Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1210 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 6.4e-76 287.3 147 100.0
CDE05G3472 Ceratophyllum demersum HOM05D004632 ORTHO05D005556 7.1e-67 257.3 141 92.2
MBI15_g05236_MAGBIO Magnolia biondii HOM05D004632 ORTHO05D005556 5.9e-53 211.1 140 76.4
Sed0004025 Sechium edule HOM05D004632 ORTHO05D005556 3.8e-52 208.4 143 72.7
MELO3C016968.2 Cucumis melo HOM05D004632 ORTHO05D005556 5.0e-52 208.0 143 72.7
Thecc.09G016800 Theobroma cacao HOM05D004632 ORTHO05D005556 6.5e-52 207.6 143 72.7
CsaV3_4G036640 Cucumis sativus L. HOM05D004632 ORTHO05D005556 8.5e-52 207.2 143 72.0
Dinv34967 Davidia involucrata HOM05D004632 ORTHO05D005556 1.1e-51 206.8 144 74.3
Duzib168G2284 Durio zibethinus HOM05D004632 ORTHO05D005556 1.1e-51 206.8 143 73.4
ClCG05G016370 Citrullus lanatus HOM05D004632 ORTHO05D005556 1.4e-51 206.5 145 71.7
TWI32G0830 Tripterygium wilfordii HOM05D004632 ORTHO05D005556 4.2e-51 204.9 146 69.9
DCAR_015265 Daucus carota HOM05D004632 ORTHO05D005556 5.5e-51 204.5 142 72.5
Gohir.A05G058900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 7.2e-51 204.1 143 72.7
Lsat_1_v5_gn_6_77900 Lactuca sativa HOM05D004632 ORTHO05D005556 7.2e-51 204.1 147 72.1
RcHm_v2.0_Chr6g0299541 Rosa chinensis HOM05D004632 ORTHO05D005556 7.2e-51 204.1 143 70.6
GSVIVG01035887001 Vitis vinifera HOM05D004632 ORTHO05D005556 7.2e-51 204.1 143 72.0
Ciclev10007613m.g Citrus clementina HOM05D004632 ORTHO05D005556 9.4e-51 203.8 141 71.6
FAN20G0152 Fragaria x ananassa HOM05D004632 ORTHO05D005556 9.4e-51 203.8 143 69.9
FAN20G1191 Fragaria x ananassa HOM05D004632 ORTHO05D005556 9.4e-51 203.8 143 69.9
FvH4_2g41020 Fragaria vesca HOM05D004632 ORTHO05D005556 1.2e-50 203.4 143 69.9
Lsat_1_v5_gn_7_4261 Lactuca sativa HOM05D004632 ORTHO05D005556 2.1e-50 202.6 143 71.3
Prupe.1G392800 Prunus persica HOM05D004632 ORTHO05D005556 2.1e-50 202.6 143 70.6
FAN27G1200 Fragaria x ananassa HOM05D004632 ORTHO05D005556 2.7e-50 202.2 143 69.9
Actinidia22297 Actinidia chinensis HOM05D004632 ORTHO05D005556 3.6e-50 201.8 142 71.8
MD00G1143300 Malus domestica HOM05D004632 ORTHO05D005556 3.6e-50 201.8 142 69.7
vmacro11252 Vaccinium macrocarpon HOM05D004632 ORTHO05D005556 3.6e-50 201.8 142 71.8
Atru.chr7.2537 Acer truncatum HOM05D004632 ORTHO05D005556 4.7e-50 201.4 143 70.6
Lj7A732T26 Lonicera japonica HOM05D004632 ORTHO05D005556 4.7e-50 201.4 143 71.3
MD15G1039100 Malus domestica HOM05D004632 ORTHO05D005556 4.7e-50 201.4 139 70.5
SGA_v2.0_scaffold40G15680 Striga asiatica HOM05D004632 ORTHO05D005556 6.1e-50 201.1 142 71.1
TAR626G1191 Trochodendron aralioides HOM05D004632 ORTHO05D005556 1.0e-49 200.3 143 73.4
Ah.05g177560 Amaranthus hybridus HOM05D004632 ORTHO05D005556 1.4e-49 199.9 143 69.2
SalBow1G2567 Salvia bowleyana HOM05D004632 ORTHO05D005556 1.4e-49 199.9 143 68.5
HanXRQChr03g0084861 Helianthus annuus HOM05D004632 ORTHO05D005556 2.3e-49 199.1 143 69.2
Manes.16G128700 Manihot esculenta HOM05D004632 ORTHO05D005556 3.0e-49 198.7 143 69.9
AUR62023356 Chenopodium quinoa HOM05D004632 ORTHO05D005556 3.9e-49 198.4 143 68.5
Cc09_g08590 Coffea canephora HOM05D004632 ORTHO05D005556 3.9e-49 198.4 142 69.7
Rhsim02G0214000 Rhododendron simsii HOM05D004632 ORTHO05D005556 3.9e-49 198.4 142 70.4
MSTRG.9370 Avicennia marina HOM05D004632 ORTHO05D005556 5.1e-49 198.0 142 69.7
Aqoxy7G03810 Aquilegia oxysepala HOM05D004632 ORTHO05D005556 8.8e-49 197.2 143 69.9
CiPaw.07G229300 Carya illinoinensis HOM05D004632 ORTHO05D005556 8.8e-49 197.2 143 69.2
Migut.N00603 Erythranthe guttata HOM05D004632 ORTHO05D005556 8.8e-49 197.2 142 67.6
EL10Ac1g00704 Beta vulgaris HOM05D004632 ORTHO05D005556 1.1e-48 196.8 143 67.8
Potri.006G263400 Populus trichocarpa HOM05D004632 ORTHO05D005556 2.6e-48 195.7 143 67.8
Potri.018G020200 Populus trichocarpa HOM05D004632 ORTHO05D005556 2.6e-48 195.7 143 67.8
Cpa.g.sc127.22 Carica papaya HOM05D004632 ORTHO05D005556 5.7e-48 194.5 146 67.8
Glyma.06G062300 Glycine max HOM05D004632 ORTHO05D005556 5.7e-48 194.5 143 68.5
arahy.Tifrunner.gnm1.ann1.21LKMJ Arachis hypogaea HOM05D004632 ORTHO05D005556 7.4e-48 194.1 142 69.0
arahy.Tifrunner.gnm1.ann1.8PBG0P Arachis hypogaea HOM05D004632 ORTHO05D005556 7.4e-48 194.1 142 69.0
Sabra06G0205900 Salix brachista HOM05D004632 ORTHO05D005556 7.4e-48 194.1 143 67.1
CSS0008139 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 9.7e-48 193.7 143 71.3
Glyma.04G061600 Glycine max HOM05D004632 ORTHO05D005556 1.3e-47 193.4 143 69.2
ECA240G3507 Erigeron canadensis HOM05D004632 ORTHO05D005556 1.7e-47 193.0 147 68.0
Lalb_Chr23g0268241 Lupinus albus HOM05D004632 ORTHO05D005556 1.7e-47 193.0 143 67.8
VMungo1309G0882 Vigna mungo HOM05D004632 ORTHO05D005556 2.2e-47 192.6 144 68.1
Phvul.009G087600 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 1.1e-46 190.3 143 66.4
BcaB04g19812 Brassica carinata HOM05D004632 ORTHO05D005556 1.8e-46 189.5 146 67.1
A09p06280 Brassica napus HOM05D004632 ORTHO05D005556 1.8e-46 189.5 145 68.3
BolC9t53613H Brassica oleracea HOM05D004632 ORTHO05D005556 1.8e-46 189.5 145 67.6
BraA09t36273Z Brassica rapa HOM05D004632 ORTHO05D005556 1.8e-46 189.5 145 68.3
BcaC04g23574 Brassica carinata HOM05D004632 ORTHO05D005556 2.4e-46 189.1 145 67.6
C09p06950 Brassica napus HOM05D004632 ORTHO05D005556 2.4e-46 189.1 145 67.6
THA.LOC104814991 Tarenaya hassleriana HOM05D004632 ORTHO05D005556 2.4e-46 189.1 142 69.0
ATR0739G094 Amborella trichopoda HOM05D004632 ORTHO05D005556 3.1e-46 188.7 139 66.9
Zm00001eb388650 Zea mays HOM05D004632 ORTHO05D005556 3.1e-46 188.7 141 65.2
Lj1g0022186 Lotus japonicus HOM05D004632 ORTHO05D005556 4.1e-46 188.3 143 64.3
Medtr3g106080 Medicago truncatula HOM05D004632 ORTHO05D005556 4.1e-46 188.3 143 65.7
PSO063G4867 Papaver somniferum HOM05D004632 ORTHO05D005556 4.1e-46 188.3 147 67.3
CSS0046974 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 5.3e-46 188.0 143 69.9
Nn8g39852 Nelumbo nucifera HOM05D004632 ORTHO05D005556 5.3e-46 188.0 143 65.0
Peaxi162Scf00430g00519 Petunia axillaris HOM05D004632 ORTHO05D005556 5.3e-46 188.0 143 69.2
Nitab4.5_0007182g0050 Nicotiana tabacum HOM05D004632 ORTHO05D005556 7.0e-46 187.6 143 67.8
Psat5g032640 Pisum sativum HOM05D004632 ORTHO05D005556 7.0e-46 187.6 143 64.3
Ca_15774_v3 Cicer arietinum L. HOM05D004632 ORTHO05D005556 9.1e-46 187.2 143 65.7
PSO782G2171 Papaver somniferum HOM05D004632 ORTHO05D005556 9.1e-46 187.2 143 66.4
Gorai.001G037500 Gossypium raimondii HOM05D004632 ORTHO05D005556 1.2e-45 186.8 117 78.6
TPR.G1835 Trifolium pratense HOM05D004632 ORTHO05D005556 1.5e-45 186.4 143 65.0
AUR62013801 Chenopodium quinoa HOM05D004632 ORTHO05D005556 2.0e-45 186.0 143 66.4
Gohir.A07G031900 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.0e-45 186.0 117 78.6
Gohir.D07G035600 Gossypium hirsutum HOM05D004632 ORTHO05D005556 2.0e-45 186.0 117 78.6
Carub.0006s2297 Capsella rubella HOM05D004632 ORTHO05D005556 1.0e-44 183.7 119 77.3
CAN.G199.61 Capsicum annuum HOM05D004632 ORTHO05D005556 1.0e-44 183.7 142 65.5
Sp2g22380 Schrenkiella parvula HOM05D004632 ORTHO05D005556 2.2e-44 182.6 116 79.3
CARHR188340 Cardamine hirsuta HOM05D004632 ORTHO05D005556 5.0e-44 181.4 116 77.6
Thhalv10003767m.g Eutrema salsugineum HOM05D004632 ORTHO05D005556 5.0e-44 181.4 119 75.6
C02p59830 Brassica napus HOM05D004632 ORTHO05D005556 6.5e-44 181.0 143 65.7
BolC2t12041H Brassica oleracea HOM05D004632 ORTHO05D005556 6.5e-44 181.0 143 65.7
Solyc06g065700.3 Solanum lycopersicum HOM05D004632 ORTHO05D005556 6.5e-44 181.0 142 66.2
Aa31LG11G4400 Aethionema arabicum HOM05D004632 ORTHO05D005556 1.1e-43 180.3 116 75.9
Os06g0649500 Oryza sativa ssp. japonica HOM05D004632 ORTHO05D005556 2.5e-43 179.1 141 64.5
CSS0042581 Camellia sinensis var. sinensis HOM05D004632 ORTHO05D005556 3.2e-43 178.7 124 74.2
Sopen06g024220 Solanum pennellii HOM05D004632 ORTHO05D005556 4.2e-43 178.3 142 65.5
AT5G25150 Arabidopsis thaliana HOM05D004632 ORTHO05D005556 9.4e-43 177.2 119 74.8
Eucgr.C02661 Eucalyptus grandis HOM05D004632 ORTHO05D005556 1.6e-42 176.4 142 65.5
BcaB07g29936 Brassica carinata HOM05D004632 ORTHO05D005556 2.1e-42 176.0 143 63.6
BraA02t08956Z Brassica rapa HOM05D004632 ORTHO05D005556 2.7e-42 175.6 116 73.3
PGR042G1415 Punica granatum HOM05D004632 ORTHO05D005556 3.6e-42 175.3 147 61.2
A02p39940 Brassica napus HOM05D004632 ORTHO05D005556 6.1e-42 174.5 116 72.4
HPP92_014401 Vanilla planifolia HOM05D004632 ORTHO05D005556 1.4e-41 173.3 142 63.4
AL6G36810 Arabidopsis lyrata HOM05D004632 ORTHO05D005556 1.8e-41 172.9 116 74.1
BcaC03g17924 Brassica carinata HOM05D004632 ORTHO05D005556 3.9e-41 171.8 116 71.6
Nitab4.5_0003976g0020 Nicotiana tabacum HOM05D004632 ORTHO05D005556 1.5e-40 169.9 178 54.5
Phvul.001G042300 Phaseolus vulgaris HOM05D004632 ORTHO05D005556 2.6e-40 169.1 143 58.7
VMungo0647G2075 Vigna mungo HOM05D004632 ORTHO05D005556 4.4e-40 168.3 143 58.7
Sed0017212 Sechium edule HOM05D004632 ORTHO05D005556 4.8e-39 164.9 119 68.1
TAR625G0176 Trochodendron aralioides HOM05D004632 ORTHO05D005556 2.4e-38 162.5 143 65.0
MSTRG.4644 Avicennia marina HOM05D004632 ORTHO05D005556 4.1e-38 161.8 141 57.4
Glyma.17G222200 Glycine max HOM05D004632 ORTHO05D005556 7.0e-38 161.0 143 56.6
Hund27424 Selenicereus undatus HOM05D004632 ORTHO05D005556 1.5e-35 153.3 256 39.5
Haze_21427 Corylus avellana HOM05D004632 ORTHO05D005556 5.5e-35 151.4 116 67.2
Pp3c12_23330 Physcomitrium patens HOM05D004632 ORTHO05D005556 7.2e-35 151.0 140 56.4
Mapoly0009s0169 Marchantia polymorpha HOM05D004632 ORTHO05D005556 3.6e-34 148.7 125 58.4
PSO541G0014 Papaver somniferum HOM05D004632 ORTHO05D005556 1.2e-32 143.7 113 65.5
Actinidia13189 Actinidia chinensis HOM05D004632 ORTHO05D005556 4.4e-32 141.7 128 57.8
COL.COLO4_18941 Corchorus olitorius HOM05D004632 ORTHO05D005556 9.7e-32 140.6 112 65.2
SMO118G0104 Selaginella moellendorffii HOM05D004632 ORTHO05D005556 4.8e-31 138.3 141 53.2
Gohir.D05G060932 Gossypium hirsutum HOM05D004632 ORTHO05D005556 7.7e-29 131.0 133 56.4
Manes.03G009801 Manihot esculenta HOM05D004632 ORTHO05D005556 4.8e-23 111.7 156 46.2
Actinidia09762 Actinidia chinensis HOM05D004632 ORTHO05D005556 2.9e-20 102.4 66 72.7
Oeu013659.1 Olea europaea HOM05D004632 ORTHO05D005556 5.0e-20 101.7 88 59.1
Dinv40981 Davidia involucrata HOM05D004632 ORTHO05D005556 2.8e-18 95.9 78 62.8
SEGI_30848 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 3.6e-18 95.5 73 63.0
CBR_g41144 Chara braunii HOM05D004632 ORTHO05D005556 4.4e-16 88.6 67 56.7
MCO11G306 Micromonas commoda HOM05D004632 ORTHO05D005556 9.2e-14 80.9 123 35.0
MCO11G293 Micromonas commoda HOM05D004632 ORTHO05D005556 1.7e-12 76.6 144 33.3
PRCOL_00000651 Prasinoderma coloniale HOM05D004632 ORTHO05D005556 1.1e-11 73.9 112 33.0
Oeu061252.3 Olea europaea HOM05D004632 ORTHO05D005556 2.1e-10 69.7 38 84.2
SEGI_13945 Sequoiadendron giganteum HOM05D004632 ORTHO05D005556 9.8e-08 60.8 41 65.9
Dinv40325 Davidia involucrata HOM05D004632 ORTHO05D005556 9.2e-06 54.3 37 64.9


User provided reference genes

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