Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 0.0e+00 1132.5 586 100.0
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 2.5e-235 818.9 547 77.3
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 5.5e-235 817.8 549 77.0
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 4.1e-230 801.6 550 74.9
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 1.3e-228 796.6 558 73.8
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 1.5e-224 783.1 553 73.4
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 1.9e-224 782.7 547 74.4
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 2.8e-223 778.9 552 73.4
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 1.1e-222 776.9 556 72.8
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 1.1e-222 776.9 549 73.2
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 1.8e-222 776.2 551 73.0
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 3.1e-222 775.4 549 73.8
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 3.1e-222 775.4 551 73.9
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 6.9e-222 774.2 552 72.8
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 6.9e-222 774.2 555 72.3
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 9.0e-222 773.9 552 72.6
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 1.2e-221 773.5 548 72.8
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 1.7e-220 769.6 549 72.9
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 5.0e-220 768.1 550 72.7
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 4.2e-219 765.0 550 72.0
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 4.6e-218 761.5 555 71.4
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 7.9e-218 760.8 547 73.1
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 3.0e-217 758.8 558 71.3
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 6.7e-217 757.7 549 71.2
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 8.8e-217 757.3 550 70.4
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 3.3e-216 755.4 561 70.9
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 4.4e-216 755.0 550 69.8
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 9.7e-216 753.8 566 70.1
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 6.3e-215 751.1 562 70.1
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 1.1e-214 750.4 562 70.1
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 1.8e-214 749.6 549 71.8
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 1.8e-214 749.6 560 68.9
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 2.4e-214 749.2 550 69.1
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 2.0e-213 746.1 555 70.1
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 2.6e-213 745.7 547 70.9
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 3.4e-213 745.3 550 70.0
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 5.9e-213 744.6 556 69.4
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 5.9e-213 744.6 557 69.5
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 7.7e-213 744.2 549 70.9
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 8.5e-212 740.7 552 69.4
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 1.1e-211 740.3 552 69.4
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 1.1e-211 740.3 552 69.9
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 1.4e-211 740.0 552 70.8
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 1.4e-211 740.0 547 70.6
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 1.9e-211 739.6 555 68.8
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 2.5e-211 739.2 549 68.7
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 3.2e-211 738.8 552 69.4
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 4.2e-211 738.4 549 69.0
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 1.2e-210 736.9 558 69.5
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 1.2e-210 736.9 555 68.6
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 2.7e-210 735.7 549 68.7
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 6.1e-210 734.6 557 69.5
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 1.0e-209 733.8 557 69.5
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 1.0e-209 733.8 557 69.5
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 1.0e-209 733.8 557 69.1
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 2.3e-209 732.6 549 68.3
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 3.9e-209 731.9 615 65.0
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 3.9e-209 731.9 551 68.8
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 6.7e-209 731.1 557 69.1
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 1.1e-208 730.3 558 68.8
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 1.1e-208 730.3 556 68.7
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 1.1e-208 730.3 549 68.1
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 1.5e-208 729.9 552 69.9
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 7.4e-208 727.6 558 68.6
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 1.3e-207 726.9 557 68.6
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 6.3e-207 724.5 577 66.6
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 6.3e-207 724.5 558 67.6
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 7.0e-206 721.1 548 68.8
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 7.7e-205 717.6 564 65.1
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 1.1e-203 713.8 558 67.6
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 1.9e-203 713.0 552 68.1
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 4.0e-201 705.3 552 65.8
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 4.4e-200 701.8 579 64.9
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 9.7e-200 700.7 591 65.8
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 4.8e-199 698.4 558 65.1
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 3.1e-198 695.7 548 66.8
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 5.3e-198 694.9 550 65.3
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 2.5e-195 686.0 554 66.2
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 7.5e-192 674.5 560 63.2
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.4e-190 670.2 558 64.7
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 3.5e-189 665.6 523 68.6
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 5.9e-189 664.8 568 62.9
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 5.9e-189 664.8 570 64.2
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 2.9e-188 662.5 587 63.4
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 3.0e-185 652.5 546 63.2
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 3.7e-183 645.6 590 62.4
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 2.7e-181 639.4 497 68.0
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 4.6e-173 612.1 433 73.9
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.7e-159 567.0 433 69.3
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 2.9e-159 566.2 554 54.3
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 2.1e-157 560.1 550 55.3
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 3.0e-148 529.6 671 48.3
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.9e-147 526.9 547 53.6
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 1.1e-142 511.1 559 51.9
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 6.6e-140 501.9 552 48.9
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 4.6e-109 399.4 326 65.6
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 2.2e-103 380.6 275 70.2
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 7.4e-99 365.5 261 71.6
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 1.1e-91 341.7 280 62.5
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 1.3e-79 301.6 218 70.6
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 6.6e-63 246.1 199 64.3
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 9.5e-54 215.7 162 67.3
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 4.6e-48 196.8 240 41.7
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 8.3e-42 176.0 292 44.5
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 2.7e-40 171.0 120 69.2
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 7.3e-38 162.9 120 66.7
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 5.4e-33 146.7 118 61.9
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 7.1e-33 146.4 142 54.2
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 2.3e-31 141.4 119 63.0
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 4.9e-26 123.6 175 45.1
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 1.2e-24 119.0 117 58.1
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 5.1e-23 113.6 81 67.9
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 7.3e-22 109.8 180 39.4
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 4.0e-20 104.0 190 38.4
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 3.5e-16 90.9 117 44.4
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 1.6e-13 82.0 82 53.7
SMO111G0176 Selaginella moellendorffii HOM05D013632 ORTHO05D008295 1.6e-13 82.0 96 45.8
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.1e-12 79.3 142 40.1
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 2.2e-10 71.6 65 66.2
SMO118G0508 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.4e-09 68.9 211 29.9
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 9.3e-09 66.2 45 68.9
SMO122G0015 Selaginella moellendorffii HOM05D006362 ORTHO05D374567 1.6e-08 65.5 129 32.6
SMO014G0021 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 6.0e-08 63.5 176 34.1
SMO009G0006 Selaginella moellendorffii HOM05D013632 ORTHO05D379378 6.7e-07 60.1 154 35.1
Cpa.g.sc131.91 Carica papaya HOM05D006362 ORTHO05D116658 2.5e-06 58.2 37 70.3


User provided reference genes

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