Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 9.1e-221 770.0 407 100.0
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 8.9e-67 258.5 443 43.1
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 8.3e-57 225.3 411 41.4
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.1e-56 224.9 275 52.4
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 1.4e-56 224.6 447 40.3
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 9.2e-56 221.9 444 38.5
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 1.6e-55 221.1 426 40.4
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 3.9e-54 216.5 440 37.7
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 1.9e-53 214.2 456 38.2
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 1.9e-53 214.2 444 38.5
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.5e-53 213.8 249 53.4
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 7.3e-53 212.2 445 37.8
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 3.6e-52 209.9 454 37.0
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 6.2e-52 209.1 449 38.1
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 4.0e-51 206.5 445 37.5
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 5.2e-51 206.1 444 38.1
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 6.8e-51 205.7 448 37.1
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 6.8e-51 205.7 408 38.5
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 2.0e-50 204.1 407 39.3
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 3.4e-50 203.4 448 39.3
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 3.4e-50 203.4 444 36.7
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 2.2e-49 200.7 423 38.1
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 3.7e-49 199.9 422 36.0
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 1.4e-48 198.0 421 37.3
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 3.2e-48 196.8 450 36.4
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 4.1e-48 196.4 433 38.1
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 9.2e-48 195.3 425 36.2
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 1.2e-47 194.9 440 35.5
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 2.1e-47 194.1 475 36.8
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 1.0e-46 191.8 424 37.3
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 1.7e-46 191.0 472 35.4
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.3e-46 190.7 472 35.2
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 2.3e-46 190.7 278 46.8
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 3.0e-46 190.3 452 36.3
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 3.9e-46 189.9 414 37.7
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.5e-45 188.0 466 34.8
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 4.3e-45 186.4 495 34.7
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 5.6e-45 186.0 465 35.3
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 7.3e-45 185.7 411 36.0
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 9.6e-45 185.3 447 34.7
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 2.8e-44 183.7 422 38.2
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 3.6e-44 183.3 464 34.7
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 3.6e-44 183.3 458 34.5
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 1.4e-43 181.4 413 36.8
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 3.1e-43 180.3 464 32.8
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 8.9e-43 178.7 439 37.6
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 1.2e-42 178.3 450 34.0
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 1.2e-42 178.3 449 34.3
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 3.4e-42 176.8 443 37.0
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 5.8e-42 176.0 423 36.6
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 9.9e-42 175.3 444 33.1
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 2.2e-41 174.1 411 34.5
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 2.9e-41 173.7 444 31.8
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 3.8e-41 173.3 415 34.7
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 5.4e-40 169.5 465 32.7
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 1.2e-39 168.3 453 32.7
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 2.1e-39 167.5 260 45.0
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 2.7e-39 167.2 454 36.6
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 3.5e-39 166.8 467 32.8
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 4.6e-39 166.4 413 35.8
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 4.6e-39 166.4 417 36.9
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 7.8e-39 165.6 459 31.8
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 1.0e-38 165.2 463 32.2
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 1.0e-38 165.2 428 35.7
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 3.9e-38 163.3 247 41.7
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 3.9e-38 163.3 243 44.4
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 6.6e-38 162.5 409 35.0
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 2.8e-36 157.1 254 39.4
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 3.6e-36 156.8 467 30.6
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 1.1e-35 155.2 258 41.1
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 1.1e-35 155.2 409 33.7
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 1.8e-35 154.5 436 31.0
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 6.9e-35 152.5 218 45.9
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 9.0e-35 152.1 465 30.3
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.5e-34 151.4 221 46.6
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 9.9e-34 148.7 177 51.4
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 3.8e-33 146.7 459 34.6
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 4.9e-33 146.4 394 35.8
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 6.4e-33 146.0 136 60.3
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 1.9e-32 144.4 404 35.6
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 2.1e-31 141.0 444 30.4
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 6.0e-31 139.4 427 29.7
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 7.8e-31 139.0 430 29.3
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 2.3e-30 137.5 365 34.2
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 3.9e-30 136.7 255 39.2
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 8.7e-30 135.6 393 32.8
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 1.1e-29 135.2 434 32.3
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 2.5e-29 134.0 411 29.4
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 3.3e-29 133.7 434 29.0
Sc23g0002870 Simmondsia chinensis HOM05D005648 ORTHO05D007357 3.3e-29 133.7 445 33.0
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 1.3e-28 131.7 423 35.0
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 1.6e-28 131.3 441 31.5
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 2.8e-28 130.6 424 33.7
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 6.2e-28 129.4 271 37.3
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 2.4e-27 127.5 233 38.6
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 2.4e-27 127.5 244 38.1
BcaC06g31348 Brassica carinata HOM05D005648 ORTHO05D007357 3.1e-27 127.1 466 29.2
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 5.3e-27 126.3 262 37.0
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 2.0e-26 124.4 246 40.2
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 2.0e-26 124.4 437 29.7
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 2.0e-26 124.4 428 30.8
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 2.0e-26 124.4 254 36.2
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 4.5e-26 123.2 442 33.0
vmacro20940 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 6.4e-25 119.4 148 50.0
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 1.9e-24 117.9 275 35.6
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 1.0e-22 112.1 347 32.0
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 8.7e-22 109.0 411 29.9
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 2.1e-20 104.4 407 27.8
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 4.8e-20 103.2 412 27.7
MBI01_g12685_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D007357 1.1e-19 102.1 90 60.0
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 2.9e-17 94.0 316 30.1
Zm00001eb404350 Zea mays HOM05D005648 ORTHO05D007357 5.5e-16 89.7 348 30.7
CSS0016999 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 2.1e-15 87.8 80 65.0
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 2.1e-15 87.8 347 29.7
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 2.7e-15 87.4 406 29.6
Os03g0106300 Oryza sativa ssp. japonica HOM05D005648 ORTHO05D007357 4.6e-15 86.7 498 26.3
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 2.8e-12 77.4 325 29.8
MBI19_g11759_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002414 3.7e-12 77.0 134 40.3
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.4e-11 75.1 64 60.9
MBI12_g03930_MAGBIO Magnolia biondii HOM05D000084 ORTHO05D014274 1.5e-10 71.6 58 70.7
MBI18_g40590_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.6e-10 70.9 267 30.0
SalBow3G1978 Salvia bowleyana HOM05D005648 ORTHO05D007357 2.6e-10 70.9 81 56.8
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 4.5e-10 70.1 64 56.2
SHI13452 Sapria himalayana HOM05D005648 ORTHO05D007357 5.8e-10 69.7 106 44.3
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.7e-09 68.2 70 54.3
Ciclev10024524m.g Citrus clementina HOM05D005648 ORTHO05D007357 2.9e-09 67.4 56 62.5
FAN10G0802 Fragaria x ananassa HOM05D005648 ORTHO05D007357 6.5e-09 66.2 80 55.0
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 3.2e-08 63.9 121 38.0
MBI13_g41693_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.6e-07 61.6 52 71.2
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 1.3e-06 58.5 267 28.1


User provided reference genes

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