Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.6e-115 418.7 205 100.0
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.5e-102 376.3 245 78.4
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 6.4e-74 281.2 196 68.9
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.4e-68 263.5 235 56.2
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 3.8e-66 255.4 240 54.2
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 9.3e-65 250.8 238 53.4
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 2.1e-64 249.6 235 52.8
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 1.9e-62 243.0 243 50.2
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.3e-61 240.4 238 51.3
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 4.8e-61 238.4 240 48.8
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 8.2e-61 237.7 235 50.6
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.4e-60 236.9 234 50.9
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 2.4e-60 236.1 231 50.2
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 3.1e-60 235.7 230 51.3
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 5.3e-60 235.0 232 52.2
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 9.0e-60 234.2 236 50.0
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 1.2e-59 233.8 231 49.8
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 1.5e-59 233.4 240 47.9
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 1.5e-59 233.4 235 50.2
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 4.5e-59 231.9 238 49.2
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.5e-59 231.9 235 48.9
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 5.9e-59 231.5 231 50.2
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 5.9e-59 231.5 231 49.8
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 5.9e-59 231.5 231 49.8
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 7.6e-59 231.1 238 47.9
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.0e-58 230.7 240 49.6
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.0e-58 230.7 240 47.9
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.3e-58 230.3 235 48.5
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 1.3e-58 230.3 235 48.5
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 1.7e-58 229.9 230 49.1
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.7e-58 229.9 261 46.4
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 2.2e-58 229.6 237 49.8
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 2.9e-58 229.2 235 47.2
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 2.9e-58 229.2 235 48.9
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 3.8e-58 228.8 231 50.6
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 3.8e-58 228.8 234 49.6
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 5.0e-58 228.4 230 48.7
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 2.5e-57 226.1 244 48.4
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 3.2e-57 225.7 235 48.9
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 5.5e-57 224.9 240 45.8
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 7.2e-57 224.6 235 47.7
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 9.3e-57 224.2 243 48.1
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.2e-56 223.8 236 47.0
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.2e-56 223.8 222 47.7
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.6e-56 223.4 237 46.8
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 1.6e-56 223.4 240 47.1
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 2.1e-56 223.0 231 49.8
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 2.7e-56 222.6 235 47.7
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 2.7e-56 222.6 231 49.8
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 2.7e-56 222.6 235 46.4
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 3.6e-56 222.2 224 48.2
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 3.6e-56 222.2 247 47.0
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 3.6e-56 222.2 233 49.4
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.6e-56 221.9 235 48.1
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 4.6e-56 221.9 235 46.8
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 4.6e-56 221.9 231 46.3
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 6.1e-56 221.5 231 48.5
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 6.1e-56 221.5 225 49.8
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 6.1e-56 221.5 231 47.6
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 7.9e-56 221.1 231 48.9
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.0e-55 220.7 235 46.4
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.0e-55 220.7 247 47.0
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.8e-55 219.9 232 47.0
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.3e-55 219.5 230 47.8
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 3.0e-55 219.2 219 51.6
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 3.9e-55 218.8 233 47.6
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 5.1e-55 218.4 231 47.2
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 6.7e-55 218.0 230 47.4
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 6.7e-55 218.0 233 48.1
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 8.7e-55 217.6 231 46.8
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 1.1e-54 217.2 231 46.8
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.1e-54 217.2 235 47.7
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.1e-54 217.2 231 47.2
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.1e-54 217.2 230 47.0
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 1.1e-54 217.2 210 51.4
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 1.9e-54 216.5 231 46.3
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.5e-54 216.1 235 46.8
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 2.5e-54 216.1 231 46.8
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 4.3e-54 215.3 235 45.5
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 7.4e-54 214.5 242 45.9
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 7.4e-54 214.5 239 46.0
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 7.4e-54 214.5 235 46.4
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.6e-53 213.4 231 45.0
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 2.2e-53 213.0 231 45.5
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.2e-53 213.0 234 45.7
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 3.7e-53 212.2 235 45.5
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 3.7e-53 212.2 230 46.5
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 4.8e-53 211.8 233 47.6
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 6.3e-53 211.5 235 45.1
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 8.2e-53 211.1 231 45.5
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 1.1e-52 210.7 235 45.5
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 2.4e-52 209.5 231 45.0
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 3.1e-52 209.1 233 45.1
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 3.1e-52 209.1 235 45.1
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 4.1e-52 208.8 229 46.3
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 6.9e-52 208.0 231 45.5
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 2.6e-51 206.1 190 52.1
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.6e-51 206.1 217 47.5
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.7e-50 203.4 233 43.8
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.8e-50 202.2 217 46.1
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.4e-49 200.3 244 42.6
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 3.2e-49 199.1 234 47.4
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.4e-47 193.7 243 45.7
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 3.0e-47 192.6 300 36.7
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.4e-44 183.7 224 42.9
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 5.9e-43 178.3 184 48.9
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.6e-38 162.9 244 38.9
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 2.2e-37 159.8 149 54.4
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 4.8e-37 158.7 173 46.2
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.5e-35 152.5 180 42.8
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.8e-34 149.1 242 36.8
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 2.5e-33 146.4 170 40.6
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 9.4e-33 144.4 192 39.6
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.0e-31 141.0 234 38.0
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.0e-31 141.0 234 38.0
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 8.8e-31 137.9 239 36.4
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 3.8e-26 122.5 139 47.5
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-25 120.9 119 47.1
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 1.5e-25 120.6 70 75.7
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 7.2e-25 118.2 70 72.9
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 8.0e-24 114.8 127 43.3
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 6.5e-18 95.1 47 93.6
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.4e-15 87.4 76 59.2
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 7.5e-14 81.6 76 57.9
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 5.4e-12 75.5 59 52.5


User provided reference genes

Program Settings