Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0013 Ceratophyllum demersum HOM05D000084 ORTHO05D006510 3.8e-75 284.6 135 100.0
Nn3g18105 Nelumbo nucifera HOM05D000084 ORTHO05D006510 1.7e-35 152.9 199 44.7
Dinv36659 Davidia involucrata HOM05D000084 ORTHO05D006510 3.0e-35 152.1 193 46.1
TAR624G0760 Trochodendron aralioides HOM05D000084 ORTHO05D006510 3.9e-35 151.8 197 46.2
Actinidia20390 Actinidia chinensis HOM05D000084 ORTHO05D006510 5.6e-34 147.9 193 45.1
Cc06_g09960 Coffea canephora HOM05D000084 ORTHO05D006510 1.2e-33 146.7 195 45.6
TWI63G0910 Tripterygium wilfordii HOM05D000084 ORTHO05D006510 1.2e-33 146.7 196 42.3
AUR62010957 Chenopodium quinoa HOM05D000084 ORTHO05D006510 2.8e-33 145.6 200 43.0
AUR62021462 Chenopodium quinoa HOM05D000084 ORTHO05D006510 3.6e-33 145.2 200 42.5
PSO801G0738 Papaver somniferum HOM05D000084 ORTHO05D006510 3.6e-33 145.2 197 41.6
SGA_v2.0_scaffold2G01213 Striga asiatica HOM05D000084 ORTHO05D006510 3.6e-33 145.2 196 43.9
Gorai.001G006600 Gossypium raimondii HOM05D000084 ORTHO05D006510 6.2e-33 144.4 197 42.6
Thecc.09G106800 Theobroma cacao HOM05D000084 ORTHO05D006510 6.2e-33 144.4 197 42.6
MBI04_g04852_MAGBIO Magnolia biondii HOM05D000084 ORTHO05D006510 8.1e-33 144.1 197 42.6
DCAR_006483 Daucus carota HOM05D000084 ORTHO05D006510 1.1e-32 143.7 191 41.9
PSO339G3930 Papaver somniferum HOM05D000084 ORTHO05D006510 1.4e-32 143.3 197 41.6
HPP92_005268 Vanilla planifolia HOM05D000346 ORTHO05D006510 1.4e-32 143.3 197 43.1
Gohir.A07G005100 Gossypium hirsutum HOM05D000084 ORTHO05D006510 2.4e-32 142.5 197 42.1
Sc18g0001300 Simmondsia chinensis HOM05D000084 ORTHO05D006510 2.4e-32 142.5 195 42.6
CSS0015387 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D006510 3.1e-32 142.1 193 43.0
CSS0020134 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D006510 3.1e-32 142.1 193 43.0
COL.COLO4_34820 Corchorus olitorius HOM05D000084 ORTHO05D006510 3.1e-32 142.1 197 43.1
Ah.07g205480 Amaranthus hybridus HOM05D000084 ORTHO05D006510 4.0e-32 141.7 195 43.1
Sed0025602 Sechium edule HOM05D000084 ORTHO05D006510 6.9e-32 141.0 193 41.5
TWI34G0649 Tripterygium wilfordii HOM05D000084 ORTHO05D006510 6.9e-32 141.0 196 41.3
Haze_25774 Corylus avellana HOM05D000084 ORTHO05D006510 8.9e-32 140.6 195 42.6
Nn2g11673 Nelumbo nucifera HOM05D000084 ORTHO05D006510 8.9e-32 140.6 199 42.7
ClCG11G002360 Citrullus lanatus HOM05D000084 ORTHO05D006510 1.2e-31 140.2 193 42.5
Rhsim01G0101100 Rhododendron simsii HOM05D000084 ORTHO05D006510 2.0e-31 139.4 193 43.0
Hund26226 Selenicereus undatus HOM05D000084 ORTHO05D006510 2.6e-31 139.0 195 42.6
CsaV3_2G002150 Cucumis sativus L. HOM05D000084 ORTHO05D006510 4.4e-31 138.3 193 42.5
Duzib150G0885 Durio zibethinus HOM05D000084 ORTHO05D006510 4.4e-31 138.3 195 42.6
Lj4C435G7 Lonicera japonica HOM05D000084 ORTHO05D006510 4.4e-31 138.3 195 41.0
THA.LOC104814556 Tarenaya hassleriana HOM05D000084 ORTHO05D006510 4.4e-31 138.3 193 39.9
arahy.Tifrunner.gnm1.ann1.TVRM18 Arachis hypogaea HOM05D000084 ORTHO05D006510 5.8e-31 137.9 194 43.8
Ciclev10008156m.g Citrus clementina HOM05D000084 ORTHO05D006510 5.8e-31 137.9 193 41.5
Lj4A455G36 Lonicera japonica HOM05D000084 ORTHO05D006510 5.8e-31 137.9 193 40.9
Cfa003233 Carpinus fangiana HOM05D000084 ORTHO05D006510 7.6e-31 137.5 195 42.1
Lalb_Chr05g0223001 Lupinus albus HOM05D000084 ORTHO05D006510 7.6e-31 137.5 193 42.5
arahy.Tifrunner.gnm1.ann1.59QKRW Arachis hypogaea HOM05D000084 ORTHO05D006510 9.9e-31 137.1 194 43.8
MELO3C004567.2 Cucumis melo HOM05D000084 ORTHO05D006510 9.9e-31 137.1 193 42.0
Os06g0334400 Oryza sativa ssp. japonica HOM05D000084 ORTHO05D006510 9.9e-31 137.1 199 41.2
EL10Ac8g18438 Beta vulgaris HOM05D000084 ORTHO05D006510 2.2e-30 136.0 195 42.1
ECA240G2238 Erigeron canadensis HOM05D000084 ORTHO05D006510 2.2e-30 136.0 199 41.2
Lj4g0014422 Lotus japonicus HOM05D000084 ORTHO05D006510 2.2e-30 136.0 200 40.0
Phvul.002G312000 Phaseolus vulgaris HOM05D000084 ORTHO05D006510 2.2e-30 136.0 198 40.4
vmacro20724 Vaccinium macrocarpon HOM05D000084 ORTHO05D006510 2.2e-30 136.0 193 41.5
VMungo0251G3104 Vigna mungo HOM05D000084 ORTHO05D006510 2.2e-30 136.0 198 39.9
GSVIVG01015360001 Vitis vinifera HOM05D000084 ORTHO05D006510 2.2e-30 136.0 194 41.8
Gohir.D07G007000 Gossypium hirsutum HOM05D000084 ORTHO05D006510 2.9e-30 135.6 197 41.1
Manes.03G023300 Manihot esculenta HOM05D000084 ORTHO05D006510 2.9e-30 135.6 193 41.5
Potri.018G083300 Populus trichocarpa HOM05D000084 ORTHO05D006510 3.8e-30 135.2 195 41.0
Medtr8g103240 Medicago truncatula HOM05D000084 ORTHO05D006510 4.9e-30 134.8 201 40.3
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 6.4e-30 134.4 195 43.6
Ca_17326_v3 Cicer arietinum L. HOM05D000084 ORTHO05D006510 8.4e-30 134.0 201 39.3
Eucgr.C01269 Eucalyptus grandis HOM05D000084 ORTHO05D006510 8.4e-30 134.0 197 42.1
Psat7g015120 Pisum sativum HOM05D000084 ORTHO05D006510 8.4e-30 134.0 201 38.3
Ah.13g070400 Amaranthus hybridus HOM05D000084 ORTHO05D006510 1.1e-29 133.7 199 41.7
PGR142G1818 Punica granatum HOM05D000084 ORTHO05D006510 1.1e-29 133.7 193 42.5
Dinv41626 Davidia involucrata HOM05D000084 ORTHO05D006510 1.4e-29 133.3 193 42.5
Peaxi162Scf00231g00328 Petunia axillaris HOM05D000084 ORTHO05D006510 1.4e-29 133.3 193 42.0
CiPaw.03G228900 Carya illinoinensis HOM05D000084 ORTHO05D006510 1.9e-29 132.9 195 41.0
Glyma.08G037300 Glycine max HOM05D000084 ORTHO05D006510 1.9e-29 132.9 200 40.0
Peaxi162Scf01363g00027 Petunia axillaris HOM05D000084 ORTHO05D006510 1.9e-29 132.9 193 42.0
TPR.G23474 Trifolium pratense HOM05D000084 ORTHO05D006510 1.9e-29 132.9 198 39.9
Thhalv10025049m.g Eutrema salsugineum HOM05D000084 ORTHO05D006510 3.2e-29 132.1 195 38.5
PGSC0003DMG400000305 Solanum tuberosum HOM05D000084 ORTHO05D006510 3.2e-29 132.1 191 40.8
Sabra18G0071200 Salix brachista HOM05D000084 ORTHO05D006510 4.2e-29 131.7 193 39.9
SalBow6G1481 Salvia bowleyana HOM05D000084 ORTHO05D006510 4.2e-29 131.7 196 41.3
Sopen12g003180 Solanum pennellii HOM05D000084 ORTHO05D006510 4.2e-29 131.7 191 40.8
Solyc12g007200.2 Solanum lycopersicum HOM05D000084 ORTHO05D006510 5.4e-29 131.3 191 40.8
FvH4_1g05460 Fragaria vesca HOM05D000084 ORTHO05D006510 1.2e-28 130.2 192 41.1
FAN19G1244 Fragaria x ananassa HOM05D000084 ORTHO05D006510 1.2e-28 130.2 192 41.1
HanXRQChr03g0061471 Helianthus annuus HOM05D000084 ORTHO05D006510 1.2e-28 130.2 200 42.5
Nitab4.5_0004391g0030 Nicotiana tabacum HOM05D000084 ORTHO05D006510 1.2e-28 130.2 193 42.0
Atru.BG.25.p Acer truncatum HOM05D000084 ORTHO05D006510 1.6e-28 129.8 191 40.3
ATR0315G137 Amborella trichopoda HOM05D000084 ORTHO05D006510 2.7e-28 129.0 200 39.0
Glyma.05G229800 Glycine max HOM05D000084 ORTHO05D006510 2.7e-28 129.0 201 38.8
Carub.0007s1166 Capsella rubella HOM05D000084 ORTHO05D006510 3.5e-28 128.6 193 38.9
Migut.J01141 Erythranthe guttata HOM05D000084 ORTHO05D006510 6.0e-28 127.9 194 39.2
Glyma.07G084300 Glycine max HOM05D000084 ORTHO05D006510 6.0e-28 127.9 190 40.5
Nitab4.5_0003733g0030 Nicotiana tabacum HOM05D000084 ORTHO05D006510 6.0e-28 127.9 193 42.0
FAN26G1191 Fragaria x ananassa HOM05D000084 ORTHO05D006510 1.0e-27 127.1 192 40.1
CARHR236710 Cardamine hirsuta HOM05D000084 ORTHO05D006510 1.3e-27 126.7 193 37.8
BcaNung01340 Brassica carinata HOM05D000084 ORTHO05D006510 1.7e-27 126.3 194 39.7
AL7G23480 Arabidopsis lyrata HOM05D000084 ORTHO05D006510 2.3e-27 125.9 197 38.1
AT4G28980 Arabidopsis thaliana HOM05D000084 ORTHO05D006510 2.3e-27 125.9 193 37.3
FAN26G2733 Fragaria x ananassa HOM05D000084 ORTHO05D006510 2.3e-27 125.9 192 40.1
QL02p046152 Quercus lobata HOM05D000084 ORTHO05D006510 2.3e-27 125.9 193 40.4
Zm00001eb278130 Zea mays HOM05D000084 ORTHO05D006510 3.9e-27 125.2 195 38.5
Aqoxy7G01577 Aquilegia oxysepala HOM05D000084 ORTHO05D006510 6.6e-27 124.4 196 40.8
BcaC09g51674 Brassica carinata HOM05D000084 ORTHO05D006510 6.6e-27 124.4 181 39.8
Cpa.g.sc23.77 Carica papaya HOM05D000084 ORTHO05D006510 6.6e-27 124.4 193 37.3
CAN.G1774.11 Capsicum annuum HOM05D000084 ORTHO05D006510 1.1e-26 123.6 194 41.2
Oeu002250.1 Olea europaea HOM05D000084 ORTHO05D006510 1.1e-26 123.6 191 38.7
CANSAT02G0004 Cannabis sativa HOM05D000084 ORTHO05D006510 1.5e-26 123.2 193 38.9
RcHm_v2.0_Chr2g0091141 Rosa chinensis HOM05D000084 ORTHO05D006510 1.5e-26 123.2 192 39.1
FAN23G1577 Fragaria x ananassa HOM05D002640 ORTHO05D006510 1.9e-26 122.9 192 39.6
arahy.Tifrunner.gnm1.ann1.HT6INV Arachis hypogaea HOM05D000084 ORTHO05D006510 2.5e-26 122.5 178 41.6
FAN28G2964 Fragaria x ananassa HOM05D000084 ORTHO05D006510 3.3e-26 122.1 193 39.9
TAR636G2755 Trochodendron aralioides HOM05D000084 ORTHO05D006510 7.3e-26 120.9 160 42.5
Lsat_1_v5_gn_7_42060 Lactuca sativa HOM05D000084 ORTHO05D006510 1.3e-25 120.2 201 39.3
Prupe.7G226600 Prunus persica HOM05D000084 ORTHO05D006510 2.1e-25 119.4 197 38.6
BraA01t00847Z Brassica rapa HOM05D000084 ORTHO05D006510 3.1e-24 115.5 186 38.2
Sp7g26920 Schrenkiella parvula HOM05D000084 ORTHO05D006510 3.1e-24 115.5 194 36.6
unitig_27.g24906 Utricularia gibba HOM05D000084 ORTHO05D006510 4.0e-24 115.2 191 38.7
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.2e-23 113.6 176 37.5
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.5e-23 113.2 186 37.1
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 1.5e-23 113.2 186 37.1
MD15G1190500 Malus domestica HOM05D000084 ORTHO05D006510 1.5e-23 113.2 179 39.7
Hund09219 Selenicereus undatus HOM05D000084 ORTHO05D006510 1.5e-23 113.2 174 39.7
MD02G1062700 Malus domestica HOM05D000084 ORTHO05D006510 2.0e-23 112.8 178 39.3
Aa31LG2G21310 Aethionema arabicum HOM05D000084 ORTHO05D006510 8.4e-22 107.5 194 35.1
VMungo0464G0290 Vigna mungo HOM05D000084 ORTHO05D006510 8.4e-22 107.5 174 37.9
Medtr6g087920 Medicago truncatula HOM05D000084 ORTHO05D006510 7.1e-21 104.4 155 38.7
Glyma.09G192600 Glycine max HOM05D000084 ORTHO05D006510 1.6e-20 103.2 190 35.8
BcaNung00442 Brassica carinata HOM05D000084 ORTHO05D006510 3.5e-20 102.1 191 35.1
Ca_25542_v3 Cicer arietinum L. HOM05D000084 ORTHO05D006510 1.3e-19 100.1 147 38.8
TPR.G28416 Trifolium pratense HOM05D000084 ORTHO05D006510 3.0e-19 99.0 149 36.9
Phvul.004G165900 Phaseolus vulgaris HOM05D000084 ORTHO05D006510 4.8e-17 91.7 193 33.2
Lalb_Chr24g0397421 Lupinus albus HOM05D000084 ORTHO05D006510 6.4e-14 81.3 134 35.1
Mapoly0029s0026 Marchantia polymorpha HOM05D000084 ORTHO05D006510 7.1e-13 77.8 177 29.4
Psat1g041480 Pisum sativum HOM05D000084 ORTHO05D006510 1.2e-12 77.0 132 34.8
AagrBONN_evm.TU.Sc2ySwM_344.4329 Anthoceros agrestis HOM05D000084 ORTHO05D006510 1.3e-11 73.6 176 30.1
SEGI_15496 Sequoiadendron giganteum HOM05D000084 ORTHO05D006510 3.9e-11 72.0 146 35.6
arahy.Tifrunner.gnm1.ann1.MYD2LQ Arachis hypogaea HOM05D000084 ORTHO05D006510 4.3e-10 68.6 134 29.9
arahy.Tifrunner.gnm1.ann1.Z2KR9B Arachis hypogaea HOM05D000084 ORTHO05D006510 4.3e-10 68.6 134 29.9
CAN.G835.3 Capsicum annuum HOM05D000084 ORTHO05D006510 5.6e-10 68.2 64 46.9
CiPaw.04G162400 Carya illinoinensis HOM05D000084 ORTHO05D006510 2.1e-09 66.2 137 32.8
Gohir.D05G026000 Gossypium hirsutum HOM05D000084 ORTHO05D006510 4.8e-09 65.1 33 78.8
Gorai.009G026100 Gossypium raimondii HOM05D000084 ORTHO05D006510 4.8e-09 65.1 33 78.8
vmacro09286 Vaccinium macrocarpon HOM05D000084 ORTHO05D000363 2.4e-08 62.8 92 41.3
Lj2g0003735 Lotus japonicus HOM05D000084 ORTHO05D006510 5.3e-08 61.6 31 83.9
CDE07G1532 Ceratophyllum demersum HOM05D000084 ORTHO05D002355 1.2e-07 60.5 104 35.6
SMO340G0302 Selaginella moellendorffii HOM05D000084 ORTHO05D006510 1.5e-07 60.1 31 74.2
BolC2t10296H Brassica oleracea HOM05D000084 ORTHO05D000363 2.9e-06 55.8 123 31.7
SGA_v2.0_scaffold247G44836 Striga asiatica HOM05D046245 ORTHO05D401137 2.9e-06 55.8 62 48.4
Atru.chr3.663 Acer truncatum HOM05D000137 ORTHO05D000382 3.8e-06 55.5 116 33.6
Pp3c1_19220 Physcomitrium patens HOM05D000084 ORTHO05D004328 3.8e-06 55.5 144 25.7
C02p42590 Brassica napus HOM05D000084 ORTHO05D011099 6.5e-06 54.7 123 30.9


User provided reference genes

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