Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0143 Ceratophyllum demersum HOM05D004629 ORTHO05D019743 1.3e-114 416.4 207 100.0
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 3.0e-87 325.5 231 72.3
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 5.1e-87 324.7 231 72.7
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 1.5e-86 323.2 231 71.9
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 2.5e-86 322.4 231 71.4
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 2.5e-86 322.4 231 70.6
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 4.3e-86 321.6 231 71.4
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 4.3e-86 321.6 231 71.0
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 5.7e-86 321.2 231 71.4
AUR62019209 Chenopodium quinoa HOM05D004629 ORTHO05D006604 7.4e-86 320.9 231 71.9
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 7.4e-86 320.9 231 71.4
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 7.4e-86 320.9 231 71.0
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 1.7e-85 319.7 231 70.6
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 1.7e-85 319.7 231 70.1
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 2.2e-85 319.3 231 70.6
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 2.2e-85 319.3 231 71.4
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 2.2e-85 319.3 231 70.1
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 4.8e-85 318.2 231 70.1
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.1e-84 317.0 231 71.4
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.1e-84 317.0 231 69.7
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 1.4e-84 316.6 231 70.6
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 1.4e-84 316.6 231 70.1
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 1.4e-84 316.6 230 70.4
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 2.4e-84 315.8 231 70.1
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 2.4e-84 315.8 231 70.1
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 2.4e-84 315.8 231 71.0
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 2.4e-84 315.8 231 70.6
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 2.4e-84 315.8 231 70.1
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 3.1e-84 315.5 231 70.1
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 3.1e-84 315.5 231 70.6
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 4.1e-84 315.1 231 70.1
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 4.1e-84 315.1 231 69.7
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 4.1e-84 315.1 231 70.1
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 5.3e-84 314.7 231 69.7
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 5.3e-84 314.7 231 70.6
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 5.3e-84 314.7 231 70.6
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 5.3e-84 314.7 231 69.3
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 5.3e-84 314.7 231 69.7
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 6.9e-84 314.3 231 69.7
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 6.9e-84 314.3 231 70.6
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 9.1e-84 313.9 231 69.7
Lj2A677T24 Lonicera japonica HOM05D004629 ORTHO05D006604 9.1e-84 313.9 231 69.7
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 9.1e-84 313.9 231 70.6
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 9.1e-84 313.9 231 69.7
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 9.1e-84 313.9 231 69.7
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 9.1e-84 313.9 231 70.1
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 1.2e-83 313.5 231 71.0
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 1.2e-83 313.5 231 69.7
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 1.5e-83 313.2 230 69.1
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 1.5e-83 313.2 231 69.7
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 2.0e-83 312.8 225 71.6
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 2.6e-83 312.4 231 70.1
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 4.5e-83 311.6 231 70.1
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 5.9e-83 311.2 231 69.7
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 5.9e-83 311.2 231 68.8
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 5.9e-83 311.2 231 69.3
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 7.7e-83 310.8 231 68.8
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 7.7e-83 310.8 231 68.4
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 7.7e-83 310.8 231 68.8
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 7.7e-83 310.8 231 68.0
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 1.0e-82 310.5 231 68.4
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 1.0e-82 310.5 231 68.8
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 1.0e-82 310.5 231 68.8
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 1.0e-82 310.5 231 68.8
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.0e-82 310.5 231 68.8
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 1.0e-82 310.5 231 68.8
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 1.3e-82 310.1 231 68.4
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 1.3e-82 310.1 231 68.4
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 1.3e-82 310.1 231 68.4
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 1.3e-82 310.1 231 68.4
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 1.7e-82 309.7 225 70.2
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 1.7e-82 309.7 231 69.3
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 1.7e-82 309.7 231 68.8
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 2.9e-82 308.9 231 68.0
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 3.8e-82 308.5 231 68.4
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 3.8e-82 308.5 231 68.0
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 3.8e-82 308.5 231 68.0
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 3.8e-82 308.5 231 68.0
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 6.5e-82 307.8 231 68.0
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 6.5e-82 307.8 231 66.7
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 6.5e-82 307.8 231 68.4
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 8.5e-82 307.4 231 68.8
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 1.1e-81 307.0 231 67.1
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 1.1e-81 307.0 231 67.5
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 1.1e-81 307.0 231 67.5
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 1.1e-81 307.0 258 64.3
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.1e-81 307.0 231 68.4
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 1.1e-81 307.0 241 66.4
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 1.4e-81 306.6 231 67.5
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 1.4e-81 306.6 231 67.5
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 1.9e-81 306.2 231 66.2
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 3.2e-81 305.4 231 68.8
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 5.5e-81 304.7 231 67.1
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 5.5e-81 304.7 227 69.6
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 5.5e-81 304.7 231 68.0
CDE05G1726 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 2.7e-80 302.4 203 78.3
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 6.1e-80 301.2 225 68.9
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 1.0e-79 300.4 225 67.6
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 1.0e-79 300.4 231 67.5
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 1.1e-78 297.0 231 66.7
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 1.1e-78 297.0 231 66.2
unitig_22.g5473 Utricularia gibba HOM05D004629 ORTHO05D006604 1.1e-78 297.0 227 68.3
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.5e-78 296.6 231 68.4
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 4.4e-78 295.0 231 66.2
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 4.4e-78 295.0 225 67.6
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 4.4e-78 295.0 231 64.9
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 3.7e-77 292.0 225 66.2
CDE05G1958 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 1.8e-76 289.7 234 70.1
CDE05G3086 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 9.1e-76 287.3 213 74.2
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 3.8e-74 282.0 231 60.2
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 1.9e-73 279.6 231 61.9
SMO364G0493 Selaginella moellendorffii HOM05D004629 ORTHO05D006604 4.7e-72 275.0 231 61.9
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 1.0e-71 273.9 231 62.3
vmacro16237 Vaccinium macrocarpon HOM05D004629 ORTHO05D006604 7.0e-68 261.2 208 65.9
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 3.2e-65 252.3 232 58.6
Cfa009637 Carpinus fangiana HOM05D004629 ORTHO05D006604 5.5e-65 251.5 206 64.6
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 9.7e-62 240.7 240 54.2
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 1.4e-60 236.9 231 57.1
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 3.1e-60 235.7 231 56.3
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 1.2e-54 217.2 234 52.6
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 6.8e-47 191.4 138 73.2
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 2.8e-45 186.0 231 43.7
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 3.6e-40 169.1 141 63.8
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 6.4e-37 158.3 93 80.6
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 8.6e-34 147.9 95 74.7
Nn7g35985 Nelumbo nucifera HOM05D004629 ORTHO05D019743 1.9e-33 146.7 76 88.2
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 1.5e-30 137.1 205 38.5
PRCOL_00001239 Prasinoderma coloniale HOM05D004629 ORTHO05D006604 7.0e-28 128.3 235 35.7
AT2G12280 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 2.3e-26 123.2 75 76.0
Psat4g081640 Pisum sativum HOM05D004629 ORTHO05D019743 5.4e-20 102.1 92 57.6
Psat4g081680 Pisum sativum HOM05D004629 ORTHO05D019743 5.4e-20 102.1 149 41.6
Psat2g086560 Pisum sativum HOM05D004629 ORTHO05D002382 1.8e-15 87.0 56 73.2
Psat4g161960 Pisum sativum HOM05D001026 ORTHO05D007776 2.4e-15 86.7 167 36.5
AT2G12200 Arabidopsis thaliana HOM05D004629 ORTHO05D019743 2.1e-11 73.6 61 59.0
ECA248G2032 Erigeron canadensis HOM05D004629 ORTHO05D189049 9.6e-09 64.7 43 67.4
Haze_27099 Corylus avellana HOM05D004629 ORTHO05D006604 3.1e-07 59.7 80 37.5


User provided reference genes

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