Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1525 Ceratophyllum demersum HOM05D002474 ORTHO05D007142 4.2e-150 534.6 264 100.0
Hma1.2p1_0157F.1_g069230 Hydrangea macrophylla HOM05D002474 ORTHO05D007142 1.1e-30 137.9 103 65.0
Ah.08g218030 Amaranthus hybridus HOM05D000912 ORTHO05D001232 3.6e-29 132.9 103 61.2
unitig_82.g27138 Utricularia gibba HOM05D002474 ORTHO05D007142 4.8e-29 132.5 110 61.8
EL10Ac7g18100 Beta vulgaris HOM05D002474 ORTHO05D007142 8.1e-29 131.7 103 63.1
Hund06555 Selenicereus undatus HOM05D002474 ORTHO05D007142 8.1e-29 131.7 103 62.1
MBI03_g28951_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D007142 1.4e-28 131.0 101 63.4
GSVIVG01018503001 Vitis vinifera HOM05D002474 ORTHO05D007142 1.4e-28 131.0 104 62.5
RcHm_v2.0_Chr5g0034601 Rosa chinensis HOM05D002474 ORTHO05D007142 2.4e-28 130.2 104 62.5
CANSAT01G1519 Cannabis sativa HOM05D002474 ORTHO05D007142 4.0e-28 129.4 86 70.9
Medtr4g134500 Medicago truncatula HOM05D002474 ORTHO05D007142 4.0e-28 129.4 86 70.9
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 4.0e-28 129.4 86 69.8
Prupe.5G038000 Prunus persica HOM05D002474 ORTHO05D007142 4.0e-28 129.4 132 53.0
Sabra01G0175800 Salix brachista HOM05D002474 ORTHO05D007142 4.0e-28 129.4 86 69.8
CSS0044346 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D007142 5.3e-28 129.0 115 57.4
FAN16G1529 Fragaria x ananassa HOM05D002474 ORTHO05D007142 5.3e-28 129.0 86 72.1
FAN21G2400 Fragaria x ananassa HOM05D002474 ORTHO05D007142 5.3e-28 129.0 86 72.1
Peaxi162Scf00071g00020 Petunia axillaris HOM05D002474 ORTHO05D007142 5.3e-28 129.0 86 69.8
SalBow4G0251 Salvia bowleyana HOM05D002474 ORTHO05D007142 5.3e-28 129.0 101 63.4
Atru.chr6.88 Acer truncatum HOM05D002474 ORTHO05D007142 6.9e-28 128.6 86 72.1
MELO3C016437.2 Cucumis melo HOM05D002474 ORTHO05D007142 6.9e-28 128.6 101 63.4
PGR142G0374 Punica granatum HOM05D002474 ORTHO05D007142 6.9e-28 128.6 167 44.9
Ca_13520_v3 Cicer arietinum L. HOM05D002474 ORTHO05D007142 1.2e-27 127.9 86 69.8
CsaV3_3G006770 Cucumis sativus L. HOM05D002474 ORTHO05D007142 1.2e-27 127.9 101 63.4
FAN11G0845 Fragaria x ananassa HOM05D002474 ORTHO05D007142 1.2e-27 127.9 86 70.9
Lj4g0011201 Lotus japonicus HOM05D002474 ORTHO05D007142 1.2e-27 127.9 165 45.5
MD04G1042800 Malus domestica HOM05D002474 ORTHO05D007142 1.2e-27 127.9 132 52.3
Manes.06G014900 Manihot esculenta HOM05D002474 ORTHO05D007142 1.2e-27 127.9 86 70.9
TPR.G5978 Trifolium pratense HOM05D002474 ORTHO05D007142 1.2e-27 127.9 86 69.8
Zm00001eb119500 Zea mays HOM05D002474 ORTHO05D007142 1.2e-27 127.9 86 69.8
AUR62025683 Chenopodium quinoa HOM05D002474 ORTHO05D007142 1.5e-27 127.5 103 62.1
Eucgr.L00744 Eucalyptus grandis HOM05D002474 ORTHO05D007142 1.5e-27 127.5 103 60.2
Aqoxy6G02786 Aquilegia oxysepala HOM05D002474 ORTHO05D007142 2.0e-27 127.1 110 59.1
AUR62001301 Chenopodium quinoa HOM05D002474 ORTHO05D007142 2.0e-27 127.1 103 61.2
Migut.B00704 Erythranthe guttata HOM05D002474 ORTHO05D007142 2.0e-27 127.1 119 55.5
Lj5A306G48 Lonicera japonica HOM05D002474 ORTHO05D007142 2.0e-27 127.1 86 68.6
Nitab4.5_0000935g0010 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.0e-27 127.1 86 68.6
Glyma.07G271300 Glycine max HOM05D002474 ORTHO05D007142 2.6e-27 126.7 86 70.9
SGA_v2.0_scaffold254G45227 Striga asiatica HOM05D002474 ORTHO05D007142 3.4e-27 126.3 107 58.9
Nn6g34097 Nelumbo nucifera HOM05D002474 ORTHO05D007142 4.5e-27 125.9 101 61.4
Phvul.003G090600 Phaseolus vulgaris HOM05D002474 ORTHO05D007142 4.5e-27 125.9 86 69.8
QL02p103729 Quercus lobata HOM05D002474 ORTHO05D007142 4.5e-27 125.9 86 68.6
MSTRG.16457 Avicennia marina HOM05D002474 ORTHO05D007142 5.8e-27 125.6 101 61.4
ClCG10G007610 Citrullus lanatus HOM05D002474 ORTHO05D007142 5.8e-27 125.6 101 62.4
ECA246G2471 Erigeron canadensis HOM05D002474 ORTHO05D007142 5.8e-27 125.6 119 54.6
HanXRQChr12g0367101 Helianthus annuus HOM05D002474 ORTHO05D007142 5.8e-27 125.6 119 54.6
Psat0s2555g0320 Pisum sativum HOM05D002474 ORTHO05D007142 5.8e-27 125.6 86 68.6
Potri.004G230600 Populus trichocarpa HOM05D002474 ORTHO05D007142 5.8e-27 125.6 86 68.6
Sed0015094 Sechium edule HOM05D002474 ORTHO05D007142 5.8e-27 125.6 101 64.4
Duzib268G0482 Durio zibethinus HOM05D002474 ORTHO05D007142 7.6e-27 125.2 86 69.8
Lalb_Chr18g0047541 Lupinus albus HOM05D002474 ORTHO05D007142 9.9e-27 124.8 86 68.6
HPP92_023931 Vanilla planifolia HOM05D002474 ORTHO05D007142 9.9e-27 124.8 86 69.8
ATR0041G021 Amborella trichopoda HOM05D002474 ORTHO05D007142 1.3e-26 124.4 101 59.4
Haze_09959 Corylus avellana HOM05D002474 ORTHO05D007142 1.3e-26 124.4 87 69.0
Actinidia11725 Actinidia chinensis HOM05D002474 ORTHO05D007142 1.7e-26 124.0 86 68.6
Lsat_1_v5_gn_9_123041 Lactuca sativa HOM05D002474 ORTHO05D007142 1.7e-26 124.0 119 55.5
PSO339G3087 Papaver somniferum HOM05D002474 ORTHO05D007142 1.7e-26 124.0 100 60.0
Solyc10g005910.2 Solanum lycopersicum HOM05D002474 ORTHO05D007142 1.7e-26 124.0 86 66.3
Sopen10g001870 Solanum pennellii HOM05D002474 ORTHO05D007142 1.7e-26 124.0 86 66.3
PGSC0003DMG400014407 Solanum tuberosum HOM05D002474 ORTHO05D007142 1.7e-26 124.0 86 66.3
CAN.G492.43 Capsicum annuum HOM05D002474 ORTHO05D007142 2.2e-26 123.6 86 66.3
Oeu000165.2 Olea europaea HOM05D002474 ORTHO05D007142 2.2e-26 123.6 86 67.4
Sc10g0008100 Simmondsia chinensis HOM05D002474 ORTHO05D007142 2.2e-26 123.6 103 60.2
Thecc.06G063000 Theobroma cacao HOM05D002474 ORTHO05D007142 2.2e-26 123.6 86 69.8
Cc02_g23800 Coffea canephora HOM05D002474 ORTHO05D007142 2.9e-26 123.2 96 62.5
AL7G50170 Arabidopsis lyrata HOM05D002474 ORTHO05D007142 3.8e-26 122.9 108 57.4
AT5G39960 Arabidopsis thaliana HOM05D002474 ORTHO05D007142 3.8e-26 122.9 108 57.4
Carub.0007s3576 Capsella rubella HOM05D002474 ORTHO05D007142 3.8e-26 122.9 108 57.4
Thhalv10027686m.g Eutrema salsugineum HOM05D002474 ORTHO05D007142 3.8e-26 122.9 108 57.4
TWI14G0213 Tripterygium wilfordii HOM05D002474 ORTHO05D007142 6.4e-26 122.1 86 66.3
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 8.4e-26 121.7 108 58.3
CARHR262220 Cardamine hirsuta HOM05D002474 ORTHO05D007142 8.4e-26 121.7 108 57.4
HPP92_023952 Vanilla planifolia HOM05D002474 ORTHO05D007142 8.4e-26 121.7 86 67.4
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 1.1e-25 121.3 108 58.3
BraA04t16929Z Brassica rapa HOM05D002474 ORTHO05D007142 1.1e-25 121.3 108 58.3
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 1.9e-25 120.6 108 58.3
BolC4t26229H Brassica oleracea HOM05D002474 ORTHO05D007142 1.9e-25 120.6 108 58.3
FvH4_4g04950 Fragaria vesca HOM05D002474 ORTHO05D007142 2.4e-25 120.2 86 69.8
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 2.4e-25 120.2 86 69.8
Sp7g02120 Schrenkiella parvula HOM05D002474 ORTHO05D007142 2.4e-25 120.2 108 56.5
Aa31LG9G1650 Aethionema arabicum HOM05D002474 ORTHO05D007142 7.1e-25 118.6 108 55.6
vmacro01627 Vaccinium macrocarpon HOM05D002474 ORTHO05D007142 1.2e-24 117.9 102 55.9
Gohir.D11G328800 Gossypium hirsutum HOM05D002474 ORTHO05D007142 2.7e-24 116.7 86 64.0
Gorai.007G360100 Gossypium raimondii HOM05D002474 ORTHO05D007142 2.7e-24 116.7 86 64.0
VMungo1215G1553 Vigna mungo HOM05D002474 ORTHO05D007142 4.6e-24 115.9 86 65.1
SHI11365 Sapria himalayana HOM05D002474 ORTHO05D007142 1.3e-23 114.4 86 61.6
PSO170G2680 Papaver somniferum HOM05D002474 ORTHO05D007142 3.9e-23 112.8 100 55.0
Gohir.A11G312300 Gossypium hirsutum HOM05D002474 ORTHO05D007142 8.7e-23 111.7 86 61.6
SEGI_11681 Sequoiadendron giganteum HOM05D002474 ORTHO05D007142 1.1e-22 111.3 86 62.8
Psat0s2506g0040 Pisum sativum HOM05D002474 ORTHO05D007142 1.9e-22 110.5 87 60.9
Glyma.17G002702 Glycine max HOM05D002474 ORTHO05D007142 7.4e-22 108.6 78 67.9
arahy.Tifrunner.gnm1.ann1.W79BEX Arachis hypogaea HOM05D002474 ORTHO05D007142 4.5e-19 99.4 93 54.8
arahy.Tifrunner.gnm1.ann1.1P8C08 Arachis hypogaea HOM05D002474 ORTHO05D007142 5.8e-19 99.0 93 54.8
Cpa.g.sc2.182 Carica papaya HOM05D002474 ORTHO05D007142 2.2e-18 97.1 78 60.3
COL.COLO4_31096 Corchorus olitorius HOM05D002474 ORTHO05D007142 2.2e-18 97.1 92 54.3
Pp3c21_12090 Physcomitrium patens HOM05D002474 ORTHO05D007142 3.5e-16 89.7 86 51.2
Rhsim11G0114900 Rhododendron simsii HOM05D002474 ORTHO05D007142 7.9e-16 88.6 148 36.5
GSVIVG01023124001 Vitis vinifera HOM05D002474 ORTHO05D007142 1.0e-15 88.2 61 65.6
Mapoly0007s0284 Marchantia polymorpha HOM05D002474 ORTHO05D007142 6.3e-13 79.0 88 47.7
Mapoly0252s0004 Marchantia polymorpha HOM05D002474 ORTHO05D007142 6.3e-13 79.0 88 47.7
CBR_g2954 Chara braunii HOM05D002474 ORTHO05D007142 1.2e-11 74.7 89 43.8
Psat0s6195g0040 Pisum sativum HOM05D002474 ORTHO05D007142 1.2e-11 74.7 59 61.0
SMO172G0210 Selaginella moellendorffii HOM05D002474 ORTHO05D007142 4.5e-11 72.8 82 40.2
Psat0s5834g0040 Pisum sativum HOM05D002474 ORTHO05D007142 7.6e-11 72.0 59 59.3
DCAR_001870 Daucus carota HOM05D002474 ORTHO05D007142 1.3e-10 71.2 38 78.9
Cfa004418 Carpinus fangiana HOM05D000259 ORTHO05D000155 1.7e-10 70.9 39 76.9
Hma1.2p1_0157F.1_g069220 Hydrangea macrophylla HOM05D002474 ORTHO05D007142 1.9e-09 67.4 41 70.7
Dinv30985 Davidia involucrata HOM05D002474 ORTHO05D007142 2.5e-09 67.0 71 50.7
Nitab4.5_0002158g0280 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.1e-08 63.9 53 60.4
Cfa004419 Carpinus fangiana HOM05D002474 ORTHO05D007142 6.1e-08 62.4 41 68.3
CiPaw.05G000700 Carya illinoinensis HOM05D002474 ORTHO05D007142 6.1e-08 62.4 99 39.4
SHI11364 Sapria himalayana HOM05D002474 ORTHO05D007142 6.1e-08 62.4 43 69.8
Actinidia00137 Actinidia chinensis HOM05D002474 ORTHO05D007142 1.0e-07 61.6 36 75.0
Ciclev10001219m.g Citrus clementina HOM05D002474 ORTHO05D007142 1.0e-07 61.6 45 62.2
Nitab4.5_0001031g0150 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.0e-07 61.6 36 75.0
FvH4_3g20580 Fragaria vesca HOM05D002474 ORTHO05D007142 8.7e-07 58.5 43 58.1
A10p06280 Brassica napus HOM05D002474 ORTHO05D007142 1.5e-06 57.8 45 60.0
Nitab4.5_0002158g0290 Nicotiana tabacum HOM05D002474 ORTHO05D007142 1.5e-06 57.8 74 43.2
FAN25G2389 Fragaria x ananassa HOM05D002474 ORTHO05D007142 3.3e-06 56.6 43 55.8
BcaC05g26122 Brassica carinata HOM05D002474 ORTHO05D007142 7.4e-06 55.5 45 57.8
BolC5t30798H Brassica oleracea HOM05D002474 ORTHO05D007142 7.4e-06 55.5 45 57.8
BolC8t48411H Brassica oleracea HOM05D002474 ORTHO05D007142 9.7e-06 55.1 45 57.8
SEGI_36950 Sequoiadendron giganteum HOM05D002474 ORTHO05D007142 9.7e-06 55.1 39 64.1


User provided reference genes

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