Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.1e-57 225.3 103 100.0
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.0e-27 126.7 97 60.8
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 6.6e-27 124.0 96 59.4
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.5e-26 122.9 98 62.2
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.5e-26 122.1 100 60.0
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.5e-26 122.1 100 60.0
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 7.3e-26 120.6 103 60.2
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 9.5e-26 120.2 97 62.9
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.1e-25 119.0 80 67.5
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 3.6e-25 118.2 103 60.2
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 6.2e-25 117.5 94 59.6
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 6.2e-25 117.5 98 55.1
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 6.2e-25 117.5 98 57.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 8.1e-25 117.1 96 60.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 8.1e-25 117.1 96 57.3
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.1e-24 116.7 99 55.6
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.1e-24 116.7 97 58.8
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.1e-24 116.7 102 54.9
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.1e-24 116.7 95 58.9
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.4e-24 116.3 98 59.2
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.4e-24 116.3 100 59.0
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.4e-24 116.3 98 55.1
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 1.8e-24 115.9 66 75.8
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.8e-24 115.9 101 56.4
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.8e-24 115.9 101 56.4
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 1.8e-24 115.9 100 59.0
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.8e-24 115.9 93 58.1
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 2.4e-24 115.5 96 56.2
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 3.1e-24 115.2 97 59.8
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 3.1e-24 115.2 95 60.0
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 3.1e-24 115.2 101 58.4
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 4.0e-24 114.8 97 57.7
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 6.8e-24 114.0 96 56.2
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 6.8e-24 114.0 96 58.3
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 8.9e-24 113.6 78 65.4
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.2e-23 113.2 98 60.2
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 1.2e-23 113.2 96 58.3
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.2e-23 113.2 96 56.2
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.0e-23 112.5 96 57.3
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 2.6e-23 112.1 96 57.3
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.6e-23 112.1 102 55.9
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.6e-23 112.1 96 57.3
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 3.4e-23 111.7 98 62.2
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.4e-23 111.3 96 57.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.8e-23 110.9 99 58.6
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 5.8e-23 110.9 97 57.7
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 5.8e-23 110.9 96 55.2
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 7.6e-23 110.5 91 59.3
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 7.6e-23 110.5 100 56.0
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 7.6e-23 110.5 98 61.2
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 7.6e-23 110.5 98 61.2
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 7.6e-23 110.5 100 54.0
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 7.6e-23 110.5 100 54.0
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 7.6e-23 110.5 100 58.0
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 9.9e-23 110.2 93 54.8
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 1.3e-22 109.8 96 55.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 1.3e-22 109.8 100 53.0
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 1.3e-22 109.8 96 55.2
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.7e-22 109.4 97 53.6
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 1.7e-22 109.4 110 55.5
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.2e-22 109.0 97 55.7
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.9e-22 108.6 66 71.2
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 3.8e-22 108.2 98 53.1
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 6.4e-22 107.5 96 54.2
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 8.4e-22 107.1 96 56.2
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 8.4e-22 107.1 102 55.9
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.1e-21 106.7 96 54.2
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.4e-21 106.3 103 53.4
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 1.9e-21 105.9 96 52.1
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.4e-21 105.5 97 54.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 2.4e-21 105.5 96 55.2
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.4e-21 105.5 103 52.4
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 2.4e-21 105.5 96 54.2
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 3.2e-21 105.1 100 54.0
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.2e-21 104.8 73 61.6
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 5.4e-21 104.4 97 52.6
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 5.4e-21 104.4 96 56.2
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 7.1e-21 104.0 104 51.9
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.1e-20 102.4 103 50.5
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 2.7e-20 102.1 62 67.7
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 2.7e-20 102.1 62 67.7
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 2.7e-20 102.1 96 52.1
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 2.7e-20 102.1 62 67.7
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 2.7e-20 102.1 62 67.7
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 2.7e-20 102.1 62 67.7
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 2.7e-20 102.1 96 52.1
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 3.5e-20 101.7 96 53.1
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 4.6e-20 101.3 96 53.1
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.6e-20 101.3 72 61.1
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 6.0e-20 100.9 96 51.0
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 6.0e-20 100.9 70 62.9
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.0e-19 100.1 61 65.6
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.0e-19 100.1 98 51.0
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.3e-19 99.8 107 52.3
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.7e-19 99.4 96 51.0
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.7e-19 99.4 72 59.7
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.3e-19 99.0 94 48.9
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 5.1e-19 97.8 102 51.0
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 5.1e-19 97.8 72 58.3
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 6.6e-19 97.4 60 66.7
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.1e-18 96.7 55 70.9
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.1e-18 96.7 101 48.5
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 1.9e-18 95.9 94 47.9
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 3.3e-18 95.1 97 48.5
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 4.3e-18 94.7 51 72.5
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 9.6e-18 93.6 72 54.2
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.3e-17 93.2 130 43.8
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.6e-17 92.8 72 54.2
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.8e-17 91.3 47 78.7
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 8.1e-17 90.5 75 56.0
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 1.4e-16 89.7 98 46.9
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.4e-13 79.7 96 44.8
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 5.4e-13 77.8 70 51.4
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 7.1e-13 77.4 96 45.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.6e-12 76.3 73 54.8
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 3.3e-10 68.6 33 81.8
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.3e-09 66.6 33 81.8
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 1.3e-09 66.6 62 54.8
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.1e-09 65.9 48 60.4
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 1.4e-08 63.2 56 50.0
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.8e-08 62.8 33 75.8
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.7e-06 56.2 71 42.3
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.9e-06 55.5 66 45.5
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 4.9e-06 54.7 35 65.7


User provided reference genes

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