Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 3.7e-83 311.6 169 100.0
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 1.1e-21 107.5 87 62.1
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 3.1e-21 105.9 75 68.0
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 5.2e-21 105.1 78 64.1
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 5.2e-21 105.1 75 68.0
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 5.2e-21 105.1 84 61.9
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 5.2e-21 105.1 84 61.9
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 6.8e-21 104.8 84 61.9
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 8.9e-21 104.4 75 66.7
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 8.9e-21 104.4 76 63.2
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 1.2e-20 104.0 75 66.7
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.2e-20 104.0 84 60.7
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.5e-20 103.6 84 63.1
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.0e-20 103.2 75 68.0
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 2.0e-20 103.2 77 63.6
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 2.6e-20 102.8 104 52.9
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 2.6e-20 102.8 76 63.2
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 3.4e-20 102.4 84 60.7
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 3.4e-20 102.4 78 62.8
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 3.4e-20 102.4 82 62.2
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 4.4e-20 102.1 77 63.6
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 4.4e-20 102.1 75 65.3
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 5.8e-20 101.7 75 65.3
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 5.8e-20 101.7 98 54.1
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 5.8e-20 101.7 76 65.8
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 5.8e-20 101.7 76 64.5
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 7.5e-20 101.3 84 60.7
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 7.5e-20 101.3 84 60.7
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 7.5e-20 101.3 75 64.0
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 7.5e-20 101.3 75 64.0
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 7.5e-20 101.3 75 64.0
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 7.5e-20 101.3 76 64.5
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 7.5e-20 101.3 84 59.5
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 9.8e-20 100.9 93 54.8
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 9.8e-20 100.9 76 63.2
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 1.3e-19 100.5 75 65.3
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 1.3e-19 100.5 75 65.3
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.3e-19 100.5 76 63.2
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 1.3e-19 100.5 76 63.2
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.3e-19 100.5 76 64.5
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.3e-19 100.5 76 63.2
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.7e-19 100.1 76 63.2
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 2.2e-19 99.8 113 51.3
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 2.2e-19 99.8 76 61.8
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 2.2e-19 99.8 102 50.0
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 2.2e-19 99.8 75 64.0
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 2.9e-19 99.4 76 63.2
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 2.9e-19 99.4 75 65.3
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 2.9e-19 99.4 75 68.0
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 2.9e-19 99.4 75 64.0
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 2.9e-19 99.4 76 63.2
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 2.9e-19 99.4 76 64.5
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 3.7e-19 99.0 75 62.7
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 3.7e-19 99.0 76 64.5
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 4.9e-19 98.6 75 64.0
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 4.9e-19 98.6 93 52.7
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 4.9e-19 98.6 76 61.8
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 4.9e-19 98.6 75 62.7
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 4.9e-19 98.6 99 53.5
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 4.9e-19 98.6 76 61.8
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 6.4e-19 98.2 100 52.0
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 6.4e-19 98.2 75 64.0
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 8.3e-19 97.8 75 61.3
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 8.3e-19 97.8 75 61.3
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 8.3e-19 97.8 75 61.3
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 8.3e-19 97.8 75 61.3
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 8.3e-19 97.8 76 60.5
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 8.3e-19 97.8 76 61.8
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 1.1e-18 97.4 74 60.8
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 1.1e-18 97.4 77 63.6
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.1e-18 97.4 76 61.8
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.1e-18 97.4 76 61.8
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 1.4e-18 97.1 75 61.3
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 1.4e-18 97.1 80 61.2
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 1.9e-18 96.7 73 63.0
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 1.9e-18 96.7 75 61.3
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 1.9e-18 96.7 75 64.0
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.9e-18 96.7 75 65.3
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 3.2e-18 95.9 76 61.8
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 3.2e-18 95.9 75 62.7
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 3.2e-18 95.9 74 60.8
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 4.1e-18 95.5 75 57.3
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 5.4e-18 95.1 74 60.8
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 5.4e-18 95.1 73 61.6
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 5.4e-18 95.1 73 61.6
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 5.4e-18 95.1 75 64.0
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 5.4e-18 95.1 76 59.2
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 5.4e-18 95.1 76 61.8
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 7.0e-18 94.7 73 61.6
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 7.0e-18 94.7 73 61.6
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 7.0e-18 94.7 73 61.6
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 7.0e-18 94.7 75 64.0
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 7.0e-18 94.7 76 57.9
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 7.0e-18 94.7 76 61.8
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 7.0e-18 94.7 76 61.8
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 9.2e-18 94.4 75 62.7
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 1.2e-17 94.0 74 59.5
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 1.6e-17 93.6 73 60.3
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 1.6e-17 93.6 75 60.0
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 2.1e-17 93.2 73 60.3
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 2.1e-17 93.2 73 60.3
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 2.1e-17 93.2 67 71.6
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 2.7e-17 92.8 76 60.5
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 4.6e-17 92.0 86 59.3
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 4.6e-17 92.0 84 57.1
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 4.6e-17 92.0 65 69.2
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 1.7e-16 90.1 74 58.1
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.7e-16 90.1 75 57.3
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 2.3e-16 89.7 78 60.3
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 3.0e-16 89.4 85 52.9
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 3.0e-16 89.4 57 77.2
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 3.9e-16 89.0 76 55.3
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 8.6e-16 87.8 78 59.0
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 8.6e-16 87.8 75 56.0
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.1e-15 87.4 67 61.2
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 1.1e-15 87.4 75 53.3
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.5e-15 86.3 83 55.4
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 2.5e-15 86.3 83 55.4
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 5.6e-15 85.1 58 70.7
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 5.6e-15 85.1 75 58.7
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 9.5e-15 84.3 86 54.7
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.4e-13 80.5 93 40.9
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 3.1e-13 79.3 57 66.7
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 3.1e-13 79.3 75 49.3
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 3.1e-13 79.3 75 49.3
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 1.5e-12 77.0 75 53.3
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 7.5e-12 74.7 47 68.1
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 7.1e-10 68.2 58 55.2
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 1.0e-08 64.3 46 65.2
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 1.7e-08 63.5 53 54.7
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 5.6e-07 58.5 57 49.1
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 7.3e-07 58.2 50 50.0
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 2.1e-06 56.6 66 50.0
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 6.2e-06 55.1 45 55.6


User provided reference genes

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