Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1425 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 0.0e+00 1541.9 898 100.0
CDE05G1820 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 0.0e+00 1415.2 935 88.3
Dinv11756 Davidia involucrata HOM05D003986 ORTHO05D004916 8.3e-251 870.9 989 55.3
Nn4g24477 Nelumbo nucifera HOM05D003986 ORTHO05D004916 2.5e-247 859.4 973 56.4
Gohir.A03G112200 Gossypium hirsutum HOM05D003986 ORTHO05D004916 1.1e-242 844.0 948 57.6
Ciclev10014076m.g Citrus clementina HOM05D003986 ORTHO05D004916 4.6e-241 838.6 972 55.2
Lj3C862T8 Lonicera japonica HOM05D003986 ORTHO05D004916 6.0e-241 838.2 973 53.6
QL03p038358 Quercus lobata HOM05D003986 ORTHO05D004916 6.6e-240 834.7 989 54.0
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 4.3e-239 832.0 979 52.7
Haze_08333 Corylus avellana HOM05D003986 ORTHO05D004916 5.6e-239 831.6 985 55.0
Gorai.005G152800 Gossypium raimondii HOM05D003986 ORTHO05D004916 1.6e-238 830.1 956 56.5
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 8.1e-238 827.8 978 52.2
Manes.17G086100 Manihot esculenta HOM05D003986 ORTHO05D004916 5.2e-237 825.1 986 54.5
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 9.9e-236 820.8 963 52.3
GSVIVG01011619001 Vitis vinifera HOM05D003986 ORTHO05D004916 1.7e-235 820.1 928 54.4
Potri.019G054600 Populus trichocarpa HOM05D003986 ORTHO05D004916 4.2e-234 815.5 978 53.8
CANSAT78G0669 Cannabis sativa HOM05D003986 ORTHO05D004916 5.4e-234 815.1 969 54.6
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 6.6e-232 808.1 956 52.8
MELO3C005265.2 Cucumis melo HOM05D003986 ORTHO05D004916 1.9e-231 806.6 984 53.5
TWI74G0603 Tripterygium wilfordii HOM05D003986 ORTHO05D004916 1.6e-230 803.5 986 51.6
CsaV3_5G027880 Cucumis sativus L. HOM05D003986 ORTHO05D004916 2.8e-230 802.7 984 52.6
CiPaw.06G055800 Carya illinoinensis HOM05D003986 ORTHO05D004916 3.6e-230 802.4 989 52.2
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 3.6e-230 802.4 983 50.1
CSS0009129 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 8.1e-230 801.2 1004 52.5
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 1.8e-229 800.0 941 51.0
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 1.8e-229 800.0 966 50.5
MD09G1258800 Malus domestica HOM05D003986 ORTHO05D004916 1.8e-229 800.0 983 52.7
Phvul.002G324500 Phaseolus vulgaris HOM05D003986 ORTHO05D004916 5.3e-229 798.5 961 52.7
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 6.9e-229 798.1 968 50.4
COL.COLO4_06656 Corchorus olitorius HOM05D003986 ORTHO05D004916 9.0e-229 797.7 931 61.2
Aqoxy3G04028 Aquilegia oxysepala HOM05D003986 ORTHO05D004916 4.5e-228 795.4 956 51.9
Thecc.02G306600 Theobroma cacao HOM05D003986 ORTHO05D004916 9.9e-228 794.3 932 56.3
ClCG01G006690 Citrullus lanatus HOM05D003986 ORTHO05D004916 1.3e-227 793.9 985 52.3
Atru.chr11.800 Acer truncatum HOM05D003986 ORTHO05D004916 1.7e-227 793.5 991 53.2
Ah.02g127910 Amaranthus hybridus HOM05D003986 ORTHO05D004916 2.2e-227 793.1 969 51.9
Glyma.08G048400 Glycine max HOM05D003986 ORTHO05D004916 1.1e-226 790.8 966 52.4
AUR62014146 Chenopodium quinoa HOM05D003986 ORTHO05D004916 1.9e-226 790.0 956 57.3
Migut.E00504 Erythranthe guttata HOM05D003986 ORTHO05D004916 1.9e-226 790.0 936 53.8
DCAR_026811 Daucus carota HOM05D003986 ORTHO05D004916 4.2e-226 788.9 1016 50.7
Lj4g0022556 Lotus japonicus HOM05D003986 ORTHO05D004916 7.1e-226 788.1 971 53.1
Cpa.g.sc2.153 Carica papaya HOM05D003986 ORTHO05D004916 9.3e-226 787.7 1027 53.1
Prupe.3G150800 Prunus persica HOM05D003986 ORTHO05D004916 1.6e-225 786.9 972 52.6
VMungo0251G0132 Vigna mungo HOM05D003986 ORTHO05D004916 2.3e-224 783.1 969 51.7
Psat7g004480 Pisum sativum HOM05D003986 ORTHO05D004916 3.0e-224 782.7 962 51.6
Ca_17244_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 5.1e-224 781.9 977 52.0
Ca_29522_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 5.1e-224 781.9 977 52.0
Lalb_Chr05g0222051 Lupinus albus HOM05D003986 ORTHO05D004916 4.3e-223 778.9 981 51.9
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 1.3e-222 777.3 955 50.2
HPP92_004743 Vanilla planifolia HOM05D003986 ORTHO05D004916 1.3e-222 777.3 959 51.5
SalBow2G1878 Salvia bowleyana HOM05D003986 ORTHO05D004916 8.1e-222 774.6 937 52.3
CSS0026713 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 4.0e-221 772.3 983 52.0
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 4.0e-221 772.3 976 50.3
Sabra13G0078400 Salix brachista HOM05D003986 ORTHO05D004916 6.9e-221 771.5 958 52.9
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 9.0e-221 771.2 921 52.8
Nitab4.5_0004735g0030 Nicotiana tabacum HOM05D003986 ORTHO05D004916 2.6e-220 769.6 959 50.4
AUR62038486 Chenopodium quinoa HOM05D003986 ORTHO05D004916 3.4e-220 769.2 924 55.7
Lalb_Chr16g0387401 Lupinus albus HOM05D003986 ORTHO05D004916 7.6e-220 768.1 966 51.2
Nitab4.5_0000011g0120 Nicotiana tabacum HOM05D003986 ORTHO05D004916 2.2e-219 766.5 959 51.3
TAR629G0821 Trochodendron aralioides HOM05D003986 ORTHO05D004916 2.2e-219 766.5 778 58.5
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea HOM05D003986 ORTHO05D004916 4.9e-219 765.4 987 52.9
Oeu006345.3 Olea europaea HOM05D003986 ORTHO05D004916 9.3e-218 761.1 913 53.5
ECA246G1343 Erigeron canadensis HOM05D003986 ORTHO05D004916 1.2e-217 760.8 939 54.4
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea HOM05D003986 ORTHO05D004916 1.9e-215 753.4 1011 51.6
Dinv14386 Davidia involucrata HOM05D003986 ORTHO05D004916 5.6e-215 751.9 951 51.6
TPR.G12867 Trifolium pratense HOM05D003986 ORTHO05D004916 2.8e-214 749.6 957 51.0
unitig_8.g4016 Utricularia gibba HOM05D003986 ORTHO05D004916 3.7e-214 749.2 908 50.8
Medtr8g106090 Medicago truncatula HOM05D003986 ORTHO05D004916 3.1e-213 746.1 963 51.3
Sc14g0006590 Simmondsia chinensis HOM05D003986 ORTHO05D004916 4.0e-213 745.7 918 50.5
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 2.6e-212 743.0 950 57.2
EL10Ac6g14201 Beta vulgaris HOM05D003986 ORTHO05D004916 5.8e-212 741.9 966 51.4
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 5.8e-212 741.9 975 48.8
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 4.9e-211 738.8 934 55.6
HanXRQChr12g0381871 Helianthus annuus HOM05D003986 ORTHO05D004916 8.4e-211 738.0 920 53.8
A08p26750 Brassica napus HOM05D003986 ORTHO05D004916 2.5e-210 736.5 934 52.7
Sopen05g014610 Solanum pennellii HOM05D003986 ORTHO05D004916 7.1e-210 734.9 955 51.2
Solyc05g017890.4 Solanum lycopersicum HOM05D003986 ORTHO05D004916 9.3e-210 734.6 954 51.0
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 2.7e-209 733.0 956 48.7
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 7.9e-209 731.5 939 55.0
SGA_v2.0_scaffold3G01767 Striga asiatica HOM05D003986 ORTHO05D004916 7.9e-209 731.5 930 51.6
THA.LOC104807876 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 5.1e-208 728.8 946 50.5
RcHm_v2.0_Chr4g0442311 Rosa chinensis HOM05D003986 ORTHO05D004916 2.1e-206 723.4 969 54.1
BraA08t34620Z Brassica rapa HOM05D003986 ORTHO05D004916 2.0e-204 716.8 940 51.2
FvH4_4g33200 Fragaria vesca HOM05D003986 ORTHO05D004916 5.9e-204 715.3 962 54.5
FAN17G2354 Fragaria x ananassa HOM05D003986 ORTHO05D004916 1.3e-203 714.1 959 54.5
Aa31LG7G9380 Aethionema arabicum HOM05D003986 ORTHO05D004916 1.7e-203 713.8 947 53.1
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 2.9e-203 713.0 960 50.2
FAN22G0296 Fragaria x ananassa HOM05D003986 ORTHO05D004916 5.0e-203 712.2 960 54.7
CARHR026420 Cardamine hirsuta HOM05D003986 ORTHO05D004916 8.5e-203 711.4 918 57.1
FAN07G2168 Fragaria x ananassa HOM05D003986 ORTHO05D004916 8.5e-203 711.4 960 51.2
FAN12G0920 Fragaria x ananassa HOM05D003986 ORTHO05D004916 5.5e-202 708.8 960 54.5
THA.LOC104825570 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 4.6e-201 705.7 939 57.9
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 1.4e-197 694.1 944 50.4
AT1G24706 Arabidopsis thaliana HOM05D003986 ORTHO05D004916 6.5e-195 685.3 945 48.8
AL1G40240 Arabidopsis lyrata HOM05D003986 ORTHO05D004916 1.8e-192 677.2 947 48.6
Carub.0001s2544 Capsella rubella HOM05D003986 ORTHO05D004916 6.9e-189 665.2 934 48.7
BcaB03g12045 Brassica carinata HOM05D003986 ORTHO05D004916 1.0e-187 661.4 909 47.7
Zm00001eb156750 Zea mays HOM05D003986 ORTHO05D004916 1.3e-182 644.4 898 47.4
Gohir.D02G136766 Gossypium hirsutum HOM05D003986 ORTHO05D004916 4.1e-181 639.4 837 53.2
Lsat_1_v5_gn_3_102381 Lactuca sativa HOM05D003986 ORTHO05D004916 2.3e-168 597.0 452 69.2
CAN.G71.2 Capsicum annuum HOM05D003986 ORTHO05D004916 4.4e-167 592.8 444 70.3
Os01g0916800 Oryza sativa ssp. japonica HOM05D003986 ORTHO05D004916 1.7e-158 564.3 940 42.0
AagrBONN_evm.TU.Sc2ySwM_117.1912 Anthoceros agrestis HOM05D003986 ORTHO05D004916 3.7e-158 563.1 1065 41.6
Mapoly0001s0369 Marchantia polymorpha HOM05D003986 ORTHO05D004916 5.7e-151 539.3 1085 38.7
Pp3c11_17570 Physcomitrium patens HOM05D003986 ORTHO05D004916 9.8e-151 538.5 809 45.4
BcaC05g26698 Brassica carinata HOM05D003986 ORTHO05D004916 1.4e-149 534.6 894 42.2
Hund24923 Selenicereus undatus HOM05D003986 ORTHO05D004916 3.2e-141 506.9 445 63.8
SMO145G0041 Selaginella moellendorffii HOM05D003986 ORTHO05D004916 7.8e-124 449.1 956 43.4
SHI04403 Sapria himalayana HOM05D003986 ORTHO05D004916 2.2e-118 431.0 308 69.8
CBR_g39719 Chara braunii HOM05D003986 ORTHO05D004916 8.1e-113 412.5 317 60.9
MCO13G375 Micromonas commoda HOM05D003986 ORTHO05D004916 2.9e-70 271.2 316 43.4
COL.COLO4_04150 Corchorus olitorius HOM05D003986 ORTHO05D004916 1.3e-62 245.7 181 70.2
TAR371G1117 Trochodendron aralioides HOM05D003986 ORTHO05D004916 2.8e-44 184.9 562 32.4
PRCOL_00006124 Prasinoderma coloniale HOM05D003986 ORTHO05D004916 5.2e-43 180.6 317 36.0
CAN.G71.1 Capsicum annuum HOM05D003986 ORTHO05D004916 1.5e-37 162.5 412 38.6
RcHm_v2.0_Chr2g0110801 Rosa chinensis HOM05D003986 ORTHO05D004916 1.4e-35 156.0 89 80.9
Actinidia23394 Actinidia chinensis HOM05D003986 ORTHO05D004916 6.8e-35 153.7 341 38.1
Cfa024658 Carpinus fangiana HOM05D003986 ORTHO05D004916 1.2e-28 132.9 648 25.0
TAR629G2897 Trochodendron aralioides HOM05D003986 ORTHO05D004916 1.1e-24 119.8 122 55.7
COL.COLO4_22391 Corchorus olitorius HOM05D002579 ORTHO05D002775 2.4e-11 75.5 36 88.9
Psat0s3352g0200 Pisum sativum HOM05D003986 ORTHO05D020973 7.6e-10 70.5 53 75.5
VMungo0266G0001 Vigna mungo HOM05D000230 ORTHO05D000176 4.2e-08 64.7 75 49.3
VMungo0465G0002 Vigna mungo HOM05D003986 ORTHO05D004916 1.2e-07 63.2 60 58.3
COL.COLO4_22474 Corchorus olitorius HOM05D002548 ORTHO05D003031 1.6e-07 62.8 111 34.2
Cre12.g507700 Chlamydomonas reinhardtii HOM05D003986 ORTHO05D004916 6.6e-06 57.4 107 34.6
Psat0s3352g0120 Pisum sativum HOM05D003435 ORTHO05D020973 6.6e-06 57.4 25 96.0


User provided reference genes

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