Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3512 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 8.0e-172 607.8 311 100.0
CDE08G0845 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 1.6e-151 540.4 338 85.2
Nn4g24834 Nelumbo nucifera HOM05D007280 ORTHO05D009108 1.9e-72 277.7 344 51.2
TAR622G0173 Trochodendron aralioides HOM05D007280 ORTHO05D009108 2.1e-63 247.7 322 48.1
Haze_01575 Corylus avellana HOM05D007280 ORTHO05D009108 1.6e-58 231.5 349 44.1
Aqoxy3G04194 Aquilegia oxysepala HOM05D007280 ORTHO05D009108 1.0e-57 228.8 292 46.6
Hma1.2p1_0319F.1_g123900 Hydrangea macrophylla HOM05D007280 ORTHO05D009108 3.0e-57 227.3 346 41.6
Cfa015100 Carpinus fangiana HOM05D007280 ORTHO05D009108 5.0e-57 226.5 349 43.6
Thecc.09G239200 Theobroma cacao HOM05D007280 ORTHO05D009108 6.6e-57 226.1 345 42.3
DCAR_023520 Daucus carota HOM05D007280 ORTHO05D009108 1.1e-56 225.3 349 41.0
Peaxi162Scf00329g00097 Petunia axillaris HOM05D007280 ORTHO05D009108 1.1e-56 225.3 259 47.1
Ca_12458_v3 Cicer arietinum L. HOM05D007280 ORTHO05D009108 7.3e-56 222.6 345 39.4
Phvul.003G013000 Phaseolus vulgaris HOM05D007280 ORTHO05D009108 1.0e-54 218.8 346 39.6
VMungo1215G2162 Vigna mungo HOM05D007280 ORTHO05D009108 1.4e-54 218.4 345 39.1
Cc11_g02870 Coffea canephora HOM05D007280 ORTHO05D009108 8.9e-54 215.7 350 41.1
Sabra08G0108200 Salix brachista HOM05D007280 ORTHO05D009108 4.4e-53 213.4 341 40.2
Cpa.g.sc2.97 Carica papaya HOM05D007280 ORTHO05D009108 7.5e-53 212.6 324 42.6
Sopen04g003730 Solanum pennellii HOM05D007280 ORTHO05D009108 7.5e-53 212.6 261 44.8
Lj2g0005518 Lotus japonicus HOM05D007280 ORTHO05D009108 9.8e-53 212.2 349 39.3
Psat6g095680 Pisum sativum HOM05D007280 ORTHO05D009108 9.8e-53 212.2 349 38.7
Rhsim04G0168900 Rhododendron simsii HOM05D007280 ORTHO05D009108 2.9e-52 210.7 345 40.3
Solyc04g008570.4 Solanum lycopersicum HOM05D007280 ORTHO05D009108 4.9e-52 209.9 261 44.4
FvH4_4g36140 Fragaria vesca HOM05D007280 ORTHO05D009108 1.1e-51 208.8 346 40.2
CiPaw.05G161600 Carya illinoinensis HOM05D007280 ORTHO05D009108 2.4e-51 207.6 299 44.5
FAN12G0470 Fragaria x ananassa HOM05D007280 ORTHO05D009108 2.4e-51 207.6 347 40.1
Prupe.1G342100 Prunus persica HOM05D007280 ORTHO05D009108 5.4e-51 206.5 342 39.8
PGSC0003DMG400031369 Solanum tuberosum HOM05D007280 ORTHO05D009108 7.0e-51 206.1 261 45.2
ClCG01G006970 Citrullus lanatus HOM05D007280 ORTHO05D009108 9.2e-51 205.7 322 41.0
MELO3C027064.2 Cucumis melo HOM05D007280 ORTHO05D009108 9.2e-51 205.7 279 41.9
Lj3P855T51 Lonicera japonica HOM05D007280 ORTHO05D009108 1.2e-50 205.3 295 40.3
TPR.G35854 Trifolium pratense HOM05D007280 ORTHO05D009108 1.6e-50 204.9 349 36.7
MD16G1008400 Malus domestica HOM05D007280 ORTHO05D009108 2.0e-50 204.5 345 38.6
CAN.G458.1 Capsicum annuum HOM05D007280 ORTHO05D009108 2.7e-50 204.1 260 44.6
CsaV3_5G017390 Cucumis sativus L. HOM05D007280 ORTHO05D009108 2.7e-50 204.1 320 40.0
FAN07G2371 Fragaria x ananassa HOM05D007280 ORTHO05D009108 6.0e-50 203.0 313 41.2
Gohir.D09G108900 Gossypium hirsutum HOM05D007280 ORTHO05D009108 6.0e-50 203.0 319 41.7
Gorai.006G126500 Gossypium raimondii HOM05D007280 ORTHO05D009108 7.8e-50 202.6 319 41.4
Gohir.D06G095050 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.0e-49 202.2 319 41.1
THA.LOC104819105 Tarenaya hassleriana HOM05D007280 ORTHO05D009108 1.7e-49 201.4 303 39.9
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 2.3e-49 201.1 344 38.1
Medtr1g033840 Medicago truncatula HOM05D007280 ORTHO05D009108 3.0e-49 200.7 343 37.3
Potri.010G098700 Populus trichocarpa HOM05D007280 ORTHO05D009108 8.6e-49 199.1 347 38.6
Glyma.07G177100 Glycine max HOM05D007280 ORTHO05D009108 1.5e-48 198.4 310 39.7
Sabra08G0108600 Salix brachista HOM05D007280 ORTHO05D009108 1.5e-48 198.4 317 39.7
SalBow3G1417 Salvia bowleyana HOM05D007280 ORTHO05D009108 1.5e-48 198.4 357 37.0
Sed0008466 Sechium edule HOM05D007280 ORTHO05D009108 1.9e-48 198.0 319 41.1
GSVIVG01010259001 Vitis vinifera HOM05D007280 ORTHO05D009108 2.5e-48 197.6 204 52.0
TWI74G1184 Tripterygium wilfordii HOM05D007280 ORTHO05D009108 3.3e-48 197.2 347 39.8
Gohir.A09G112200 Gossypium hirsutum HOM05D007280 ORTHO05D009108 5.6e-48 196.4 230 44.8
Ciclev10004581m.g Citrus clementina HOM05D007280 ORTHO05D009108 7.3e-48 196.1 320 40.3
GSVIVG01032336001 Vitis vinifera HOM05D007280 ORTHO05D009108 2.1e-47 194.5 204 51.5
Lalb_Chr17g0338341 Lupinus albus HOM05D007280 ORTHO05D009108 2.8e-47 194.1 319 39.5
MSTRG.17728 Avicennia marina HOM05D007280 ORTHO05D009108 3.6e-47 193.7 361 38.8
QL03p041451 Quercus lobata HOM05D007280 ORTHO05D009108 1.1e-46 192.2 324 39.2
Glyma.20G010600 Glycine max HOM05D007280 ORTHO05D009108 6.8e-46 189.5 303 38.9
Manes.17G093400 Manihot esculenta HOM05D007280 ORTHO05D009108 6.8e-46 189.5 325 39.4
MBI03_g37599_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 3.4e-45 187.2 254 46.1
Eucgr.B02618 Eucalyptus grandis HOM05D007280 ORTHO05D009108 4.4e-45 186.8 295 40.3
HanXRQChr16g0526501 Helianthus annuus HOM05D007280 ORTHO05D009108 5.8e-45 186.4 318 38.1
Aa31sc65G20 Aethionema arabicum HOM05D007280 ORTHO05D009108 9.8e-45 185.7 311 38.3
COL.COLO4_36459 Corchorus olitorius HOM05D007280 ORTHO05D009108 3.7e-44 183.7 294 39.5
PSO063G1027 Papaver somniferum HOM05D007280 ORTHO05D009108 1.9e-43 181.4 318 37.7
PSO782G1316 Papaver somniferum HOM05D007280 ORTHO05D009108 4.1e-43 180.3 318 37.4
ATR0705G126 Amborella trichopoda HOM05D007280 ORTHO05D009108 1.6e-42 178.3 260 39.6
Ah.13g070140 Amaranthus hybridus HOM05D007280 ORTHO05D009108 1.7e-41 174.9 315 35.2
CSS0013384 Camellia sinensis var. sinensis HOM05D007280 ORTHO05D009108 1.7e-41 174.9 369 36.3
Sabra10G0071200 Salix brachista HOM05D007280 ORTHO05D009108 3.9e-41 173.7 317 37.9
Lsat_1_v5_gn_4_26101 Lactuca sativa HOM05D007280 ORTHO05D009108 6.6e-41 172.9 240 41.2
Lsat_1_v5_gn_3_27640 Lactuca sativa HOM05D007280 ORTHO05D009108 1.9e-40 171.4 291 37.1
Sp6g30250 Schrenkiella parvula HOM05D007280 ORTHO05D009108 2.5e-40 171.0 305 36.7
Duzib168G0083 Durio zibethinus HOM05D007280 ORTHO05D009108 7.3e-40 169.5 297 38.4
Dinv17118 Davidia involucrata HOM05D007280 ORTHO05D009108 2.1e-39 167.9 197 48.2
AT5G13770 Arabidopsis thaliana HOM05D007280 ORTHO05D009108 3.1e-38 164.1 307 35.8
CDE05G2558 Ceratophyllum demersum HOM05D001580 ORTHO05D001517 3.1e-38 164.1 129 73.6
Carub.0006s1195 Capsella rubella HOM05D007280 ORTHO05D009108 4.0e-38 163.7 255 37.3
ECA246G2688 Erigeron canadensis HOM05D007280 ORTHO05D009108 8.9e-38 162.5 183 48.1
AL6G24390 Arabidopsis lyrata HOM05D007280 ORTHO05D009108 1.2e-37 162.2 307 35.5
A02p02170 Brassica napus HOM05D007280 ORTHO05D009108 1.2e-37 162.2 252 37.3
Thhalv10016019m.g Eutrema salsugineum HOM05D007280 ORTHO05D009108 1.2e-37 162.2 255 38.4
BraA02t05191Z Brassica rapa HOM05D007280 ORTHO05D009108 2.6e-37 161.0 252 36.9
C02p06420 Brassica napus HOM05D007280 ORTHO05D009108 1.7e-36 158.3 253 36.4
BolC2t06588H Brassica oleracea HOM05D007280 ORTHO05D009108 1.7e-36 158.3 253 36.4
AUR62006107 Chenopodium quinoa HOM05D007280 ORTHO05D009108 2.2e-36 157.9 341 32.6
Potri.008G142900 Populus trichocarpa HOM05D007280 ORTHO05D009108 2.9e-36 157.5 299 35.8
AUR62019383 Chenopodium quinoa HOM05D007280 ORTHO05D009108 3.8e-36 157.1 341 33.4
Migut.N02514 Erythranthe guttata HOM05D007280 ORTHO05D009108 8.4e-36 156.0 264 40.2
Oeu006355.1 Olea europaea HOM05D007280 ORTHO05D009108 8.4e-36 156.0 327 37.0
Os04g0583101 Oryza sativa ssp. japonica HOM05D007280 ORTHO05D009108 1.9e-35 154.8 263 36.9
PGR044G2110 Punica granatum HOM05D007280 ORTHO05D009108 1.6e-34 151.8 357 33.9
Ah.07g205740 Amaranthus hybridus HOM05D007280 ORTHO05D009108 1.9e-32 144.8 323 31.6
BcaNung04186 Brassica carinata HOM05D007280 ORTHO05D009108 4.3e-32 143.7 261 34.5
Nitab4.5_0003882g0050 Nicotiana tabacum HOM05D007280 ORTHO05D009108 1.6e-31 141.7 126 57.1
Sc14g0006690 Simmondsia chinensis HOM05D007280 ORTHO05D009108 4.7e-31 140.2 182 42.3
Zm00001eb072910 Zea mays HOM05D007280 ORTHO05D009108 1.1e-30 139.0 263 35.7
Nitab4.5_0000129g0410 Nicotiana tabacum HOM05D007280 ORTHO05D009108 1.8e-30 138.3 126 57.1
CARHR199670 Cardamine hirsuta HOM05D007280 ORTHO05D009108 4.4e-29 133.7 249 35.7
QL11p025101 Quercus lobata HOM05D007280 ORTHO05D009108 2.3e-25 121.3 128 49.2
Ciclev10006779m.g Citrus clementina HOM05D007280 ORTHO05D009108 2.8e-23 114.4 105 58.1
QL11p025168 Quercus lobata HOM05D007280 ORTHO05D009108 6.4e-20 103.2 97 50.5
RcHm_v2.0_Chr4g0445881 Rosa chinensis HOM05D007280 ORTHO05D009108 2.2e-12 78.2 92 50.0
ECA234G4111 Erigeron canadensis HOM05D007280 ORTHO05D009108 4.8e-07 60.5 53 56.6


User provided reference genes

Program Settings