 511 56.6
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 2.1e-161 573.2 498 57.6
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.7e-161 572.8 480 61.0
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.3e-160 570.5 504 56.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.8e-160 570.1 498 58.0
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 6.7e-160 568.2 506 58.1
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 6.7e-160 568.2 509 57.6
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 1.9e-159 566.6 502 56.6
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 1.6e-158 563.5 516 55.8
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 6.2e-158 561.6 514 55.8
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.1e-157 560.8 503 56.7
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 1.4e-157 560.5 505 57.0
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 2.4e-157 559.7 502 55.2
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 4.0e-157 558.9 513 55.9
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 4.0e-157 558.9 511 55.6
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 2.0e-156 556.6 508 56.5
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 3.4e-156 555.8 490 57.8
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 4.5e-156 555.4 513 56.3
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 5.8e-156 555.1 511 55.2
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 4.9e-155 552.0 520 55.6
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 4.9e-155 552.0 508 56.1
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.1e-154 550.8 501 54.7
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.4e-154 550.4 513 55.8
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.4e-154 550.4 515 55.1
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 7.1e-154 548.1 504 55.8
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.6e-153 547.0 511 55.0
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.3e-152 543.9 508 56.7
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.8e-152 543.5 505 55.0
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 2.3e-152 543.1 503 54.3
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 3.9e-152 542.3 502 56.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.1e-152 542.0 503 55.3
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 5.1e-152 542.0 503 56.3
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.9e-151 540.0 511 54.8
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.3e-151 538.9 489 56.6
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 2.8e-150 536.2 508 54.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 3.7e-150 535.8 503 54.3
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 6.2e-150 535.0 502 56.4
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.4e-149 533.9 503 56.9
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 3.1e-149 532.7 533 53.8
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 4.0e-149 532.3 504 55.6
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 5.3e-149 531.9 504 56.2
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 6.9e-149 531.6 503 54.7
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 2.6e-148 529.6 492 57.7
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 2.6e-148 529.6 501 55.5
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 7.6e-148 528.1 504 54.6
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 7.6e-148 528.1 504 54.6
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.2e-147 526.6 516 53.3
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 8.4e-147 524.6 503 53.3
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.5e-146 523.1 504 55.2
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 4.2e-146 522.3 507 54.4
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 7.1e-146 521.5 501 54.1
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 2.7e-145 519.6 510 53.1
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 6.0e-145 518.5 502 55.0
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 6.0e-145 518.5 471 56.9
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.8e-144 516.9 464 55.8
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 2.3e-144 516.5 508 53.0
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 8.7e-144 514.6 463 55.5
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 1.5e-143 513.8 468 56.6
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.9e-143 513.5 506 53.0
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.9e-143 513.5 515 51.7
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.9e-143 513.5 505 53.5
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 2.5e-143 513.1 502 52.8
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.1e-141 507.7 502 51.8
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.1e-141 506.1 433 58.4
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 4.5e-140 502.3 518 53.5
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.9e-138 496.9 430 59.5
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.8e-136 490.3 526 51.3
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 5.1e-136 488.8 518 51.5
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 3.7e-134 482.6 473 53.7
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 5.9e-132 475.3 509 50.1
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 7.4e-127 458.4 500 51.0
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 6.3e-126 455.3 452 53.8
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 3.0e-120 436.4 555 43.8
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 3.7e-118 429.5 548 43.8
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.1e-114 417.9 511 44.6
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 6.1e-113 412.1 430 52.6
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.5e-108 396.0 325 60.9
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 2.3e-104 383.6 505 44.0
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.4e-96 357.8 439 45.8
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.1e-93 348.2 359 51.0
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.6e-92 344.4 476 42.6
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 1.6e-89 334.3 289 59.2
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.4e-85 321.2 327 52.6
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 2.3e-83 313.9 502 40.2
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 5.8e-71 272.7 302 48.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 4.6e-60 236.5 370 37.3
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.3e-59 234.2 143 74.1
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 3.9e-59 233.4 404 33.7
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.9e-53 214.5 318 43.1
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 8.1e-49 199.1 797 24.3
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 2.5e-37 161.0 351 30.2
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.5e-29 133.3 95 62.1
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.1e-28 131.3 114 57.0
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 3.4e-23 114.0 137 49.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.2e-22 111.3 72 69.4
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.4e-13 79.3 126 36.5
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 4.5e-07 60.5 60 46.7


User provided reference genes

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