Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.1e-32 141.7 69 100.0
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.3e-26 122.5 62 95.2
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.9e-22 108.6 61 85.2
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 5.6e-22 107.1 59 84.7
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 9.6e-22 106.3 61 83.6
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 2.1e-21 105.1 59 84.7
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 3.6e-21 104.4 59 81.4
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 4.7e-21 104.0 59 83.1
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 4.7e-21 104.0 59 83.1
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 8.1e-21 103.2 59 81.4
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.1e-20 102.8 59 81.4
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.1e-20 102.8 61 78.7
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.1e-20 102.8 60 80.0
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 1.4e-20 102.4 60 80.0
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.8e-20 102.1 61 78.7
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.4e-20 101.7 59 79.7
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 2.4e-20 101.7 59 81.4
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.4e-20 101.7 59 81.4
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.1e-20 101.3 61 75.4
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 3.1e-20 101.3 59 81.4
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 3.1e-20 101.3 61 77.0
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 3.1e-20 101.3 61 77.0
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 3.1e-20 101.3 61 77.0
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 3.1e-20 101.3 59 81.4
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 4.0e-20 100.9 59 79.7
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 4.0e-20 100.9 59 79.7
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 4.0e-20 100.9 59 81.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 4.0e-20 100.9 59 79.7
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 4.0e-20 100.9 60 81.7
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 5.2e-20 100.5 60 78.3
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 5.2e-20 100.5 60 78.3
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 5.2e-20 100.5 60 78.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 5.2e-20 100.5 59 79.7
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 5.2e-20 100.5 59 79.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 5.2e-20 100.5 59 79.7
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 5.2e-20 100.5 59 79.7
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 5.2e-20 100.5 59 79.7
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 6.9e-20 100.1 59 78.0
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 6.9e-20 100.1 59 79.7
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 6.9e-20 100.1 59 79.7
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 6.9e-20 100.1 58 79.3
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 8.9e-20 99.8 59 78.0
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 8.9e-20 99.8 61 75.4
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 8.9e-20 99.8 59 79.7
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 8.9e-20 99.8 57 80.7
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.2e-19 99.4 59 79.7
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 1.2e-19 99.4 59 79.7
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.2e-19 99.4 58 79.3
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 1.2e-19 99.4 61 75.4
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 1.2e-19 99.4 59 78.0
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.2e-19 99.4 59 78.0
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.2e-19 99.4 59 78.0
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.5e-19 99.0 57 77.2
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.5e-19 99.0 59 74.6
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.0e-19 98.6 61 77.0
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.0e-19 98.6 59 76.3
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.6e-19 98.2 60 76.7
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 3.4e-19 97.8 57 75.4
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 4.4e-19 97.4 61 73.8
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 4.4e-19 97.4 58 77.6
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 4.4e-19 97.4 59 78.0
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 5.8e-19 97.1 58 81.0
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.8e-19 97.1 58 79.3
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 5.8e-19 97.1 57 78.9
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 7.6e-19 96.7 57 77.2
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 7.6e-19 96.7 62 71.0
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 7.6e-19 96.7 62 71.0
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 7.6e-19 96.7 58 75.9
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 9.9e-19 96.3 57 75.4
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 9.9e-19 96.3 58 74.1
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 9.9e-19 96.3 57 75.4
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 9.9e-19 96.3 58 74.1
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 9.9e-19 96.3 58 74.1
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 9.9e-19 96.3 57 75.4
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 9.9e-19 96.3 58 79.3
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 9.9e-19 96.3 58 74.1
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 9.9e-19 96.3 62 71.0
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.7e-18 95.5 57 75.4
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 1.7e-18 95.5 59 72.9
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.7e-18 95.5 59 76.3
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 2.2e-18 95.1 57 75.4
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 2.2e-18 95.1 57 75.4
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 2.2e-18 95.1 59 74.6
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 2.2e-18 95.1 61 72.1
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.8e-18 94.4 58 75.9
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 4.9e-18 94.0 61 70.5
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 4.9e-18 94.0 59 76.3
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 6.4e-18 93.6 57 71.9
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 6.4e-18 93.6 55 78.2
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 8.4e-18 93.2 56 75.0
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 1.1e-17 92.8 57 71.9
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.1e-17 92.8 70 65.7
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.4e-17 92.4 57 77.2
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.9e-17 92.0 67 68.7
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.9e-17 92.0 57 70.2
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 3.2e-17 91.3 57 73.7
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 1.6e-16 89.0 54 77.8
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.7e-16 88.2 53 75.5
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.0e-15 86.3 97 51.5
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.0e-15 86.3 54 72.2
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 1.7e-15 85.5 92 52.2
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 3.3e-14 81.3 51 72.5
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.6e-13 79.0 54 68.5
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.6e-13 77.8 58 62.1
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 4.8e-13 77.4 106 44.3
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.3e-12 73.9 42 81.0
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.3e-12 73.9 42 81.0
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.2e-11 72.8 41 85.4
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 4.5e-11 70.9 41 78.0
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.3e-10 69.3 42 73.8
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 2.7e-08 61.6 41 70.7
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 3.9e-07 57.8 56 42.9
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.5e-06 55.1 30 83.3


User provided reference genes

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