Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1313 Ceratophyllum demersum HOM05D004082 ORTHO05D004729 0.0e+00 1449.5 679 100.0
Nn1g02247 Nelumbo nucifera HOM05D004082 ORTHO05D004729 0.0e+00 1128.6 682 77.1
TAR636G3250 Trochodendron aralioides HOM05D004082 ORTHO05D004729 0.0e+00 1127.5 682 75.5
Ciclev10000150m.g Citrus clementina HOM05D004082 ORTHO05D004729 0.0e+00 1098.6 686 74.9
GSVIVG01000073001 Vitis vinifera HOM05D004082 ORTHO05D004729 0.0e+00 1097.8 670 76.3
Potri.013G021200 Populus trichocarpa HOM05D004082 ORTHO05D004729 0.0e+00 1078.2 686 73.0
Duzib106G1815 Durio zibethinus HOM05D004082 ORTHO05D004729 0.0e+00 1077.0 687 72.9
vmacro22529 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 0.0e+00 1075.8 683 73.4
Haze_04194 Corylus avellana HOM05D004082 ORTHO05D004729 0.0e+00 1075.5 684 73.7
DCAR_022172 Daucus carota HOM05D004082 ORTHO05D004729 4.6e-312 1074.3 683 73.8
vmacro05017 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 4.6e-312 1074.3 683 73.4
Aqoxy5G00500 Aquilegia oxysepala HOM05D004082 ORTHO05D004729 4.6e-312 1073.5 681 74.4
TPR.G6044 Trifolium pratense HOM05D004082 ORTHO05D004729 4.6e-312 1073.5 683 74.2
CiPaw.07G018100 Carya illinoinensis HOM05D004082 ORTHO05D004729 9.3e-312 1073.2 683 73.6
Thecc.05G302900 Theobroma cacao HOM05D004082 ORTHO05D004729 9.3e-312 1073.2 687 73.1
CSS0005144 Camellia sinensis var. sinensis HOM05D004082 ORTHO05D004729 4.2e-311 1070.8 686 72.4
DCAR_003333 Daucus carota HOM05D004082 ORTHO05D004729 4.2e-311 1070.8 681 72.5
Lj5g0001168 Lotus japonicus HOM05D004082 ORTHO05D004729 1.6e-310 1068.9 680 74.1
Manes.08G120500 Manihot esculenta HOM05D004082 ORTHO05D004729 2.7e-310 1068.1 683 72.6
Dinv40289 Davidia involucrata HOM05D004082 ORTHO05D004729 7.8e-310 1066.6 677 74.3
Sabra13G0023600 Salix brachista HOM05D004082 ORTHO05D004729 1.3e-309 1065.8 686 72.3
MD12G1218800 Malus domestica HOM05D004082 ORTHO05D004729 3.9e-309 1064.3 686 73.2
Gorai.013G124100 Gossypium raimondii HOM05D004082 ORTHO05D004729 5.1e-309 1063.9 688 72.5
Prupe.6G325300 Prunus persica HOM05D004082 ORTHO05D004729 5.1e-309 1063.9 685 73.3
TWI56G0720 Tripterygium wilfordii HOM05D004082 ORTHO05D004729 8.7e-309 1063.1 687 72.6
VMungo0720G1572 Vigna mungo HOM05D004082 ORTHO05D004729 1.5e-308 1062.4 678 74.0
Duzib177G1172 Durio zibethinus HOM05D004082 ORTHO05D004729 1.9e-308 1062.0 684 73.0
FAN05G3196 Fragaria x ananassa HOM05D004082 ORTHO05D004729 1.9e-308 1062.0 686 72.7
QL03p007071 Quercus lobata HOM05D004082 ORTHO05D004729 1.9e-308 1062.0 683 72.6
Gohir.A13G107600 Gossypium hirsutum HOM05D004082 ORTHO05D004729 2.5e-308 1061.6 688 72.4
FAN09G0543 Fragaria x ananassa HOM05D004082 ORTHO05D004729 3.3e-308 1061.2 683 73.1
Ca_10110_v3 Cicer arietinum L. HOM05D004082 ORTHO05D004729 5.6e-308 1060.4 685 72.6
Lj5C530G2 Lonicera japonica HOM05D004082 ORTHO05D004729 5.6e-308 1060.4 680 73.2
RcHm_v2.0_Chr3g0454891 Rosa chinensis HOM05D004082 ORTHO05D004729 7.3e-308 1060.1 685 72.4
Eucgr.H04490 Eucalyptus grandis HOM05D004082 ORTHO05D004729 9.6e-308 1059.7 694 71.2
Cpa.g.sc48.57 Carica papaya HOM05D004082 ORTHO05D004729 1.2e-307 1059.3 686 72.3
Gohir.D13G110800 Gossypium hirsutum HOM05D004082 ORTHO05D004729 1.2e-307 1059.3 688 72.2
Lj5C472G3 Lonicera japonica HOM05D004082 ORTHO05D004729 2.1e-307 1058.5 680 73.1
Peaxi162Scf00037g00423 Petunia axillaris HOM05D004082 ORTHO05D004729 2.1e-307 1058.5 680 71.8
Glyma.20G233900 Glycine max HOM05D004082 ORTHO05D004729 3.6e-307 1057.7 686 73.5
Phvul.007G180100 Phaseolus vulgaris HOM05D004082 ORTHO05D004729 3.6e-307 1057.7 679 73.6
Sed0016495 Sechium edule HOM05D004082 ORTHO05D004729 3.6e-307 1057.7 687 72.1
Psat6g151160 Pisum sativum HOM05D004082 ORTHO05D004729 6.2e-307 1057.0 680 72.9
Sopen01g042650 Solanum pennellii HOM05D004082 ORTHO05D004729 8.1e-307 1056.6 681 71.5
FAN05G5148 Fragaria x ananassa HOM05D004082 ORTHO05D004729 1.4e-306 1055.8 686 72.6
Medtr7g113570 Medicago truncatula HOM05D004082 ORTHO05D004729 1.4e-306 1055.8 674 73.6
FvH4_6g05900 Fragaria vesca HOM05D004082 ORTHO05D004729 1.8e-306 1055.4 683 72.8
Medtr1g082890 Medicago truncatula HOM05D004082 ORTHO05D004729 2.4e-306 1055.0 675 73.6
Gohir.D11G275400 Gossypium hirsutum HOM05D004082 ORTHO05D004729 9.0e-306 1053.1 680 72.1
PGR031G3794 Punica granatum HOM05D004082 ORTHO05D004729 9.0e-306 1053.1 688 72.7
Cc02_g33390 Coffea canephora HOM05D004082 ORTHO05D004729 7.6e-305 1050.0 687 71.5
Gorai.007G297200 Gossypium raimondii HOM05D004082 ORTHO05D004729 7.6e-305 1050.0 680 71.8
Os05g0391500 Oryza sativa ssp. japonica HOM05D004082 ORTHO05D004729 1.7e-304 1048.9 678 72.1
Sc16g0008480 Simmondsia chinensis HOM05D004082 ORTHO05D004729 1.7e-304 1048.9 688 70.6
arahy.Tifrunner.gnm1.ann1.DUKX6J Arachis hypogaea HOM05D004082 ORTHO05D004729 2.2e-304 1048.5 681 71.5
Solyc01g099090.3 Solanum lycopersicum HOM05D004082 ORTHO05D004729 2.2e-304 1048.5 681 70.9
CANSAT54G2367 Cannabis sativa HOM05D004082 ORTHO05D004729 4.9e-304 1047.3 694 71.6
HPP92_001021 Vanilla planifolia HOM05D004082 ORTHO05D004729 6.4e-304 1047.0 674 74.0
Glyma.10G154400 Glycine max HOM05D004082 ORTHO05D004729 8.4e-304 1046.6 685 72.6
Gohir.A11G265200 Gossypium hirsutum HOM05D004082 ORTHO05D004729 1.1e-303 1046.2 680 71.5
TPR.G33180 Trifolium pratense HOM05D004082 ORTHO05D004729 1.1e-303 1046.2 678 72.6
PGSC0003DMG401024737 Solanum tuberosum HOM05D004082 ORTHO05D004729 1.4e-303 1045.8 680 71.2
CsaV3_1G038970 Cucumis sativus L. HOM05D004082 ORTHO05D004729 5.4e-303 1043.9 683 71.9
Migut.O00505 Erythranthe guttata HOM05D004082 ORTHO05D004729 5.4e-303 1043.9 676 71.4
Lj1g0013013 Lotus japonicus HOM05D004082 ORTHO05D004729 7.1e-303 1043.5 683 71.6
Oeu038297.1 Olea europaea HOM05D004082 ORTHO05D004729 9.3e-303 1043.1 685 72.3
HanXRQChr02g0046191 Helianthus annuus HOM05D004082 ORTHO05D004729 1.6e-302 1042.3 680 71.3
ECA236G4884 Erigeron canadensis HOM05D004082 ORTHO05D004729 2.7e-302 1041.6 675 72.3
PSO832G1048 Papaver somniferum HOM05D004082 ORTHO05D004729 2.7e-302 1041.6 674 72.0
Migut.N02007 Erythranthe guttata HOM05D004082 ORTHO05D004729 4.6e-302 1040.8 679 71.3
Phvul.006G092100 Phaseolus vulgaris HOM05D004082 ORTHO05D004729 4.6e-302 1040.8 689 71.3
MELO3C015324.2 Cucumis melo HOM05D004082 ORTHO05D004729 7.8e-302 1040.0 683 71.2
arahy.Tifrunner.gnm1.ann1.7P2G6T Arachis hypogaea HOM05D004082 ORTHO05D004729 1.0e-301 1039.6 681 70.9
SGA_v2.0_scaffold81G26069 Striga asiatica HOM05D004082 ORTHO05D004729 1.7e-301 1038.9 677 70.8
Lalb_Chr18g0045631 Lupinus albus HOM05D004082 ORTHO05D004729 2.3e-301 1038.5 673 72.4
Ca_09358_v3 Cicer arietinum L. HOM05D004082 ORTHO05D004729 5.1e-301 1037.3 673 71.8
Prupe.6G325400 Prunus persica HOM05D004082 ORTHO05D004729 1.1e-300 1036.2 684 70.6
CAN.G1034.45 Capsicum annuum HOM05D004082 ORTHO05D004729 1.9e-300 1035.4 680 70.3
Psat3g011080 Pisum sativum HOM05D004082 ORTHO05D004729 2.5e-300 1035.0 680 72.8
RhsimUnG0226200 Rhododendron simsii HOM05D004082 ORTHO05D004729 2.5e-300 1035.0 694 69.9
MSTRG.27997 Avicennia marina HOM05D004082 ORTHO05D004729 3.3e-300 1034.6 685 69.9
FAN14G3006 Fragaria x ananassa HOM05D004082 ORTHO05D004729 9.6e-300 1033.1 671 72.7
Zm00001eb287240 Zea mays HOM05D004082 ORTHO05D004729 9.6e-300 1033.1 682 71.0
Lalb_Chr02g0148261 Lupinus albus HOM05D004082 ORTHO05D004729 2.8e-299 1031.6 678 70.8
Ah.06g189390 Amaranthus hybridus HOM05D004082 ORTHO05D004729 3.6e-299 1031.2 685 71.4
SalBow3G1583 Salvia bowleyana HOM05D004082 ORTHO05D004729 1.8e-298 1028.9 677 70.5
arahy.Tifrunner.gnm1.ann1.MMBS5J Arachis hypogaea HOM05D004082 ORTHO05D004729 2.4e-298 1028.5 679 70.7
arahy.Tifrunner.gnm1.ann1.0R76NZ Arachis hypogaea HOM05D004082 ORTHO05D004729 3.1e-298 1028.1 679 70.8
VMungo0540G1737 Vigna mungo HOM05D004082 ORTHO05D004729 1.2e-297 1026.2 687 70.7
Hund07072 Selenicereus undatus HOM05D004082 ORTHO05D004729 2.0e-297 1025.4 688 70.3
Glyma.19G235500 Glycine max HOM05D004082 ORTHO05D004729 2.6e-297 1025.0 681 71.4
Glyma.03G238100 Glycine max HOM05D004082 ORTHO05D004729 7.6e-297 1023.5 681 70.9
MD12G1218900 Malus domestica HOM05D004082 ORTHO05D004729 8.4e-296 1020.0 685 69.9
AUR62000827 Chenopodium quinoa HOM05D004082 ORTHO05D004729 4.2e-295 1017.7 686 69.7
Aqoxy2G03354 Aquilegia oxysepala HOM05D004082 ORTHO05D004729 7.1e-295 1016.9 683 69.4
ClCG03G016970 Citrullus lanatus HOM05D004082 ORTHO05D004729 2.7e-294 1015.0 682 69.4
THA.LOC104805875 Tarenaya hassleriana HOM05D004082 ORTHO05D004729 1.8e-293 1012.3 680 70.1
AL1G19440 Arabidopsis lyrata HOM05D004082 ORTHO05D004729 2.3e-293 1011.9 672 70.5
EL10Ac4g09354 Beta vulgaris HOM05D004082 ORTHO05D004729 2.3e-293 1011.9 680 71.0
Hund21813 Selenicereus undatus HOM05D004082 ORTHO05D004729 4.3e-292 1007.7 691 69.3
CARHR008900 Cardamine hirsuta HOM05D004082 ORTHO05D004729 2.1e-291 1005.4 679 69.5
TWI56G1006 Tripterygium wilfordii HOM05D004082 ORTHO05D004729 4.0e-290 1001.1 686 69.1
AT1G09010 Arabidopsis thaliana HOM05D004082 ORTHO05D004729 6.9e-290 1000.3 672 69.9
Aa31sc136G30 Aethionema arabicum HOM05D004082 ORTHO05D004729 2.6e-289 998.4 676 69.7
C05p07040 Brassica napus HOM05D004082 ORTHO05D004729 4.5e-289 997.7 675 70.4
BolC5t29459H Brassica oleracea HOM05D004082 ORTHO05D004729 4.5e-289 997.7 675 70.4
BraA06t23793Z Brassica rapa HOM05D004082 ORTHO05D004729 8.4e-288 993.4 675 69.6
Carub.0001s0833 Capsella rubella HOM05D004082 ORTHO05D004729 8.4e-288 993.4 675 69.2
Migut.B01033 Erythranthe guttata HOM05D004082 ORTHO05D004729 1.4e-287 992.6 676 68.8
Lsat_1_v5_gn_9_86081 Lactuca sativa HOM05D004082 ORTHO05D004729 2.4e-287 991.9 692 68.1
Sp1g07620 Schrenkiella parvula HOM05D004082 ORTHO05D004729 5.5e-287 990.7 678 68.7
A06p05830 Brassica napus HOM05D004082 ORTHO05D004729 1.6e-286 989.2 678 68.7
A08p34860 Brassica napus HOM05D004082 ORTHO05D004729 1.6e-286 989.2 675 69.0
C08p12400 Brassica napus HOM05D004082 ORTHO05D004729 2.3e-285 985.3 675 68.9
BolC8t48880H Brassica oleracea HOM05D004082 ORTHO05D004729 2.3e-285 985.3 675 68.9
BraA08t35397Z Brassica rapa HOM05D004082 ORTHO05D004729 2.3e-285 985.3 675 68.6
Nitab4.5_0000137g0200 Nicotiana tabacum HOM05D004082 ORTHO05D004729 1.4e-282 976.1 673 68.5
COL.COLO4_13463 Corchorus olitorius HOM05D004082 ORTHO05D004729 3.1e-282 974.9 704 66.6
AUR62005147 Chenopodium quinoa HOM05D004082 ORTHO05D004729 5.3e-282 974.2 685 67.2
BcaB07g34118 Brassica carinata HOM05D004082 ORTHO05D004729 2.0e-281 972.2 680 68.2
Thhalv10006730m.g Eutrema salsugineum HOM05D004082 ORTHO05D004729 2.5e-276 955.3 675 68.0
Lj9A80G16 Lonicera japonica HOM05D004082 ORTHO05D004729 1.3e-275 953.0 695 65.5
unitig_52.g17387 Utricularia gibba HOM05D004082 ORTHO05D004729 4.5e-273 944.5 677 66.6
BcaC07g38465 Brassica carinata HOM05D004082 ORTHO05D004729 3.3e-268 928.3 675 67.3
BcaC07g38468 Brassica carinata HOM05D004082 ORTHO05D004729 1.1e-260 903.3 671 64.8
SHI18140 Sapria himalayana HOM05D004082 ORTHO05D004729 3.6e-254 881.7 717 59.1
BcaC05g24752 Brassica carinata HOM05D004082 ORTHO05D004729 5.9e-249 864.4 673 64.2
arahy.Tifrunner.gnm1.ann1.HF1TD9 Arachis hypogaea HOM05D004082 ORTHO05D004729 2.2e-243 845.9 483 78.1
Nitab4.5_0003227g0010 Nicotiana tabacum HOM05D004082 ORTHO05D004729 5.5e-239 831.2 557 70.2
Mapoly0034s0073 Marchantia polymorpha HOM05D004082 ORTHO05D004729 4.7e-214 748.4 671 54.7
ATR0626G266 Amborella trichopoda HOM05D004082 ORTHO05D004729 2.3e-213 746.1 499 69.7
SMO367G0677 Selaginella moellendorffii HOM05D004082 ORTHO05D004729 1.1e-210 737.3 668 54.8
Pp3c8_17060 Physcomitrium patens HOM05D004082 ORTHO05D004729 1.7e-195 686.8 666 52.6
Pp3c15_10050 Physcomitrium patens HOM05D004082 ORTHO05D004729 7.6e-188 661.4 672 50.7
AagrBONN_evm.TU.Sc2ySwM_368.1060 Anthoceros agrestis HOM05D004082 ORTHO05D004729 9.9e-180 634.4 670 48.4
CBR_g23107 Chara braunii HOM05D004082 ORTHO05D004729 2.2e-163 580.1 529 52.9
Atru.chr1.88 Acer truncatum HOM05D004082 ORTHO05D004729 2.6e-103 380.6 407 50.1
CAN.G623.33 Capsicum annuum HOM05D004082 ORTHO05D004729 2.4e-101 374.0 368 54.6
QL03p006592 Quercus lobata HOM05D004082 ORTHO05D004729 2.1e-76 291.2 239 61.1
QL03p006635 Quercus lobata HOM05D004082 ORTHO05D004729 1.0e-75 288.9 239 60.3
Nitab4.5_0003227g0030 Nicotiana tabacum HOM05D004082 ORTHO05D004729 5.3e-64 250.0 127 84.3
SEGI_31510 Sequoiadendron giganteum HOM05D004082 ORTHO05D004729 1.8e-59 235.0 125 81.6
QL03p006553 Quercus lobata HOM05D004082 ORTHO05D004729 4.3e-50 203.8 375 36.8
PRCOL_00002375 Prasinoderma coloniale HOM05D004082 ORTHO05D004729 1.3e-49 202.2 462 31.8
SGA_v2.0_scaffold54G19617 Striga asiatica HOM05D004082 ORTHO05D004729 7.9e-36 156.4 148 53.4
CAN.G22.21 Capsicum annuum HOM05D004082 ORTHO05D004729 8.8e-35 152.9 149 52.3
Cfa025543 Carpinus fangiana HOM05D004082 ORTHO05D004729 6.5e-30 136.7 681 22.0
Atru.chr2.403 Acer truncatum HOM05D004082 ORTHO05D004729 2.3e-27 128.3 144 47.9
Hund21239 Selenicereus undatus HOM05D004082 ORTHO05D004729 7.4e-26 123.2 162 43.8
CAN.G623.34 Capsicum annuum HOM05D004082 ORTHO05D004729 5.3e-24 117.1 86 61.6
CBR_g49561 Chara braunii HOM05D000019 ORTHO05D000353 7.0e-24 116.7 183 37.7
ATR0626G076 Amborella trichopoda HOM05D004082 ORTHO05D004729 2.9e-22 111.3 109 51.4
SGA_v2.0_scaffold54G19618 Striga asiatica HOM05D004082 ORTHO05D004729 1.4e-19 102.4 121 47.1
QL03p073950 Quercus lobata HOM05D004082 ORTHO05D004729 2.8e-09 68.2 118 36.4
Atru.chr2.402 Acer truncatum HOM05D004082 ORTHO05D004729 7.0e-08 63.5 40 67.5
CSS0034197 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 1.0e-06 59.7 25 96.0


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