Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0219 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 0.0e+00 1134.4 558 100.0
TAR633G2052 Trochodendron aralioides HOM05D003384 ORTHO05D005024 9.1e-248 860.1 536 75.7
Glyma.18G036300 Glycine max HOM05D003384 ORTHO05D005024 2.7e-247 858.6 536 76.5
Lj2g0004466 Lotus japonicus HOM05D003384 ORTHO05D005024 3.5e-247 858.2 536 76.5
MBI14_g11677_MAGBIO Magnolia biondii HOM05D003384 ORTHO05D005024 1.0e-246 856.7 536 76.1
Lj6g0002532 Lotus japonicus HOM05D003384 ORTHO05D005024 2.9e-246 855.1 536 75.9
Lj1C941G12 Lonicera japonica HOM05D003384 ORTHO05D005024 6.6e-246 854.0 535 76.8
Potri.010G200200 Populus trichocarpa HOM05D003384 ORTHO05D005024 1.1e-245 853.2 535 75.3
Sc09g0005970 Simmondsia chinensis HOM05D003384 ORTHO05D005024 1.9e-245 852.4 536 74.8
Peaxi162Scf00668g00439 Petunia axillaris HOM05D003384 ORTHO05D005024 2.5e-245 852.0 536 75.2
Nitab4.5_0001169g0010 Nicotiana tabacum HOM05D003384 ORTHO05D005024 4.2e-245 851.3 536 74.8
Glyma.11G221100 Glycine max HOM05D003384 ORTHO05D005024 7.2e-245 850.5 536 75.7
Nitab4.5_0000333g0100 Nicotiana tabacum HOM05D003384 ORTHO05D005024 7.2e-245 850.5 536 74.6
Eucgr.I00206 Eucalyptus grandis HOM05D003384 ORTHO05D005024 1.2e-244 849.7 536 75.2
VMungo1309G0201 Vigna mungo HOM05D003384 ORTHO05D005024 1.6e-244 849.4 536 74.8
COL.COLO4_27063 Corchorus olitorius HOM05D003384 ORTHO05D005024 2.1e-244 849.0 536 75.7
DCAR_011724 Daucus carota HOM05D003384 ORTHO05D005024 2.1e-244 849.0 536 75.4
Solyc02g076720.3 Solanum lycopersicum HOM05D003384 ORTHO05D005024 2.8e-244 848.6 536 74.3
Aqoxy5G02953 Aquilegia oxysepala HOM05D003384 ORTHO05D005024 3.6e-244 848.2 535 76.1
CAN.G370.86 Capsicum annuum HOM05D003384 ORTHO05D005024 3.6e-244 848.2 537 73.6
CiPaw.01G290900 Carya illinoinensis HOM05D003384 ORTHO05D005024 3.6e-244 848.2 536 75.2
Dinv42277 Davidia involucrata HOM05D003384 ORTHO05D005024 3.6e-244 848.2 536 75.4
PGSC0003DMG400010235 Solanum tuberosum HOM05D003384 ORTHO05D005024 3.6e-244 848.2 536 74.3
Thecc.05G055600 Theobroma cacao HOM05D003384 ORTHO05D005024 4.7e-244 847.8 536 75.9
Ca_17447_v3 Cicer arietinum L. HOM05D003384 ORTHO05D005024 6.1e-244 847.4 536 75.4
Ca_30022_v3 Cicer arietinum L. HOM05D003384 ORTHO05D005024 6.1e-244 847.4 536 75.4
SalBow6G5425 Salvia bowleyana HOM05D003384 ORTHO05D005024 6.1e-244 847.4 538 74.2
arahy.Tifrunner.gnm1.ann1.Z31J18 Arachis hypogaea HOM05D003384 ORTHO05D005024 1.0e-243 846.7 536 75.4
QL08p061129 Quercus lobata HOM05D003384 ORTHO05D005024 1.0e-243 846.7 536 74.4
Rhsim08G0242600 Rhododendron simsii HOM05D003384 ORTHO05D005024 1.4e-243 846.3 536 74.4
Sopen02g021650 Solanum pennellii HOM05D003384 ORTHO05D005024 1.8e-243 845.9 536 74.1
CSS0027778 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 2.3e-243 845.5 536 74.8
Sabra10G0154400 Salix brachista HOM05D003384 ORTHO05D005024 2.3e-243 845.5 532 74.8
Gorai.009G419700 Gossypium raimondii HOM05D003384 ORTHO05D005024 3.0e-243 845.1 536 75.4
PSO782G4051 Papaver somniferum HOM05D003384 ORTHO05D005024 3.0e-243 845.1 536 74.4
PSO837G0041 Papaver somniferum HOM05D003384 ORTHO05D005024 3.0e-243 845.1 536 74.4
Phvul.009G004700 Phaseolus vulgaris HOM05D003384 ORTHO05D005024 4.0e-243 844.7 536 74.6
MD03G1203100 Malus domestica HOM05D003384 ORTHO05D005024 6.8e-243 844.0 536 74.4
Actinidia02926 Actinidia chinensis HOM05D003384 ORTHO05D005024 8.9e-243 843.6 536 75.2
CSS0047277 Camellia sinensis var. sinensis HOM05D003384 ORTHO05D005024 8.9e-243 843.6 536 74.8
Aqoxy1G00556 Aquilegia oxysepala HOM05D003384 ORTHO05D005024 1.2e-242 843.2 535 75.7
Ciclev10030516m.g Citrus clementina HOM05D003384 ORTHO05D005024 1.2e-242 843.2 536 74.1
PSO478G4441 Papaver somniferum HOM05D003384 ORTHO05D005024 1.2e-242 843.2 536 73.9
HPP92_005602 Vanilla planifolia HOM05D003384 ORTHO05D005024 1.2e-242 843.2 536 74.8
MD04G1022300 Malus domestica HOM05D003384 ORTHO05D005024 2.0e-242 842.4 536 74.6
Medtr6g011360 Medicago truncatula HOM05D003384 ORTHO05D005024 2.0e-242 842.4 536 74.8
Duzib093G0913 Durio zibethinus HOM05D003384 ORTHO05D005024 2.6e-242 842.0 536 75.6
Gohir.D04G115100 Gossypium hirsutum HOM05D003384 ORTHO05D005024 2.6e-242 842.0 535 75.0
Medtr8g100045 Medicago truncatula HOM05D003384 ORTHO05D005024 2.6e-242 842.0 536 74.8
FAN08G1276 Fragaria x ananassa HOM05D003384 ORTHO05D005024 4.4e-242 841.3 536 74.8
PGR004G0663 Punica granatum HOM05D003384 ORTHO05D005024 5.7e-242 840.9 537 75.4
Cfa001433 Carpinus fangiana HOM05D003384 ORTHO05D005024 7.5e-242 840.5 536 74.4
FAN13G0754 Fragaria x ananassa HOM05D003384 ORTHO05D005024 1.3e-241 839.7 536 74.6
Gohir.A04G076000 Gossypium hirsutum HOM05D003384 ORTHO05D005024 1.3e-241 839.7 536 74.8
Os05g0104650 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 1.7e-241 839.3 536 74.4
Prupe.8G024000 Prunus persica HOM05D003384 ORTHO05D005024 1.7e-241 839.3 536 74.1
RcHm_v2.0_Chr7g0204141 Rosa chinensis HOM05D003384 ORTHO05D005024 1.7e-241 839.3 536 74.8
Phvul.001G234500 Phaseolus vulgaris HOM05D003384 ORTHO05D005024 2.8e-241 838.6 536 74.1
Lalb_Chr15g0084621 Lupinus albus HOM05D003384 ORTHO05D005024 4.9e-241 837.8 536 74.1
Rhsim10G0184100 Rhododendron simsii HOM05D003384 ORTHO05D005024 4.9e-241 837.8 536 73.9
Haze_17110 Corylus avellana HOM05D003384 ORTHO05D005024 6.3e-241 837.4 536 74.4
Manes.10G027300 Manihot esculenta HOM05D003384 ORTHO05D005024 6.3e-241 837.4 535 74.2
Psat7g023040 Pisum sativum HOM05D003384 ORTHO05D005024 8.3e-241 837.0 536 74.1
FvH4_5g19530 Fragaria vesca HOM05D003384 ORTHO05D005024 1.4e-240 836.3 536 74.3
CsaV3_5G010490 Cucumis sativus L. HOM05D003384 ORTHO05D005024 1.8e-240 835.9 536 73.7
Lalb_Chr18g0053121 Lupinus albus HOM05D003384 ORTHO05D005024 1.8e-240 835.9 536 73.5
Os01g0888500 Oryza sativa ssp. japonica HOM05D003384 ORTHO05D005024 1.8e-240 835.9 536 74.3
TWI18G1054 Tripterygium wilfordii HOM05D003384 ORTHO05D005024 1.8e-240 835.9 536 72.9
FAN18G2272 Fragaria x ananassa HOM05D003384 ORTHO05D005024 2.4e-240 835.5 536 74.3
FAN18G2911 Fragaria x ananassa HOM05D003384 ORTHO05D005024 2.4e-240 835.5 536 74.3
FAN04G2139 Fragaria x ananassa HOM05D003384 ORTHO05D005024 4.1e-240 834.7 536 74.3
MELO3C018382.2 Cucumis melo HOM05D003384 ORTHO05D005024 5.4e-240 834.3 536 73.5
Prupe.1G542100 Prunus persica HOM05D003384 ORTHO05D005024 5.4e-240 834.3 536 74.3
TPR.G25489 Trifolium pratense HOM05D003384 ORTHO05D005024 7.0e-240 833.9 536 74.3
Oeu001502.2 Olea europaea HOM05D003384 ORTHO05D005024 1.2e-239 833.2 537 73.2
SGA_v2.0_scaffold2G01034 Striga asiatica HOM05D003384 ORTHO05D005024 1.2e-239 833.2 536 73.9
Cfa014646 Carpinus fangiana HOM05D003384 ORTHO05D005024 2.7e-239 832.0 536 74.1
Migut.F00756 Erythranthe guttata HOM05D003384 ORTHO05D005024 4.5e-239 831.2 537 72.6
Lj8C80T4 Lonicera japonica HOM05D003384 ORTHO05D005024 1.3e-238 829.7 535 74.0
Sed0002627 Sechium edule HOM05D003384 ORTHO05D005024 1.3e-238 829.7 536 72.4
VMungo1383G2986 Vigna mungo HOM05D003384 ORTHO05D005024 1.3e-238 829.7 536 73.5
HanXRQChr05g0161141 Helianthus annuus HOM05D003384 ORTHO05D005024 2.3e-238 828.9 536 73.1
SalBow6G5500 Salvia bowleyana HOM05D003384 ORTHO05D005024 3.9e-238 828.2 537 72.8
ClCG07G004540 Citrullus lanatus HOM05D003384 ORTHO05D005024 8.6e-238 827.0 536 72.9
Zm00001eb055170 Zea mays HOM05D003384 ORTHO05D005024 8.6e-238 827.0 536 73.3
Zm00001eb067720 Zea mays HOM05D003384 ORTHO05D005024 1.5e-237 826.2 536 73.9
Cc04_g11240 Coffea canephora HOM05D003384 ORTHO05D005024 2.5e-237 825.5 536 73.5
HanXRQChr08g0232581 Helianthus annuus HOM05D003384 ORTHO05D005024 3.3e-237 825.1 536 72.9
Gohir.A06G008900 Gossypium hirsutum HOM05D003384 ORTHO05D005024 5.6e-237 824.3 536 73.5
PGSC0003DMG400025849 Solanum tuberosum HOM05D003384 ORTHO05D005024 5.6e-237 824.3 536 72.6
ECA246G5320 Erigeron canadensis HOM05D003384 ORTHO05D005024 6.1e-236 820.8 536 72.9
THA.LOC104816583 Tarenaya hassleriana HOM05D003384 ORTHO05D005024 2.3e-235 818.9 536 71.3
EL10Ac2g04005 Beta vulgaris HOM05D003384 ORTHO05D005024 6.8e-235 817.4 536 72.4
AT1G74260 Arabidopsis thaliana HOM05D003384 ORTHO05D005024 2.0e-234 815.8 536 73.1
Thhalv10018011m.g Eutrema salsugineum HOM05D003384 ORTHO05D005024 1.7e-233 812.8 535 72.3
Sp5g29440 Schrenkiella parvula HOM05D003384 ORTHO05D005024 2.2e-233 812.4 536 73.1
CARHR067520 Cardamine hirsuta HOM05D003384 ORTHO05D005024 2.9e-233 812.0 536 72.6
Ah.03g145450 Amaranthus hybridus HOM05D003384 ORTHO05D005024 3.7e-233 811.6 536 71.5
AL2G34140 Arabidopsis lyrata HOM05D003384 ORTHO05D005024 3.7e-233 811.6 536 72.2
A07p29480 Brassica napus HOM05D003384 ORTHO05D005024 3.7e-233 811.6 539 72.0
BraA07t31553Z Brassica rapa HOM05D003384 ORTHO05D005024 1.9e-232 809.3 538 71.9
BraA07t30586Z Brassica rapa HOM05D003384 ORTHO05D005024 2.4e-232 808.9 539 71.6
Carub.0002s2105 Capsella rubella HOM05D003384 ORTHO05D005024 4.1e-232 808.1 536 72.4
BolC6t39873H Brassica oleracea HOM05D003384 ORTHO05D005024 9.2e-232 807.0 538 71.9
C06p48450 Brassica napus HOM05D003384 ORTHO05D005024 1.2e-231 806.6 538 71.9
BcaC08g46858 Brassica carinata HOM05D003384 ORTHO05D005024 2.0e-231 805.8 538 71.7
C06p33470 Brassica napus HOM05D003384 ORTHO05D005024 2.0e-231 805.8 539 71.2
BolC6t38461H Brassica oleracea HOM05D003384 ORTHO05D005024 2.0e-231 805.8 539 71.2
AUR62002272 Chenopodium quinoa HOM05D003384 ORTHO05D005024 4.6e-231 804.7 536 72.0
ATR0580G036 Amborella trichopoda HOM05D003384 ORTHO05D005024 1.0e-230 803.5 540 71.5
ClCG07G004570 Citrullus lanatus HOM05D003384 ORTHO05D005024 1.0e-230 803.5 536 70.5
Hund07041 Selenicereus undatus HOM05D003384 ORTHO05D005024 1.0e-230 803.5 536 70.7
A07p40090 Brassica napus HOM05D003384 ORTHO05D005024 5.0e-230 801.2 536 71.6
Lsat_1_v5_gn_6_96581 Lactuca sativa HOM05D003384 ORTHO05D005024 6.6e-230 800.8 536 71.8
SEGI_27631 Sequoiadendron giganteum HOM05D003384 ORTHO05D005024 6.6e-230 800.8 535 70.3
CAN.G606.41 Capsicum annuum HOM05D003384 ORTHO05D005024 1.4e-227 793.1 536 70.9
CDE05G1365 Ceratophyllum demersum HOM05D003384 ORTHO05D005024 8.6e-222 773.9 536 74.6
Pp3c6_8600 Physcomitrium patens HOM05D003384 ORTHO05D005024 6.2e-220 767.7 541 66.7
AUR62034627 Chenopodium quinoa HOM05D003384 ORTHO05D005024 6.8e-219 764.2 536 69.0
vmacro20478 Vaccinium macrocarpon HOM05D003384 ORTHO05D005024 1.2e-218 763.5 532 69.9
Mapoly0047s0031 Marchantia polymorpha HOM05D003384 ORTHO05D005024 1.3e-217 760.0 546 67.2
SHI22710 Sapria himalayana HOM05D003384 ORTHO05D005024 1.3e-217 760.0 536 67.0
TPR.G18022 Trifolium pratense HOM05D003384 ORTHO05D005024 3.7e-217 758.4 536 69.0
Cc07_g16480 Coffea canephora HOM05D003384 ORTHO05D005024 1.1e-213 746.9 494 73.3
Aa31LG7G13860 Aethionema arabicum HOM05D003384 ORTHO05D005024 1.4e-211 740.0 488 71.9
unitig_0.g1015 Utricularia gibba HOM05D003384 ORTHO05D005024 4.9e-209 731.5 496 68.1
CBR_g19873 Chara braunii HOM05D003384 ORTHO05D005024 1.9e-208 729.6 540 65.9
SMO358G0063 Selaginella moellendorffii HOM05D003384 ORTHO05D005024 1.9e-208 729.6 537 66.1
Dinv10579 Davidia involucrata HOM05D003384 ORTHO05D005024 1.1e-205 720.3 469 74.4
BcaC08g45597 Brassica carinata HOM05D003384 ORTHO05D005024 8.1e-204 714.1 534 66.7
Hma1.2p1_0998F.1_g246010 Hydrangea macrophylla HOM05D003384 ORTHO05D005024 1.2e-202 710.3 536 65.9
Solyc01g107270.4 Solanum lycopersicum HOM05D003384 ORTHO05D005024 5.1e-198 694.9 536 64.2
Peaxi162Scf00685g00122 Petunia axillaris HOM05D003384 ORTHO05D005024 5.8e-186 654.8 426 75.4
AUR62009268 Chenopodium quinoa HOM05D003384 ORTHO05D005024 5.5e-184 648.3 434 68.7
SEGI_36858 Sequoiadendron giganteum HOM05D003384 ORTHO05D005024 9.6e-181 637.5 431 67.5
Cre08.g364800 Chlamydomonas reinhardtii HOM05D003384 ORTHO05D005024 1.6e-180 636.7 542 57.0
AUR62042439 Chenopodium quinoa HOM05D003384 ORTHO05D005024 4.0e-179 632.1 536 60.6
TAR629G0479 Trochodendron aralioides HOM05D003384 ORTHO05D005024 2.6e-178 629.4 410 75.9
MCO14G233 Micromonas commoda HOM05D003384 ORTHO05D005024 3.4e-170 602.4 544 55.0
Medtr3g085010 Medicago truncatula HOM05D003384 ORTHO05D005024 6.5e-169 598.2 540 57.6
PRCOL_00000695 Prasinoderma coloniale HOM05D003384 ORTHO05D005024 6.9e-163 578.2 560 52.7
Sopen01g049520 Solanum pennellii HOM05D003384 ORTHO05D005024 2.6e-162 576.2 504 59.1
AagrBONN_evm.TU.Sc2ySwM_344.2607 Anthoceros agrestis HOM05D003384 ORTHO05D005024 1.5e-152 543.9 415 65.1
GSVIVG01016499001 Vitis vinifera HOM05D003384 ORTHO05D005024 4.7e-143 512.3 355 71.5
Cpa.g.c38225 Carica papaya HOM05D003384 ORTHO05D005024 2.3e-126 456.8 339 63.4
Cfa023973 Carpinus fangiana HOM05D003384 ORTHO05D005024 1.5e-93 347.8 579 35.9
Haze_26202 Corylus avellana HOM05D003384 ORTHO05D005024 1.3e-89 334.7 646 34.7
SalBow1G4952 Salvia bowleyana HOM05D003384 ORTHO05D005024 4.5e-77 293.1 346 48.3
BcaB05g24847 Brassica carinata HOM05D003384 ORTHO05D005024 4.0e-70 270.0 193 67.4
Potri.008G058600 Populus trichocarpa HOM05D003384 ORTHO05D005024 4.9e-68 263.1 186 70.4
SalBow2G3548 Salvia bowleyana HOM05D003384 ORTHO05D005024 1.2e-61 241.9 142 73.2
Sc09g0006010 Simmondsia chinensis HOM05D003384 ORTHO05D005024 1.5e-56 224.9 131 73.3
TAR629G1400 Trochodendron aralioides HOM05D003384 ORTHO05D005024 5.1e-41 173.3 91 79.1
AUR62009267 Chenopodium quinoa HOM05D003384 ORTHO05D005024 5.0e-36 156.8 101 83.2
MD07G1195900 Malus domestica HOM05D003384 ORTHO05D005024 3.1e-22 110.9 133 50.4
RcHm_v2.0_Chr7g0229191 Rosa chinensis HOM05D003384 ORTHO05D345115 3.2e-19 100.9 95 57.9
SMO199G0120 Selaginella moellendorffii HOM05D003384 ORTHO05D376227 3.2e-19 100.9 141 46.8
Sabra08G0043100 Salix brachista HOM05D001467 ORTHO05D001447 6.1e-18 96.7 75 68.0
CAN.G426.19 Capsicum annuum HOM05D000212 ORTHO05D005509 5.2e-17 93.6 82 50.0
Oeu031352.2 Olea europaea HOM05D003384 ORTHO05D005024 3.4e-16 90.9 52 69.2
Actinidia19536 Actinidia chinensis HOM05D003384 ORTHO05D053833 2.2e-15 88.2 90 55.6
SMO077G0006 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.8e-15 87.8 158 40.5
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 1.1e-14 85.9 72 62.5
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 1.8e-14 85.1 72 61.1
SMO353G0102 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 5.9e-13 80.1 94 52.1
SMO009G0025 Selaginella moellendorffii HOM05D003384 ORTHO05D378488 3.8e-12 77.4 189 37.6
Medtr5g080480 Medicago truncatula HOM05D003384 ORTHO05D264199 2.5e-11 74.7 54 64.8
SMO011G0040 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.8e-10 71.2 54 66.7
SMO116G0212 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.8e-10 71.2 85 50.6
SMO347G0175 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.8e-10 71.2 54 66.7
MD10G1018700 Malus domestica HOM05D003384 ORTHO05D005024 3.6e-10 70.9 96 36.5
SMO032G0004 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 1.4e-09 68.9 54 64.8
SMO341G0001 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 4.0e-09 67.4 55 63.6
BcaC03g15493 Brassica carinata HOM05D002057 ORTHO05D002231 2.0e-08 65.1 87 41.4
SMO364G0055 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 2.0e-08 65.1 79 46.8
SMO286G0018 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 7.5e-08 63.2 46 69.6
SMO360G0013 Selaginella moellendorffii HOM05D003384 ORTHO05D377588 7.5e-08 63.2 106 43.4
SMO036G0002 Selaginella moellendorffii HOM05D003384 ORTHO05D374652 1.7e-07 62.0 138 37.0
SMO112G0025 Selaginella moellendorffii HOM05D003384 ORTHO05D378420 1.7e-07 62.0 138 37.0
A02p19230 Brassica napus HOM05D003384 ORTHO05D032993 6.4e-07 60.1 36 66.7
C02p31820 Brassica napus HOM05D003384 ORTHO05D032993 6.4e-07 60.1 36 66.7
BolC2t09209H Brassica oleracea HOM05D003384 ORTHO05D032993 8.3e-07 59.7 35 68.6
SMO353G0290 Selaginella moellendorffii HOM05D003384 ORTHO05D018108 1.4e-06 58.9 95 43.2
SMO162G0012 Selaginella moellendorffii HOM05D003384 ORTHO05D375018 5.4e-06 57.0 77 48.1
DCAR_007785 Daucus carota HOM05D032355 ORTHO05D004109 9.2e-06 56.2 95 36.8


User provided reference genes

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