Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1140 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 7.0e-212 740.3 372 100.0
CDE11G0603 Ceratophyllum demersum HOM05D003159 ORTHO05D003780 8.2e-144 514.2 265 95.5
Nn3g19572 Nelumbo nucifera HOM05D003159 ORTHO05D003780 5.0e-133 478.4 365 67.4
Aqoxy6G02795 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 8.0e-131 471.1 319 71.8
Potri.019G012300 Populus trichocarpa HOM05D003159 ORTHO05D003780 6.7e-130 468.0 301 74.8
TAR362G0530 Trochodendron aralioides HOM05D003159 ORTHO05D003780 6.7e-130 468.0 372 64.8
Thecc.05G277700 Theobroma cacao HOM05D003159 ORTHO05D003780 8.8e-130 467.6 299 76.6
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 1.2e-129 467.2 346 67.9
Sabra19G0017400 Salix brachista HOM05D003159 ORTHO05D003780 2.6e-129 466.1 312 73.1
Sabra19G0024900 Salix brachista HOM05D003159 ORTHO05D003780 2.6e-129 466.1 312 73.1
Ciclev10027983m.g Citrus clementina HOM05D003159 ORTHO05D003780 7.5e-129 464.5 316 71.8
Cpa.g.sc162.3 Carica papaya HOM05D003159 ORTHO05D003780 2.8e-128 462.6 292 76.4
EL10Ac8g19239 Beta vulgaris HOM05D003159 ORTHO05D003780 3.7e-128 462.2 326 69.9
Manes.15G108700 Manihot esculenta HOM05D003159 ORTHO05D003780 3.7e-128 462.2 301 75.1
Hund02191 Selenicereus undatus HOM05D003159 ORTHO05D003780 1.1e-127 460.7 342 67.5
GSVIVG01036258001 Vitis vinifera HOM05D003159 ORTHO05D003780 1.4e-127 460.3 284 79.2
Gohir.A09G017500 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.8e-127 459.9 298 75.8
Potri.013G043500 Populus trichocarpa HOM05D003159 ORTHO05D003780 5.3e-127 458.4 310 72.6
RcHm_v2.0_Chr3g0450361 Rosa chinensis HOM05D003159 ORTHO05D003780 5.3e-127 458.4 284 77.1
Eucgr.J00270 Eucalyptus grandis HOM05D003159 ORTHO05D003780 1.2e-126 457.2 309 72.8
Duzib128G1665 Durio zibethinus HOM05D003159 ORTHO05D003780 1.6e-126 456.8 277 78.3
Sc06g0010270 Simmondsia chinensis HOM05D003159 ORTHO05D003780 2.0e-126 456.4 301 73.4
Gorai.013G036100 Gossypium raimondii HOM05D003159 ORTHO05D003780 2.7e-126 456.1 322 70.5
Aqoxy4G01990 Aquilegia oxysepala HOM05D003159 ORTHO05D003780 3.5e-126 455.7 331 68.3
Phvul.007G188800 Phaseolus vulgaris HOM05D003159 ORTHO05D003780 3.5e-126 455.7 357 65.5
AUR62027480 Chenopodium quinoa HOM05D003159 ORTHO05D003780 4.5e-126 455.3 296 74.0
MELO3C008089.2 Cucumis melo HOM05D003159 ORTHO05D003780 4.5e-126 455.3 310 72.6
CANSAT54G0311 Cannabis sativa HOM05D003159 ORTHO05D003780 7.7e-126 454.5 300 74.0
FvH4_5g12790 Fragaria vesca HOM05D003159 ORTHO05D003780 1.3e-125 453.8 284 77.1
Gohir.D11G260700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 1.3e-125 453.8 304 74.3
MD12G1244300 Malus domestica HOM05D003159 ORTHO05D003780 1.3e-125 453.8 325 70.8
CsaV3_2G033180 Cucumis sativus L. HOM05D003159 ORTHO05D003780 2.2e-125 453.0 300 74.0
Gorai.007G279300 Gossypium raimondii HOM05D003159 ORTHO05D003780 2.2e-125 453.0 322 70.5
A03p20800 Brassica napus HOM05D003159 ORTHO05D003780 3.8e-125 452.2 359 64.3
VMungo0720G2291 Vigna mungo HOM05D003159 ORTHO05D003780 3.8e-125 452.2 356 64.6
Gohir.A11G250300 Gossypium hirsutum HOM05D003159 ORTHO05D003780 5.0e-125 451.8 304 74.3
MD04G1227600 Malus domestica HOM05D003159 ORTHO05D003780 5.0e-125 451.8 326 69.6
Sed0018461 Sechium edule HOM05D003159 ORTHO05D003780 5.0e-125 451.8 300 73.7
AL4G34620 Arabidopsis lyrata HOM05D003159 ORTHO05D003780 6.5e-125 451.4 347 65.1
Gohir.D13G031700 Gossypium hirsutum HOM05D003159 ORTHO05D003780 6.5e-125 451.4 304 74.0
PGR031G1742 Punica granatum HOM05D003159 ORTHO05D003780 8.5e-125 451.1 320 70.6
A04p28880 Brassica napus HOM05D003159 ORTHO05D003780 1.1e-124 450.7 333 67.9
CSS0035771 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.1e-124 450.7 302 72.5
Ca_10033_v3 Cicer arietinum L. HOM05D003159 ORTHO05D003780 1.1e-124 450.7 290 74.5
Glyma.10G163700 Glycine max HOM05D003159 ORTHO05D003780 1.1e-124 450.7 300 73.7
QL01p030114 Quercus lobata HOM05D003159 ORTHO05D003780 1.1e-124 450.7 301 73.1
QL07p003261 Quercus lobata HOM05D003159 ORTHO05D003780 1.1e-124 450.7 301 73.1
BraA03t11320Z Brassica rapa HOM05D003159 ORTHO05D003780 1.5e-124 450.3 326 69.0
arahy.Tifrunner.gnm1.ann1.N0IL4Q Arachis hypogaea HOM05D003159 ORTHO05D003780 1.9e-124 449.9 284 76.8
Glyma.20G226300 Glycine max HOM05D003159 ORTHO05D003780 1.9e-124 449.9 357 64.7
ClCG11G008930 Citrullus lanatus HOM05D003159 ORTHO05D003780 2.5e-124 449.5 300 73.3
BraA04t18362Z Brassica rapa HOM05D003159 ORTHO05D003780 3.2e-124 449.1 333 67.6
Prupe.6G346800 Prunus persica HOM05D003159 ORTHO05D003780 3.2e-124 449.1 284 76.4
ATR0111G007 Amborella trichopoda HOM05D003159 ORTHO05D003780 4.2e-124 448.7 284 73.9
TWI81G0941 Tripterygium wilfordii HOM05D003159 ORTHO05D003780 4.2e-124 448.7 333 69.1
THA.LOC104808027 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 5.5e-124 448.4 321 68.8
Thhalv10016367m.g Eutrema salsugineum HOM05D003159 ORTHO05D003780 7.2e-124 448.0 300 72.3
Psat6g145160 Pisum sativum HOM05D003159 ORTHO05D003780 7.2e-124 448.0 312 70.5
BcaC01g05601 Brassica carinata HOM05D003159 ORTHO05D003780 9.4e-124 447.6 333 67.6
Lalb_Chr06g0168161 Lupinus albus HOM05D003159 ORTHO05D003780 9.4e-124 447.6 309 71.2
TPR.G33936 Trifolium pratense HOM05D003159 ORTHO05D003780 9.4e-124 447.6 307 72.3
BcaB06g29020 Brassica carinata HOM05D003159 ORTHO05D003780 1.2e-123 447.2 333 67.6
BolC3t14843H Brassica oleracea HOM05D003159 ORTHO05D003780 1.2e-123 447.2 333 67.6
CAN.G143.64 Capsicum annuum HOM05D003159 ORTHO05D003780 1.2e-123 447.2 305 70.2
BcaC02g07498 Brassica carinata HOM05D003159 ORTHO05D003780 1.6e-123 446.8 334 67.4
C03p24440 Brassica napus HOM05D003159 ORTHO05D003780 1.6e-123 446.8 333 67.6
C04p66140 Brassica napus HOM05D003159 ORTHO05D003780 1.6e-123 446.8 334 67.4
CARHR131850 Cardamine hirsuta HOM05D003159 ORTHO05D003780 1.6e-123 446.8 309 70.2
Peaxi162Scf00120g00723 Petunia axillaris HOM05D003159 ORTHO05D003780 2.1e-123 446.4 286 73.8
Sopen11g002240 Solanum pennellii HOM05D003159 ORTHO05D003780 2.1e-123 446.4 286 72.7
AT2G37690 Arabidopsis thaliana HOM05D003159 ORTHO05D003780 2.7e-123 446.0 304 71.4
Lj5g0023348 Lotus japonicus HOM05D003159 ORTHO05D003780 2.7e-123 446.0 357 65.5
PSO170G0868 Papaver somniferum HOM05D003159 ORTHO05D003780 2.7e-123 446.0 354 63.3
Solyc11g006340.2 Solanum lycopersicum HOM05D003159 ORTHO05D003780 3.6e-123 445.7 286 72.4
PGSC0003DMG400000995 Solanum tuberosum HOM05D003159 ORTHO05D003780 3.6e-123 445.7 286 72.7
Ah.09g228380 Amaranthus hybridus HOM05D003159 ORTHO05D003780 4.7e-123 445.3 330 67.0
CiPaw.08G119500 Carya illinoinensis HOM05D003159 ORTHO05D003780 4.7e-123 445.3 291 74.6
PSO541G5176 Papaver somniferum HOM05D003159 ORTHO05D003780 8.0e-123 444.5 319 70.2
arahy.Tifrunner.gnm1.ann1.W48W00 Arachis hypogaea HOM05D003159 ORTHO05D003780 1.0e-122 444.1 314 71.3
PSO675G5476 Papaver somniferum HOM05D003159 ORTHO05D003780 1.0e-122 444.1 320 70.0
PSO782G2873 Papaver somniferum HOM05D003159 ORTHO05D003780 1.0e-122 444.1 354 63.3
BolC4t28117H Brassica oleracea HOM05D003159 ORTHO05D003780 1.4e-122 443.7 300 72.0
BcaB01g03763 Brassica carinata HOM05D003159 ORTHO05D003780 2.3e-122 443.0 305 71.1
Hma1.2p1_0345F.1_g131280 Hydrangea macrophylla HOM05D003159 ORTHO05D003780 2.3e-122 443.0 302 72.8
Carub.0004s1964 Capsella rubella HOM05D003159 ORTHO05D003780 3.0e-122 442.6 284 74.6
THA.LOC104799866 Tarenaya hassleriana HOM05D003159 ORTHO05D003780 3.0e-122 442.6 292 71.9
Aa31sc70G90 Aethionema arabicum HOM05D003159 ORTHO05D003780 4.0e-122 442.2 303 71.0
Sp4g20070 Schrenkiella parvula HOM05D003159 ORTHO05D003780 4.0e-122 442.2 337 67.1
TPR.G26626 Trifolium pratense HOM05D003159 ORTHO05D003780 6.8e-122 441.4 290 74.1
PSO170G3230 Papaver somniferum HOM05D003159 ORTHO05D003780 1.2e-121 440.7 321 67.3
Haze_04383 Corylus avellana HOM05D003159 ORTHO05D003780 1.5e-121 440.3 300 71.7
Medtr1g080500 Medicago truncatula HOM05D003159 ORTHO05D003780 2.6e-121 439.5 290 73.1
FAN18G4090 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.4e-121 438.7 300 72.3
Actinidia06676 Actinidia chinensis HOM05D003159 ORTHO05D003780 2.2e-120 436.4 301 71.1
Sabra13G0039800 Salix brachista HOM05D003159 ORTHO05D003780 2.2e-120 436.4 356 62.6
Rhsim01G0186900 Rhododendron simsii HOM05D003159 ORTHO05D003780 2.8e-120 436.0 330 66.4
Cc02_g09140 Coffea canephora HOM05D003159 ORTHO05D003780 4.8e-120 435.3 299 71.6
Os01g0199900 Oryza sativa ssp. japonica HOM05D003159 ORTHO05D003780 1.1e-119 434.1 330 62.7
HPP92_021777 Vanilla planifolia HOM05D003159 ORTHO05D003780 1.4e-119 433.7 293 70.0
DCAR_001864 Daucus carota HOM05D003159 ORTHO05D003780 2.4e-119 433.0 323 65.6
MSTRG.927 Avicennia marina HOM05D003159 ORTHO05D003780 3.1e-119 432.6 301 67.8
Lalb_Chr21g0311061 Lupinus albus HOM05D003159 ORTHO05D003780 4.1e-119 432.2 284 72.2
Migut.F01579 Erythranthe guttata HOM05D003159 ORTHO05D003780 2.0e-118 429.9 315 66.0
ECA248G3699 Erigeron canadensis HOM05D003159 ORTHO05D003780 3.5e-118 429.1 304 69.1
HanXRQChr05g0152861 Helianthus annuus HOM05D003159 ORTHO05D003780 4.5e-118 428.7 332 64.5
HanXRQChr04g0112121 Helianthus annuus HOM05D003159 ORTHO05D003780 5.9e-118 428.3 335 65.4
FAN12G0237 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.0e-117 427.6 326 66.6
vmacro20008 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 1.3e-117 427.2 322 65.8
vmacro19526 Vaccinium macrocarpon HOM05D003159 ORTHO05D003780 4.2e-116 422.2 332 64.2
SalBow8G0718 Salvia bowleyana HOM05D003159 ORTHO05D003780 5.5e-116 421.8 309 66.7
FAN18G4088 Fragaria x ananassa HOM05D003159 ORTHO05D003780 1.6e-115 420.2 342 63.5
FAN08G2202 Fragaria x ananassa HOM05D003159 ORTHO05D003780 6.1e-115 418.3 342 63.2
MBI12_g21500_MAGBIO Magnolia biondii HOM05D003159 ORTHO05D003780 2.6e-113 412.9 334 64.7
unitig_22.g5684 Utricularia gibba HOM05D003159 ORTHO05D003780 2.6e-113 412.9 286 66.8
Rhsim05G0176200 Rhododendron simsii HOM05D003159 ORTHO05D003780 2.2e-112 409.8 395 56.5
Nitab4.5_0001781g0080 Nicotiana tabacum HOM05D003159 ORTHO05D003780 2.0e-110 403.3 323 62.8
Mapoly0046s0034 Marchantia polymorpha HOM05D003159 ORTHO05D003780 2.9e-109 399.4 286 67.1
Zm00001eb120570 Zea mays HOM05D003159 ORTHO05D003780 2.9e-109 399.4 265 68.7
SGA_v2.0_scaffold4G01959 Striga asiatica HOM05D003159 ORTHO05D003780 2.3e-106 389.8 308 63.0
Zm00001eb284760 Zea mays HOM05D003159 ORTHO05D003780 2.3e-106 389.8 265 67.2
FAN11G2158 Fragaria x ananassa HOM05D003159 ORTHO05D003780 3.0e-106 389.4 323 62.5
AagrBONN_evm.TU.Sc2ySwM_368.1733 Anthoceros agrestis HOM05D003159 ORTHO05D003780 4.0e-106 389.0 284 64.8
Aa31LG8G11740 Aethionema arabicum HOM05D003159 ORTHO05D003780 5.7e-105 385.2 371 56.1
SMO270G0125 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 1.4e-103 380.6 279 62.4
CBR_g8948 Chara braunii HOM05D003159 ORTHO05D003780 3.2e-103 379.4 281 64.8
Pp3c2_24240 Physcomitrium patens HOM05D003159 ORTHO05D003780 1.3e-101 374.0 282 64.2
Lj3C918G0 Lonicera japonica HOM05D003159 ORTHO05D003780 6.8e-98 361.7 293 64.2
COL.COLO4_15406 Corchorus olitorius HOM05D003159 ORTHO05D003780 1.1e-95 354.4 299 62.5
CSS0018975 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 4.6e-94 349.0 311 59.2
Nitab4.5_0007901g0030 Nicotiana tabacum HOM05D003159 ORTHO05D003780 3.0e-93 346.3 310 58.4
AUR62033998 Chenopodium quinoa HOM05D003159 ORTHO05D003780 4.9e-88 328.9 284 60.2
SMO358G0312 Selaginella moellendorffii HOM05D003159 ORTHO05D003780 6.4e-88 328.6 280 54.6
FAN12G4313 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.5e-84 316.6 196 76.5
FAN20G0704 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.7e-83 312.4 257 61.5
Cre12.g503300 Chlamydomonas reinhardtii HOM05D003159 ORTHO05D003780 7.1e-79 298.5 316 46.8
DCAR_028952 Daucus carota HOM05D003159 ORTHO05D003780 2.8e-75 286.6 202 65.3
PRCOL_00005277 Prasinoderma coloniale HOM05D003159 ORTHO05D003780 9.9e-73 278.1 283 51.9
MCO10G267 Micromonas commoda HOM05D003159 ORTHO05D003780 1.4e-71 274.2 265 48.3
Peaxi162Scf00135g01116 Petunia axillaris HOM05D003159 ORTHO05D003780 2.4e-71 273.5 210 66.7
Sabra19G0025800 Salix brachista HOM05D003159 ORTHO05D003780 3.4e-65 253.1 171 73.1
SHI06091 Sapria himalayana HOM05D003159 ORTHO05D003780 6.4e-64 248.8 193 60.6
SEGI_17525 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 5.4e-63 245.7 171 66.1
FAN02G3581 Fragaria x ananassa HOM05D001720 ORTHO05D001813 2.3e-61 240.4 257 51.4
Haze_20967 Corylus avellana HOM05D003159 ORTHO05D003780 3.9e-61 239.6 164 70.1
Cfa025150 Carpinus fangiana HOM05D003159 ORTHO05D003780 1.5e-60 237.7 285 46.3
CSS0009274 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 1.8e-58 230.7 173 65.3
Lalb_Chr06g0166701 Lupinus albus HOM05D003159 ORTHO05D003780 3.0e-53 213.4 162 68.5
Ciclev10003992m.g Citrus clementina HOM05D003159 ORTHO05D003780 1.1e-50 204.9 206 54.4
TPR.G10778 Trifolium pratense HOM05D003159 ORTHO05D003780 1.4e-47 194.5 123 72.4
Atru.chr2.869 Acer truncatum HOM05D003159 ORTHO05D003780 9.3e-47 191.8 156 64.7
FAN09G4428 Fragaria x ananassa HOM05D003159 ORTHO05D003780 2.3e-45 187.2 183 54.6
Nn1g02653 Nelumbo nucifera HOM05D003159 ORTHO05D003780 9.7e-44 181.8 185 55.1
Rhsim05G0177800 Rhododendron simsii HOM05D003159 ORTHO05D000029 2.8e-43 180.3 139 66.2
AUR62033001 Chenopodium quinoa HOM05D003159 ORTHO05D044021 7.6e-41 172.2 158 57.0
CSS0027773 Camellia sinensis var. sinensis HOM05D003159 ORTHO05D003780 3.8e-40 169.9 156 56.4
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 7.4e-36 155.6 215 42.8
Lalb_Chr06g0166711 Lupinus albus HOM05D003159 ORTHO05D003780 1.3e-35 154.8 97 71.1
Lalb_Chr06g0166751 Lupinus albus HOM05D003159 ORTHO05D003780 1.3e-35 154.8 97 71.1
RcHm_v2.0_Chr6g0278951 Rosa chinensis HOM05D003159 ORTHO05D003780 6.5e-32 142.5 134 56.7
Lalb_Chr06g0166741 Lupinus albus HOM05D003159 ORTHO05D003780 5.5e-31 139.4 88 72.7
FAN09G3226 Fragaria x ananassa HOM05D003159 ORTHO05D003780 4.7e-30 136.3 87 75.9
Atru.chr2.868 Acer truncatum HOM05D003159 ORTHO05D003780 1.7e-27 127.9 99 61.6
RcHm_v2.0_Chr7g0214531 Rosa chinensis HOM05D003159 ORTHO05D003780 6.3e-27 125.9 111 60.4
Nitab4.5_0000261g0140 Nicotiana tabacum HOM05D003159 ORTHO05D003780 7.7e-25 119.0 103 60.2
Lalb_Chr06g0166731 Lupinus albus HOM05D003159 ORTHO05D003780 2.2e-24 117.5 95 67.4
SEGI_37742 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 2.1e-22 110.9 77 68.8
DCAR_028953 Daucus carota HOM05D003159 ORTHO05D003780 6.1e-22 109.4 70 77.1
SHI06090 Sapria himalayana HOM05D003159 ORTHO05D003780 2.3e-21 107.5 68 75.0
SEGI_03130 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 4.8e-19 99.8 63 74.6
Lsat_1_v5_gn_9_121981 Lactuca sativa HOM05D003159 ORTHO05D003780 1.7e-16 91.3 51 84.3
AUR62010228 Chenopodium quinoa HOM05D003159 ORTHO05D003780 5.0e-16 89.7 89 50.6
QL03p028499 Quercus lobata HOM05D003159 ORTHO05D003780 1.1e-15 88.6 70 65.7
Lsat_1_v5_gn_3_106720 Lactuca sativa HOM05D003159 ORTHO05D003780 3.6e-14 83.6 113 43.4
Nitab4.5_0001462g0060 Nicotiana tabacum HOM05D003159 ORTHO05D003780 1.5e-12 78.2 50 66.0
SEGI_11174 Sequoiadendron giganteum HOM05D003159 ORTHO05D003780 1.4e-10 71.6 47 68.1
Haze_27599 Corylus avellana HOM05D003159 ORTHO05D003780 4.1e-10 70.1 99 37.4
PGSC0003DMG400002182 Solanum tuberosum HOM05D003159 ORTHO05D003780 5.5e-07 59.7 35 80.0


User provided reference genes

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