Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.8e-226 788.9 386 100.0
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 2.4e-154 549.3 360 73.6
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.0e-152 543.9 360 72.8
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.7e-147 526.6 360 70.6
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 3.7e-147 525.4 396 66.9
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 7.7e-145 517.7 357 68.9
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 1.0e-144 517.3 358 68.7
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 5.0e-144 515.0 364 67.3
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 3.6e-142 508.8 366 67.2
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.2e-140 503.8 368 65.8
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.5e-140 503.4 367 66.5
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 3.3e-140 502.3 363 65.8
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 2.2e-139 499.6 378 63.8
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 2.8e-139 499.2 373 65.7
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 8.2e-139 497.7 372 64.5
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.4e-138 496.9 367 64.3
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 1.4e-138 496.9 366 65.6
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.4e-138 496.9 367 65.4
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 3.1e-138 495.7 360 67.2
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.2e-137 493.8 367 65.9
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 2.7e-137 492.7 356 64.6
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 4.5e-137 491.9 367 64.3
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 4.5e-137 491.9 363 65.6
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.5e-137 491.9 367 64.6
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 4.5e-137 491.9 352 66.2
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 5.9e-137 491.5 362 65.2
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.7e-136 490.0 367 64.0
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.2e-136 489.6 366 64.8
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 2.9e-136 489.2 363 64.2
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 3.8e-136 488.8 369 64.2
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 3.8e-136 488.8 369 63.4
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 3.8e-136 488.8 354 65.3
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 5.0e-136 488.4 369 64.5
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 5.0e-136 488.4 348 67.0
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 5.0e-136 488.4 362 65.5
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 8.5e-136 487.6 358 64.8
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 8.5e-136 487.6 363 65.6
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.9e-135 486.5 366 64.2
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 1.9e-135 486.5 362 64.4
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 3.2e-135 485.7 363 63.6
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 4.2e-135 485.3 367 62.9
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 4.2e-135 485.3 369 64.5
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 5.5e-135 485.0 361 66.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 5.5e-135 485.0 356 63.2
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 5.5e-135 485.0 363 63.1
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 9.4e-135 484.2 364 63.2
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 9.4e-135 484.2 357 65.8
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 1.2e-134 483.8 367 62.7
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 2.1e-134 483.0 357 63.0
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 2.1e-134 483.0 363 63.9
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 2.7e-134 482.6 366 63.9
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 6.1e-134 481.5 366 63.9
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 6.1e-134 481.5 363 63.6
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 8.0e-134 481.1 367 62.9
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.0e-133 480.7 370 61.6
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.4e-133 480.3 370 64.1
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.4e-133 480.3 370 64.1
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.3e-133 479.6 379 61.7
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.0e-133 478.8 380 62.9
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 4.0e-133 478.8 357 64.7
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 5.2e-133 478.4 363 62.3
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 6.8e-133 478.0 373 62.7
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 1.2e-132 477.2 313 70.6
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.5e-132 476.9 359 63.8
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 2.0e-132 476.5 357 63.9
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.6e-132 476.1 366 63.7
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 9.8e-132 474.2 356 62.9
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 9.8e-132 474.2 356 64.0
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.7e-131 473.4 357 63.3
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.8e-131 472.6 368 61.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.4e-130 470.3 365 60.8
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.4e-130 469.5 388 62.1
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 2.7e-129 466.1 363 62.3
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.3e-128 463.8 374 60.2
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.7e-128 463.4 407 55.5
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 2.9e-128 462.6 362 62.4
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 6.5e-128 461.5 366 61.2
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.9e-127 459.9 364 61.0
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.5e-127 459.5 351 63.0
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 9.5e-127 457.6 364 60.4
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.2e-126 457.2 364 60.7
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 3.6e-126 455.7 364 60.4
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 3.6e-126 455.7 364 60.7
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 6.1e-126 454.9 364 60.4
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 8.0e-126 454.5 365 60.5
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.0e-125 454.1 364 60.4
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 5.2e-125 451.8 364 62.6
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 8.9e-125 451.1 364 59.3
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.5e-124 450.3 377 58.9
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.5e-124 450.3 321 66.4
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.2e-123 446.4 358 59.8
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 3.1e-122 442.6 341 63.0
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 3.1e-122 442.6 341 63.0
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.0e-120 437.6 325 64.0
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.5e-119 433.7 384 56.2
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 8.0e-118 427.9 318 64.5
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 1.5e-116 423.7 427 51.8
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.0e-116 423.3 318 63.8
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 3.5e-113 412.5 347 57.6
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 6.6e-112 408.3 310 63.2
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 7.0e-106 388.3 379 51.7
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 7.3e-103 378.3 245 78.4
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 6.8e-101 371.7 233 75.5
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.3e-99 367.5 301 58.1
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 2.4e-98 363.2 295 57.3
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.2e-97 360.9 292 59.9
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.5e-95 354.0 355 52.4
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.5e-92 344.0 287 59.6
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.0e-92 343.6 358 50.8
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.3e-91 340.9 231 69.7
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 7.1e-82 308.5 324 51.9
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 7.3e-79 298.5 318 50.6
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 9.6e-79 298.1 358 45.5
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.8e-77 293.9 243 57.2
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 3.1e-77 293.1 286 53.8
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 9.0e-77 291.6 262 54.6
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.6e-76 290.0 321 48.6
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 5.3e-69 265.8 173 72.8
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 7.9e-65 251.9 155 76.1
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 1.4e-58 231.1 162 63.0
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 9.0e-53 211.8 167 61.7
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.8e-46 189.5 144 63.9
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.3e-32 144.1 282 32.6
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.1e-25 120.9 62 95.2
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.7e-25 120.6 70 82.9
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 6.1e-25 119.4 114 49.1
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 3.3e-23 113.6 87 66.7
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 4.4e-23 113.2 120 45.8
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 3.5e-12 77.0 147 34.7
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 8.0e-09 65.9 44 61.4


User provided reference genes

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