Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0466 Ceratophyllum demersum HOM05D004428 ORTHO05D130153 2.4e-78 295.8 196 100.0
CDE05G2560 Ceratophyllum demersum HOM05D004428 ORTHO05D006381 2.3e-20 103.2 63 87.3
TAR381G0098 Trochodendron aralioides HOM05D004428 ORTHO05D006381 1.4e-12 77.4 61 67.2
CiPaw.07G139000 Carya illinoinensis HOM05D004428 ORTHO05D006381 2.3e-12 76.6 61 65.6
Actinidia15489 Actinidia chinensis HOM05D004428 ORTHO05D006381 5.1e-12 75.5 61 65.6
Potri.005G250100 Populus trichocarpa HOM05D004428 ORTHO05D006381 5.1e-12 75.5 61 65.6
FvH4_5g12620 Fragaria vesca HOM05D004428 ORTHO05D006381 8.8e-12 74.7 61 67.2
FAN08G2755 Fragaria x ananassa HOM05D004428 ORTHO05D006381 8.8e-12 74.7 61 67.2
FAN18G3186 Fragaria x ananassa HOM05D004428 ORTHO05D006381 8.8e-12 74.7 61 67.2
Nn5g30938 Nelumbo nucifera HOM05D004428 ORTHO05D006381 8.8e-12 74.7 61 65.6
Sabra05G0193700 Salix brachista HOM05D004428 ORTHO05D006381 1.1e-11 74.3 72 58.3
Atru.chr13.133 Acer truncatum HOM05D004428 ORTHO05D006381 2.5e-11 73.2 61 63.9
Actinidia17038 Actinidia chinensis HOM05D004428 ORTHO05D006381 2.5e-11 73.2 61 63.9
Manes.18G005500 Manihot esculenta HOM05D004428 ORTHO05D006381 2.5e-11 73.2 61 62.3
Dinv31938 Davidia involucrata HOM05D004428 ORTHO05D006381 3.3e-11 72.8 61 59.0
RcHm_v2.0_Chr7g0184701 Rosa chinensis HOM05D004428 ORTHO05D006381 3.3e-11 72.8 61 67.2
Ciclev10000330m.g Citrus clementina HOM05D004428 ORTHO05D006381 4.3e-11 72.4 61 62.3
Rhsim06G0007600 Rhododendron simsii HOM05D004428 ORTHO05D006381 5.7e-11 72.0 61 62.3
CAN.G311.114 Capsicum annuum HOM05D004428 ORTHO05D006381 7.4e-11 71.6 61 60.7
FAN18G0222 Fragaria x ananassa HOM05D004428 ORTHO05D006381 7.4e-11 71.6 61 65.6
Lalb_Chr11g0061651 Lupinus albus HOM05D004428 ORTHO05D006381 7.4e-11 71.6 61 59.0
Prupe.5G218100 Prunus persica HOM05D004428 ORTHO05D006381 7.4e-11 71.6 61 63.9
Ah.14g084500 Amaranthus hybridus HOM05D004428 ORTHO05D006381 9.7e-11 71.2 57 64.9
Duzib116G0794 Durio zibethinus HOM05D004428 ORTHO05D006381 9.7e-11 71.2 61 60.7
Glyma.04G018100 Glycine max HOM05D004428 ORTHO05D006381 9.7e-11 71.2 61 62.3
Glyma.06G018400 Glycine max HOM05D004428 ORTHO05D006381 9.7e-11 71.2 61 62.3
GSVIVG01013363001 Vitis vinifera HOM05D004428 ORTHO05D006381 9.7e-11 71.2 61 60.7
arahy.Tifrunner.gnm1.ann1.W2TUZB Arachis hypogaea HOM05D004428 ORTHO05D006381 1.3e-10 70.9 61 60.7
arahy.Tifrunner.gnm1.ann1.ZHV6CG Arachis hypogaea HOM05D004428 ORTHO05D006381 1.3e-10 70.9 61 60.7
THA.LOC104806921 Tarenaya hassleriana HOM05D004428 ORTHO05D006381 1.3e-10 70.9 61 55.7
VMungo1309G3122 Vigna mungo HOM05D004428 ORTHO05D006381 1.3e-10 70.9 61 62.3
Lj1g0006576 Lotus japonicus HOM05D004428 ORTHO05D006381 1.7e-10 70.5 61 62.3
CSS0024308 Camellia sinensis var. sinensis HOM05D004428 ORTHO05D006381 2.2e-10 70.1 61 62.3
CSS0033739 Camellia sinensis var. sinensis HOM05D004428 ORTHO05D006381 2.2e-10 70.1 61 62.3
EL10Ac1g01970 Beta vulgaris HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 59.0
Cfa014074 Carpinus fangiana HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 59.0
MD06G1211900 Malus domestica HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 62.3
QL08p042264 Quercus lobata HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 63.9
Solyc04g082330.3 Solanum lycopersicum HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 55.7
Sopen04g035950 Solanum pennellii HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 55.7
PGSC0003DMG400009978 Solanum tuberosum HOM05D004428 ORTHO05D006381 2.8e-10 69.7 61 55.7
vmacro21813 Vaccinium macrocarpon HOM05D004428 ORTHO05D006381 2.8e-10 69.7 57 63.2
Gohir.D01G092100 Gossypium hirsutum HOM05D004428 ORTHO05D006381 3.7e-10 69.3 61 59.0
Sc15g0004460 Simmondsia chinensis HOM05D004428 ORTHO05D006381 3.7e-10 69.3 61 57.4
Gohir.A01G105900 Gossypium hirsutum HOM05D004428 ORTHO05D006381 4.8e-10 68.9 61 59.0
Gohir.D01G092200 Gossypium hirsutum HOM05D004428 ORTHO05D006381 4.8e-10 68.9 61 59.0
Gorai.002G117400 Gossypium raimondii HOM05D004428 ORTHO05D006381 4.8e-10 68.9 61 59.0
Gorai.002G117200 Gossypium raimondii HOM05D004428 ORTHO05D006381 6.3e-10 68.6 61 59.0
HanXRQChr14g0428331 Helianthus annuus HOM05D004428 ORTHO05D006381 6.3e-10 68.6 62 59.7
COL.COLO4_04008 Corchorus olitorius HOM05D004428 ORTHO05D006381 8.2e-10 68.2 61 59.0
Lsat_1_v5_gn_2_5041 Lactuca sativa HOM05D004428 ORTHO05D006381 8.2e-10 68.2 59 59.3
MD14G1222500 Malus domestica HOM05D004428 ORTHO05D006381 8.2e-10 68.2 61 60.7
Thecc.08G058600 Theobroma cacao HOM05D004428 ORTHO05D006381 8.2e-10 68.2 57 59.6
HanXRQChr06g0184011 Helianthus annuus HOM05D004428 ORTHO05D006381 1.1e-09 67.8 59 61.0
Eucgr.E02846 Eucalyptus grandis HOM05D004428 ORTHO05D006381 2.4e-09 66.6 57 64.9
Medtr3g115250 Medicago truncatula HOM05D004428 ORTHO05D006381 2.4e-09 66.6 61 57.4
Nitab4.5_0000588g0120 Nicotiana tabacum HOM05D004428 ORTHO05D006381 2.4e-09 66.6 61 54.1
AUR62036878 Chenopodium quinoa HOM05D004428 ORTHO05D006381 3.1e-09 66.2 61 59.0
AUR62043175 Chenopodium quinoa HOM05D004428 ORTHO05D006381 3.1e-09 66.2 61 59.0
MBI08_g41523_MAGBIO Magnolia biondii HOM05D004428 ORTHO05D006381 3.1e-09 66.2 62 58.1
Ca_15435_v3 Cicer arietinum L. HOM05D004428 ORTHO05D006381 4.1e-09 65.9 59 61.0
Ca_15460_v3 Cicer arietinum L. HOM05D004428 ORTHO05D006381 4.1e-09 65.9 59 61.0
ECA238G2671 Erigeron canadensis HOM05D004428 ORTHO05D006381 4.1e-09 65.9 59 57.6
PSO170G5451 Papaver somniferum HOM05D004428 ORTHO05D006381 4.1e-09 65.9 61 55.7
Phvul.009G010600 Phaseolus vulgaris HOM05D004428 ORTHO05D006381 4.1e-09 65.9 61 59.0
Aqoxy5G01044 Aquilegia oxysepala HOM05D004428 ORTHO05D006381 6.9e-09 65.1 61 62.3
Cpa.g.sc26.200 Carica papaya HOM05D004428 ORTHO05D006381 6.9e-09 65.1 61 59.0
Migut.C00959 Erythranthe guttata HOM05D004428 ORTHO05D006381 6.9e-09 65.1 61 54.1
Gohir.A01G105800 Gossypium hirsutum HOM05D004428 ORTHO05D006381 6.9e-09 65.1 61 57.4
Oeu000690.4 Olea europaea HOM05D004428 ORTHO05D006381 9.1e-09 64.7 61 54.1
SGA_v2.0_scaffold108G30858 Striga asiatica HOM05D004428 ORTHO05D006381 9.1e-09 64.7 61 54.1
TPR.G33901 Trifolium pratense HOM05D004428 ORTHO05D006381 9.1e-09 64.7 55 61.8
Aa31LG5G19870 Aethionema arabicum HOM05D004428 ORTHO05D017237 1.2e-08 64.3 61 55.7
ATR0796G321 Amborella trichopoda HOM05D004428 ORTHO05D006381 1.5e-08 63.9 62 58.1
CDE08G0280 Ceratophyllum demersum HOM05D004428 ORTHO05D129595 1.5e-08 63.9 46 69.6
A06p03530 Brassica napus HOM05D004428 ORTHO05D006381 2.0e-08 63.5 61 59.0
BolC6t35594H Brassica oleracea HOM05D004428 ORTHO05D006381 2.0e-08 63.5 61 59.0
BraA06t23561Z Brassica rapa HOM05D004428 ORTHO05D006381 2.0e-08 63.5 61 59.0
EL10Ac2g02835 Beta vulgaris HOM05D004428 ORTHO05D006381 2.6e-08 63.2 61 54.1
Thhalv10011257m.g Eutrema salsugineum HOM05D004428 ORTHO05D006381 2.6e-08 63.2 61 55.7
FAN04G3173 Fragaria x ananassa HOM05D004428 ORTHO05D006381 2.6e-08 63.2 89 47.2
FAN13G0888 Fragaria x ananassa HOM05D004428 ORTHO05D006381 2.6e-08 63.2 89 47.2
Sed0021929 Sechium edule HOM05D004428 ORTHO05D006381 2.6e-08 63.2 61 57.4
BraA05t20951Z Brassica rapa HOM05D004428 ORTHO05D006381 3.4e-08 62.8 61 59.0
PSO210G2012 Papaver somniferum HOM05D004428 ORTHO05D006381 3.4e-08 62.8 61 52.5
BcaB02g11109 Brassica carinata HOM05D004428 ORTHO05D006381 4.5e-08 62.4 61 57.4
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 4.5e-08 62.4 59 59.3
Peaxi162Scf00893g00431 Petunia axillaris HOM05D004428 ORTHO05D006381 4.5e-08 62.4 61 52.5
Sp1g36710 Schrenkiella parvula HOM05D004428 ORTHO05D006381 4.5e-08 62.4 61 55.7
Cc10_g00690 Coffea canephora HOM05D004428 ORTHO05D006381 5.9e-08 62.0 61 54.1
MELO3C022402.2 Cucumis melo HOM05D004428 ORTHO05D006381 5.9e-08 62.0 61 57.4
CsaV3_6G007250 Cucumis sativus L. HOM05D004428 ORTHO05D006381 5.9e-08 62.0 61 57.4
Hund05114 Selenicereus undatus HOM05D004428 ORTHO05D006381 5.9e-08 62.0 59 54.2
ClCG06G001320 Citrullus lanatus HOM05D004428 ORTHO05D006381 7.7e-08 61.6 61 57.4
AT1G42440 Arabidopsis thaliana HOM05D004428 ORTHO05D006381 1.0e-07 61.2 61 54.1
MSTRG.4456 Avicennia marina HOM05D004428 ORTHO05D006381 1.0e-07 61.2 63 50.8
DCAR_016805 Daucus carota HOM05D004428 ORTHO05D006381 1.0e-07 61.2 54 61.1
PGR083G1674 Punica granatum HOM05D004428 ORTHO05D006381 1.0e-07 61.2 57 57.9
SalBow7G1176 Salvia bowleyana HOM05D004428 ORTHO05D006381 1.0e-07 61.2 61 49.2
Carub.0001s3423 Capsella rubella HOM05D004428 ORTHO05D006381 1.3e-07 60.8 61 54.1
AL1G51320 Arabidopsis lyrata HOM05D004428 ORTHO05D006381 1.7e-07 60.5 61 52.5
Psat5g158960 Pisum sativum HOM05D004428 ORTHO05D006381 1.7e-07 60.5 59 54.2
CARHR292410 Cardamine hirsuta HOM05D004428 ORTHO05D006381 5.0e-07 58.9 61 55.7
Lj6C24T17 Lonicera japonica HOM05D004428 ORTHO05D006381 5.0e-07 58.9 62 59.7
unitig_22.g5423 Utricularia gibba HOM05D004428 ORTHO05D006381 6.5e-07 58.5 57 54.4
CANSAT56G2267 Cannabis sativa HOM05D004428 ORTHO05D006381 8.5e-07 58.2 64 50.0
A05p20450 Brassica napus HOM05D004428 ORTHO05D006381 2.5e-06 56.6 56 57.1
Zm00001eb266050 Zea mays HOM05D004428 ORTHO05D006381 7.2e-06 55.1 61 47.5
BcaC05g27470 Brassica carinata HOM05D004428 ORTHO05D006381 9.4e-06 54.7 56 55.4
C05p34310 Brassica napus HOM05D004428 ORTHO05D006381 9.4e-06 54.7 56 55.4
C06p04650 Brassica napus HOM05D004428 ORTHO05D006381 9.4e-06 54.7 83 44.6
TWI12G0814 Tripterygium wilfordii HOM05D004428 ORTHO05D006381 9.4e-06 54.7 61 52.5


User provided reference genes

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