Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0361 Ceratophyllum demersum HOM05D002163 ORTHO05D002386 4.6e-121 438.0 230 100.0
CDE11G0556 Ceratophyllum demersum HOM05D002163 ORTHO05D002386 6.1e-57 224.9 134 84.3
Nn4g26155 Nelumbo nucifera HOM05D002163 ORTHO05D002386 6.9e-16 88.6 200 37.0
GSVIVG01017869001 Vitis vinifera HOM05D002163 ORTHO05D002386 2.9e-14 83.2 160 37.5
PSO407G0235 Papaver somniferum HOM05D002163 ORTHO05D002386 5.4e-13 79.0 149 36.2
Duzib151G1139 Durio zibethinus HOM05D002163 ORTHO05D002386 2.7e-12 76.6 151 37.1
Peaxi162Scf00095g00087 Petunia axillaris HOM05D002163 ORTHO05D002386 2.7e-12 76.6 217 32.7
PSO170G6742 Papaver somniferum HOM05D002163 ORTHO05D002386 7.9e-12 75.1 222 32.0
Potri.008G200400 Populus trichocarpa HOM05D002163 ORTHO05D002386 1.3e-11 74.3 180 36.7
CiPaw.02G090500 Carya illinoinensis HOM05D002163 ORTHO05D002386 1.8e-11 73.9 153 37.9
MELO3C021392.2 Cucumis melo HOM05D002163 ORTHO05D002386 1.8e-11 73.9 183 34.4
CSS0016196 Camellia sinensis var. sinensis HOM05D002163 ORTHO05D002386 3.9e-11 72.8 205 33.2
TAR362G0597 Trochodendron aralioides HOM05D002163 ORTHO05D002386 3.9e-11 72.8 250 31.2
THA.LOC104808656 Tarenaya hassleriana HOM05D002163 ORTHO05D002386 5.1e-11 72.4 212 33.0
Nn1g02133 Nelumbo nucifera HOM05D002163 ORTHO05D002386 6.7e-11 72.0 202 35.1
Cfa015556 Carpinus fangiana HOM05D002163 ORTHO05D002386 1.1e-10 71.2 164 36.6
TWI53G0188 Tripterygium wilfordii HOM05D002163 ORTHO05D002386 1.1e-10 71.2 205 35.1
Haze_00985 Corylus avellana HOM05D002163 ORTHO05D002386 2.5e-10 70.1 162 37.0
Nitab4.5_0006569g0040 Nicotiana tabacum HOM05D002163 ORTHO05D002386 2.5e-10 70.1 174 33.9
Actinidia23464 Actinidia chinensis HOM05D002163 ORTHO05D002386 3.3e-10 69.7 183 32.8
CsaV3_6G005450 Cucumis sativus L. HOM05D002163 ORTHO05D002386 3.3e-10 69.7 185 34.6
QL06p005887 Quercus lobata HOM05D002163 ORTHO05D002386 3.3e-10 69.7 169 36.7
Cc03_g02950 Coffea canephora HOM05D002163 ORTHO05D002386 5.6e-10 68.9 183 33.9
Manes.15G021600 Manihot esculenta HOM05D002163 ORTHO05D002386 5.6e-10 68.9 165 37.6
CANSAT78G1916 Cannabis sativa HOM05D002163 ORTHO05D002386 7.4e-10 68.6 111 38.7
ClCG06G005700 Citrullus lanatus HOM05D002163 ORTHO05D002386 9.6e-10 68.2 158 37.3
Oeu037670.3 Olea europaea HOM05D002163 ORTHO05D002386 1.3e-09 67.8 218 31.2
Oeu023654.1 Olea europaea HOM05D002163 ORTHO05D002386 3.7e-09 66.2 156 35.3
MBI17_g29605_MAGBIO Magnolia biondii HOM05D002163 ORTHO05D002386 4.8e-09 65.9 202 32.7
MSTRG.21828 Avicennia marina HOM05D002163 ORTHO05D002386 6.2e-09 65.5 194 34.5
CAN.G522.7 Capsicum annuum HOM05D002163 ORTHO05D002386 6.2e-09 65.5 217 30.0
Sp7g12300 Schrenkiella parvula HOM05D002163 ORTHO05D002386 6.2e-09 65.5 214 28.0
Thecc.04G219300 Theobroma cacao HOM05D002163 ORTHO05D002386 8.1e-09 65.1 202 30.7
TWI73G1105 Tripterygium wilfordii HOM05D002163 ORTHO05D002386 8.1e-09 65.1 172 36.0
CARHR220470 Cardamine hirsuta HOM05D002163 ORTHO05D002386 1.1e-08 64.7 206 27.7
MD13G1180700 Malus domestica HOM05D002163 ORTHO05D002386 1.1e-08 64.7 191 35.1
Manes.03G186500 Manihot esculenta HOM05D002163 ORTHO05D002386 1.1e-08 64.7 277 33.2
Thhalv10024836m.g Eutrema salsugineum HOM05D002163 ORTHO05D002386 1.4e-08 64.3 208 29.3
Os03g0359000 Oryza sativa ssp. japonica HOM05D002163 ORTHO05D002386 1.4e-08 64.3 108 40.7
AL7G42000 Arabidopsis lyrata HOM05D002163 ORTHO05D002386 1.8e-08 63.9 215 28.4
BolC4t25728H Brassica oleracea HOM05D002163 ORTHO05D002386 1.8e-08 63.9 212 26.4
FvH4_4g14200 Fragaria vesca HOM05D002163 ORTHO05D002386 1.8e-08 63.9 204 32.8
BcaC02g09336 Brassica carinata HOM05D002163 ORTHO05D002386 2.4e-08 63.5 212 26.4
Dinv44468 Davidia involucrata HOM05D002163 ORTHO05D002386 2.4e-08 63.5 196 31.6
Glyma.04G137300 Glycine max HOM05D002163 ORTHO05D002386 2.4e-08 63.5 116 37.9
Lj4g0028246 Lotus japonicus HOM05D002163 ORTHO05D002386 2.4e-08 63.5 214 31.3
Lalb_Chr07g0177421 Lupinus albus HOM05D002163 ORTHO05D002386 2.4e-08 63.5 162 34.6
Sc19g0004670 Simmondsia chinensis HOM05D002163 ORTHO05D002386 2.4e-08 63.5 231 31.2
HanXRQChr10g0310201 Helianthus annuus HOM05D002163 ORTHO05D002386 3.1e-08 63.2 209 32.1
Aqoxy2G03228 Aquilegia oxysepala HOM05D002163 ORTHO05D002386 4.0e-08 62.8 212 30.7
Potri.010G029200 Populus trichocarpa HOM05D002163 ORTHO05D002386 4.0e-08 62.8 168 33.9
arahy.Tifrunner.gnm1.ann1.LT40GI Arachis hypogaea HOM05D002163 ORTHO05D002386 5.3e-08 62.4 226 31.4
Migut.N00141 Erythranthe guttata HOM05D002163 ORTHO05D002386 5.3e-08 62.4 237 28.3
Hma1.2p1_0511F.1_g169150 Hydrangea macrophylla HOM05D002163 ORTHO05D002386 5.3e-08 62.4 244 30.3
PGR004G1581 Punica granatum HOM05D002163 ORTHO05D002386 5.3e-08 62.4 209 29.7
Sopen01g032060 Solanum pennellii HOM05D002163 ORTHO05D002386 5.3e-08 62.4 236 27.5
unitig_32.g10791 Utricularia gibba HOM05D002163 ORTHO05D002386 5.3e-08 62.4 218 31.2
Ca_21577_v3 Cicer arietinum L. HOM05D002163 ORTHO05D002386 6.9e-08 62.0 136 36.0
Gohir.D10G150800 Gossypium hirsutum HOM05D002163 ORTHO05D002386 6.9e-08 62.0 158 35.4
Gorai.011G168000 Gossypium raimondii HOM05D002163 ORTHO05D002386 6.9e-08 62.0 158 35.4
Sabra10G0011900 Salix brachista HOM05D002163 ORTHO05D002386 6.9e-08 62.0 152 34.2
Aa31LG8G9990 Aethionema arabicum HOM05D002163 ORTHO05D002386 9.0e-08 61.6 208 30.3
FAN22G0102 Fragaria x ananassa HOM05D002163 ORTHO05D002386 9.0e-08 61.6 186 33.9
C04p41460 Brassica napus HOM05D002163 ORTHO05D002386 1.2e-07 61.2 222 26.1
CARHR099440 Cardamine hirsuta HOM05D002163 ORTHO05D002386 1.2e-07 61.2 197 31.5
Sp3g21200 Schrenkiella parvula HOM05D002163 ORTHO05D002386 1.2e-07 61.2 215 30.7
AT4G14290 Arabidopsis thaliana HOM05D002163 ORTHO05D002386 1.5e-07 60.8 198 26.3
Carub.0007s2802 Capsella rubella HOM05D002163 ORTHO05D002386 2.0e-07 60.5 212 28.8
ECA234G3826 Erigeron canadensis HOM05D002163 ORTHO05D002386 2.0e-07 60.5 203 32.5
Solyc01g080270.3 Solanum lycopersicum HOM05D002163 ORTHO05D002386 2.0e-07 60.5 236 27.5
AT3G23540 Arabidopsis thaliana HOM05D002163 ORTHO05D002386 3.4e-07 59.7 191 30.4
arahy.Tifrunner.gnm1.ann1.V0GQ55 Arachis hypogaea HOM05D002163 ORTHO05D002386 3.4e-07 59.7 205 33.2
Psat4g030600 Pisum sativum HOM05D002163 ORTHO05D002386 3.4e-07 59.7 149 36.2
Carub.0003s2374 Capsella rubella HOM05D002163 ORTHO05D002386 4.5e-07 59.3 206 31.6
BcaC06g35538 Brassica carinata HOM05D002163 ORTHO05D002386 5.8e-07 58.9 220 30.9
C07p13710 Brassica napus HOM05D002163 ORTHO05D002386 5.8e-07 58.9 220 30.9
BolC7t41866H Brassica oleracea HOM05D002163 ORTHO05D002386 5.8e-07 58.9 220 30.9
BraA04t16471Z Brassica rapa HOM05D002163 ORTHO05D002386 7.6e-07 58.5 216 27.3
Medtr4g117570 Medicago truncatula HOM05D002163 ORTHO05D002386 1.0e-06 58.2 222 31.5
A04p07830 Brassica napus HOM05D002163 ORTHO05D002386 1.7e-06 57.4 216 27.8
VMungo1215G0347 Vigna mungo HOM05D002163 ORTHO05D002386 1.7e-06 57.4 178 31.5
Phvul.003G096200 Phaseolus vulgaris HOM05D002163 ORTHO05D002386 2.2e-06 57.0 164 35.4
PGSC0003DMG400004348 Solanum tuberosum HOM05D002163 ORTHO05D002386 2.2e-06 57.0 122 32.8
MSTRG.24761 Avicennia marina HOM05D002163 ORTHO05D002386 2.9e-06 56.6 235 28.5
A07p08850 Brassica napus HOM05D002163 ORTHO05D002386 2.9e-06 56.6 220 30.0
unitig_748.g8354 Utricularia gibba HOM05D002163 ORTHO05D002386 2.9e-06 56.6 188 30.3
Aa31LG9G3080 Aethionema arabicum HOM05D002163 ORTHO05D002386 3.8e-06 56.2 207 27.1
BraA07t28676Z Brassica rapa HOM05D002163 ORTHO05D002386 3.8e-06 56.2 220 30.5
HanXRQChr12g0359451 Helianthus annuus HOM05D002163 ORTHO05D002386 3.8e-06 56.2 200 29.5
BcaB02g08621 Brassica carinata HOM05D002163 ORTHO05D002386 4.9e-06 55.8 224 27.2
FAN12G2278 Fragaria x ananassa HOM05D002163 ORTHO05D002386 4.9e-06 55.8 186 33.9
Zm00001eb017460 Zea mays HOM05D002163 ORTHO05D002386 4.9e-06 55.8 222 30.6
arahy.Tifrunner.gnm1.ann1.6H6MU0 Arachis hypogaea HOM05D002163 ORTHO05D002386 6.4e-06 55.5 210 31.9
EL10As19g24188 Beta vulgaris HOM05D002163 ORTHO05D002386 8.4e-06 55.1 234 28.6
AUR62022512 Chenopodium quinoa HOM05D002163 ORTHO05D002386 8.4e-06 55.1 217 29.0
Ciclev10004606m.g Citrus clementina HOM05D002163 ORTHO05D002386 8.4e-06 55.1 219 30.1
Eucgr.B01162 Eucalyptus grandis HOM05D002163 ORTHO05D002386 8.4e-06 55.1 207 30.4
Glyma.17G019100 Glycine max HOM05D002163 ORTHO05D002386 8.4e-06 55.1 209 31.1
Prupe.1G148800 Prunus persica HOM05D002163 ORTHO05D002386 8.4e-06 55.1 220 30.5


User provided reference genes

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