Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 3.3e-118 428.3 207 100.0
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 79.9
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 1.3e-95 353.2 209 79.4
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 80.9
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 8.7e-95 350.5 209 79.9
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 1.5e-94 349.7 209 79.9
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.3e-94 348.6 207 77.3
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 5.7e-94 347.8 209 78.0
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 7.4e-94 347.4 209 78.0
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.3e-93 346.7 209 78.0
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 3.7e-93 345.1 209 78.0
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 3.7e-93 345.1 209 79.4
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 6.3e-93 344.4 209 77.5
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 8.2e-93 344.0 209 78.5
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 8.2e-93 344.0 209 78.5
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 8.2e-93 344.0 209 78.5
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 8.2e-93 344.0 209 78.5
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 8.2e-93 344.0 208 77.4
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 8.2e-93 344.0 209 78.0
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.4e-92 343.2 209 78.0
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.4e-92 343.2 208 76.9
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 3.1e-92 342.0 209 77.5
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 3.1e-92 342.0 209 77.0
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 4.1e-92 341.7 209 77.5
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 6.9e-92 340.9 209 76.6
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 6.9e-92 340.9 209 76.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 9.0e-92 340.5 209 76.6
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 9.0e-92 340.5 209 77.5
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 9.0e-92 340.5 209 77.0
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.2e-91 340.1 209 77.5
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.2e-91 340.1 208 76.9
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 2.6e-91 339.0 208 76.9
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.6e-91 339.0 209 77.5
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 4.5e-91 338.2 208 76.9
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 7.6e-91 337.4 209 77.5
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 7.6e-91 337.4 209 77.5
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 1.3e-90 336.7 209 76.1
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.3e-90 336.7 209 76.6
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.7e-90 336.3 208 76.0
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 2.9e-90 335.5 209 76.1
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 2.9e-90 335.5 209 76.6
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 2.9e-90 335.5 209 76.6
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 3.8e-90 335.1 208 77.4
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 3.8e-90 335.1 209 76.6
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 5.0e-90 334.7 208 76.0
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 8.5e-90 334.0 209 75.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-89 333.6 209 75.6
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-89 333.6 209 75.6
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.4e-89 333.2 209 77.0
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.9e-89 332.8 209 76.1
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 1.9e-89 332.8 209 75.6
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.5e-89 332.4 220 72.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 3.2e-89 332.0 209 74.6
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 5.5e-89 331.3 209 75.1
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 9.3e-89 330.5 209 75.6
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 9.3e-89 330.5 209 74.2
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.6e-88 329.7 209 75.1
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 1.6e-88 329.7 209 74.6
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.6e-88 329.7 208 74.5
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 1.6e-88 329.7 225 70.7
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 2.1e-88 329.3 208 74.0
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 2.7e-88 328.9 209 75.1
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 4.6e-88 328.2 209 74.6
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 4.6e-88 328.2 209 74.6
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 4.6e-88 328.2 209 73.7
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 7.9e-88 327.4 209 74.6
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 7.9e-88 327.4 209 74.2
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.0e-87 327.0 209 73.7
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.3e-87 326.6 229 69.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.8e-87 326.2 210 75.2
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 3.0e-87 325.5 209 74.2
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 3.9e-87 325.1 209 74.6
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 3.9e-87 325.1 209 73.7
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 3.9e-87 325.1 209 73.2
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 5.1e-87 324.7 205 74.6
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.7e-87 324.3 209 73.2
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.7e-87 324.3 209 73.2
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 6.7e-87 324.3 229 69.0
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.9e-86 322.8 209 74.6
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 1.9e-86 322.8 209 73.2
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 1.9e-86 322.8 243 65.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.5e-86 322.4 209 72.7
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.3e-86 322.0 239 66.5
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 3.3e-86 322.0 209 74.2
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 4.3e-86 321.6 191 79.6
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 4.8e-85 318.2 209 72.7
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.4e-84 315.8 209 70.8
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 2.4e-84 315.8 187 79.7
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 6.9e-84 314.3 206 72.3
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.5e-83 313.2 209 71.8
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 1.5e-83 313.2 205 71.2
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.6e-83 312.4 187 79.7
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 3.4e-83 312.0 188 78.7
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 6.5e-82 307.8 203 71.4
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 8.5e-82 307.4 190 76.8
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.1e-81 307.0 209 69.4
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 7.9e-80 300.8 196 73.5
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 1.8e-79 299.7 190 73.2
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.8e-79 299.7 187 74.9
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 3.0e-79 298.9 288 55.2
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.5e-78 296.6 193 73.1
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 1.4e-76 290.0 185 74.6
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 1.2e-75 287.0 205 65.4
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 3.6e-72 275.4 207 66.2
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 3.0e-71 272.3 165 78.8
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 2.0e-70 269.6 190 69.5
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 1.2e-67 260.4 150 82.0
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 1.1e-65 253.8 165 73.9
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.5e-65 253.4 178 68.5
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.6e-64 250.0 202 58.9
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 2.4e-60 236.1 167 67.7
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 7.7e-59 231.1 208 55.8
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 1.9e-57 226.5 206 53.9
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 1.8e-55 219.9 209 56.5
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 7.5e-54 214.5 135 76.3
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.1e-52 210.7 206 51.5
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 8.6e-42 174.5 205 46.3
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 5.6e-41 171.8 152 57.9
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 4.0e-39 165.6 205 39.5
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.5e-33 146.4 124 51.6
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 2.1e-32 143.3 150 52.7
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 3.4e-30 136.0 135 51.9
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 5.8e-30 135.2 127 55.9
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 7.0e-28 128.3 84 72.6
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 4.6e-27 125.6 225 33.8
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 6.0e-27 125.2 84 70.2
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.4e-23 114.0 74 70.3
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.0e-14 83.6 76 55.3
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 6.4e-13 78.6 43 79.1


User provided reference genes

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