Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0764 Ceratophyllum demersum HOM05D004110 ORTHO05D004810 0.0e+00 1197.6 621 100.0
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 1.8e-188 663.3 727 48.8
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 3.7e-181 639.0 727 46.6
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 3.7e-181 639.0 722 48.1
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 8.2e-181 637.9 722 48.1
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 1.1e-174 617.5 723 45.6
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 7.4e-174 614.8 709 46.4
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 1.2e-171 607.4 704 47.3
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 5.0e-170 602.1 705 46.8
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 8.5e-170 601.3 705 46.7
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 3.2e-169 599.4 712 46.5
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 7.2e-169 598.2 709 45.1
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 4.0e-167 592.4 717 45.7
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 6.7e-167 591.7 716 45.1
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 8.8e-167 591.3 736 45.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.6e-166 589.7 707 46.3
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 2.6e-166 589.7 715 44.8
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 3.3e-166 589.3 716 45.5
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.3e-165 587.4 681 47.6
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.7e-165 587.0 716 45.4
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.4e-164 583.9 707 45.7
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 5.3e-164 582.0 716 44.4
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 3.5e-163 579.3 718 45.4
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 5.9e-163 578.6 709 44.6
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 8.0e-160 568.2 739 43.3
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 3.0e-159 566.2 712 44.2
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 5.2e-159 565.5 715 43.1
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 8.8e-159 564.7 713 44.3
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.2e-158 564.3 718 44.3
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.2e-158 564.3 718 44.3
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 1.5e-158 563.9 718 44.7
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.5e-158 563.9 712 44.1
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 2.6e-158 563.1 716 43.4
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 2.6e-158 563.1 801 41.4
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 4.4e-158 562.4 716 43.4
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 4.4e-158 562.4 716 43.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 4.4e-158 562.4 716 43.4
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 4.4e-158 562.4 673 45.2
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 1.7e-157 560.5 712 44.5
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 1.1e-156 557.8 717 42.8
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 1.1e-156 557.8 710 43.8
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 1.4e-156 557.4 717 43.4
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 1.8e-156 557.0 718 43.0
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 2.4e-156 556.6 712 44.0
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 5.4e-156 555.4 673 46.2
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 1.2e-155 554.3 730 42.6
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.6e-155 553.9 716 42.5
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 1.6e-155 553.9 712 44.4
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 3.5e-155 552.7 713 43.1
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.3e-154 550.8 715 42.8
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 1.7e-154 550.4 730 43.0
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 8.6e-154 548.1 715 41.5
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.1e-153 547.7 711 42.2
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 2.5e-153 546.6 715 42.8
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 3.3e-153 546.2 717 42.4
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 9.5e-153 544.7 713 42.2
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 1.2e-152 544.3 709 43.6
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.6e-152 543.9 719 43.0
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 2.8e-152 543.1 718 42.2
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 6.1e-152 542.0 704 43.3
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 8.0e-152 541.6 712 43.1
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 1.0e-151 541.2 790 40.9
vmacro17378 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 2.3e-151 540.0 590 47.8
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 1.8e-148 530.4 717 40.4
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 5.4e-148 528.9 743 40.6
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 1.2e-147 527.7 713 41.8
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.7e-147 526.6 524 52.9
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 3.9e-146 522.7 703 41.3
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 2.8e-144 516.5 710 41.3
Nitab4.5_0006590g0020 Nicotiana tabacum HOM05D004110 ORTHO05D004810 8.9e-143 511.5 732 40.0
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 2.0e-142 510.4 802 37.8
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 4.4e-142 509.2 536 49.1
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 1.3e-141 507.7 722 40.3
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 8.3e-141 505.0 563 47.1
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 8.3e-141 505.0 523 49.3
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 1.9e-140 503.8 711 40.6
Haze_02194 Corylus avellana HOM05D004110 ORTHO05D004810 4.6e-139 499.2 653 42.6
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.5e-137 493.4 803 37.1
MD10G1119400 Malus domestica HOM05D004110 ORTHO05D004810 1.6e-136 490.7 520 50.0
HPP92_005008 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.4e-132 477.6 708 38.3
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 2.3e-130 470.3 711 38.7
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 2.8e-120 436.8 472 50.8
SEGI_22139 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 3.6e-112 409.8 714 32.8
CAN.G603.2 Capsicum annuum HOM05D004110 ORTHO05D004810 1.4e-111 407.9 596 39.3
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 2.0e-102 377.5 619 35.7
Cpa.g.sc37.188 Carica papaya HOM05D004110 ORTHO05D004810 5.8e-102 375.9 472 44.3
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 6.4e-101 372.5 717 32.2
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 2.5e-92 344.0 733 31.0
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 2.0e-86 324.3 435 43.2
Glyma.11G098551 Glycine max HOM05D004110 ORTHO05D004810 6.5e-85 319.3 295 53.9
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.8e-74 284.6 556 31.8
SHI05691 Sapria himalayana HOM05D004110 ORTHO05D004810 1.2e-70 271.9 299 45.5
CSS0003289 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 8.8e-58 229.2 188 58.0
ClCG02G011580 Citrullus lanatus HOM05D004110 ORTHO05D004810 4.4e-57 226.9 215 52.6
Duzib248G1214 Durio zibethinus HOM05D004110 ORTHO05D004810 7.0e-47 193.0 171 57.3
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 3.5e-38 164.1 232 41.4
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 3.6e-35 154.1 374 28.9
COL.COLO4_17260 Corchorus olitorius HOM05D004110 ORTHO05D004810 2.6e-33 147.9 489 27.0
CSS0015162 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 2.9e-24 117.9 100 56.0
MD10G1119100 Malus domestica HOM05D004110 ORTHO05D004810 2.3e-21 108.2 129 41.1
CSS0008861 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 5.6e-20 103.6 120 40.0
ClCG02G011590 Citrullus lanatus HOM05D004110 ORTHO05D004810 7.3e-20 103.2 92 53.3
Zm00001eb026660 Zea mays HOM05D004110 ORTHO05D004810 3.6e-19 100.9 104 44.2
Gohir.A12G039250 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.2e-19 100.1 97 50.5
Hma1.2p1_0032F.1_g019640 Hydrangea macrophylla HOM05D004110 ORTHO05D004810 8.1e-19 99.8 98 46.9
arahy.Tifrunner.gnm1.ann1.G8A5JV Arachis hypogaea HOM05D004110 ORTHO05D004810 2.6e-17 94.7 89 46.1
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 8.3e-16 89.7 134 43.3
CSS0014003 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.1e-15 89.4 91 48.4
Solyc11g039890.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 3.2e-15 87.8 119 37.0
ClCG02G011550 Citrullus lanatus HOM05D004110 ORTHO05D004810 2.7e-14 84.7 158 34.8
Os10g0154566 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 6.0e-14 83.6 99 41.4
Psat1g093160 Pisum sativum HOM05D004110 ORTHO05D004810 1.2e-11 75.9 71 52.1
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 3.1e-10 71.2 114 36.8
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 4.0e-10 70.9 98 48.0
BolC8t52466H Brassica oleracea HOM05D004110 ORTHO05D004810 7.6e-09 66.6 51 56.9
SHI05692 Sapria himalayana HOM05D004110 ORTHO05D004810 1.3e-08 65.9 72 43.1
VMungo0464G1786 Vigna mungo HOM05D004110 ORTHO05D004810 3.7e-08 64.3 72 48.6
HanXRQChr09g0252681 Helianthus annuus HOM05D004110 ORTHO05D004810 1.1e-07 62.8 59 39.0


User provided reference genes

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