Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3419 Ceratophyllum demersum HOM05D001891 ORTHO05D004048 7.7e-65 250.4 130 100.0
CDE04G1330 Ceratophyllum demersum HOM05D001891 ORTHO05D004048 1.1e-21 107.1 133 51.1
CDE07G1567 Ceratophyllum demersum HOM05D001891 ORTHO05D004048 5.2e-21 104.8 131 51.1
MBI06_g15670_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D004048 1.7e-19 99.8 120 47.5
TAR629G0018 Trochodendron aralioides HOM05D001891 ORTHO05D004048 6.4e-19 97.8 130 48.5
Actinidia00164 Actinidia chinensis HOM05D001891 ORTHO05D004048 2.3e-16 89.4 122 42.6
Dinv02385 Davidia involucrata HOM05D001891 ORTHO05D004048 6.6e-16 87.8 122 42.6
ATR0618G228 Amborella trichopoda HOM05D001891 ORTHO05D004048 3.1e-13 79.0 126 37.3
HPP92_009055 Vanilla planifolia HOM05D001891 ORTHO05D004048 1.5e-12 76.6 120 41.7
Lj3A852T54 Lonicera japonica HOM05D001891 ORTHO05D004048 4.4e-12 75.1 122 41.0
Eucgr.K00861 Eucalyptus grandis HOM05D001891 ORTHO05D004048 2.2e-11 72.8 120 41.7
PGR142G0845 Punica granatum HOM05D001891 ORTHO05D004048 2.9e-11 72.4 121 40.5
Migut.M00394 Erythranthe guttata HOM05D001891 ORTHO05D004048 2.4e-10 69.3 131 37.4
CiPaw.04G117900 Carya illinoinensis HOM05D001891 ORTHO05D004048 3.2e-10 68.9 131 37.4
Nn1g06995 Nelumbo nucifera HOM05D001891 ORTHO05D004048 4.2e-10 68.6 120 36.7
Prupe.3G220500 Prunus persica HOM05D001891 ORTHO05D004048 7.1e-10 67.8 120 38.3
CsaV3_2G035190 Cucumis sativus L. HOM05D001891 ORTHO05D004048 9.3e-10 67.4 122 40.2
arahy.Tifrunner.gnm1.ann1.6C63SS Arachis hypogaea HOM05D001891 ORTHO05D004048 1.2e-09 67.0 123 35.8
arahy.Tifrunner.gnm1.ann1.MDYX4P Arachis hypogaea HOM05D001891 ORTHO05D004048 1.2e-09 67.0 123 35.8
CsaV3_7G003770 Cucumis sativus L. HOM05D001891 ORTHO05D004048 1.2e-09 67.0 120 40.8
MELO3C018802.2 Cucumis melo HOM05D001891 ORTHO05D004048 2.1e-09 66.2 120 35.8
MD17G1092700 Malus domestica HOM05D001891 ORTHO05D004048 2.1e-09 66.2 124 37.9
MD09G1105000 Malus domestica HOM05D001891 ORTHO05D004048 2.7e-09 65.9 124 37.9
Manes.12G078400 Manihot esculenta HOM05D001891 ORTHO05D004048 2.7e-09 65.9 122 36.9
CANSAT64G0421 Cannabis sativa HOM05D001891 ORTHO05D004048 3.5e-09 65.5 122 37.7
Aa31LG8G8420 Aethionema arabicum HOM05D001891 ORTHO05D004048 4.6e-09 65.1 120 38.3
CSS0049956 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D004048 4.6e-09 65.1 121 38.8
TPR.G4167 Trifolium pratense HOM05D001891 ORTHO05D004048 6.0e-09 64.7 137 35.0
CiPaw.03G163000 Carya illinoinensis HOM05D001891 ORTHO05D004048 7.8e-09 64.3 123 39.8
Lalb_Chr01g0005561 Lupinus albus HOM05D001891 ORTHO05D004048 7.8e-09 64.3 119 35.3
Sed0013568 Sechium edule HOM05D001891 ORTHO05D004048 7.8e-09 64.3 121 37.2
TAR629G3333 Trochodendron aralioides HOM05D001891 ORTHO05D004048 7.8e-09 64.3 120 35.8
GSVIVG01030625001 Vitis vinifera HOM05D001891 ORTHO05D004048 1.3e-08 63.5 120 35.8
ClCG02G008440 Citrullus lanatus HOM05D001891 ORTHO05D004048 1.7e-08 63.2 121 35.5
Mapoly0037s0074 Marchantia polymorpha HOM05D001891 ORTHO05D004048 1.7e-08 63.2 121 35.5
ClCG02G001770 Citrullus lanatus HOM05D001891 ORTHO05D004048 3.0e-08 62.4 120 33.3
Psat5g265320 Pisum sativum HOM05D001891 ORTHO05D004048 3.0e-08 62.4 137 34.3
THA.LOC104802537 Tarenaya hassleriana HOM05D001891 ORTHO05D004048 3.0e-08 62.4 121 37.2
Lj3g0025447 Lotus japonicus HOM05D001891 ORTHO05D004048 3.9e-08 62.0 128 35.9
Potri.017G038800 Populus trichocarpa HOM05D001891 ORTHO05D004048 3.9e-08 62.0 120 35.8
Atru.chr6.3149 Acer truncatum HOM05D001891 ORTHO05D004048 5.1e-08 61.6 121 35.5
arahy.Tifrunner.gnm1.ann1.NX9XDZ Arachis hypogaea HOM05D001891 ORTHO05D004048 5.1e-08 61.6 124 35.5
Cc05_g05140 Coffea canephora HOM05D001891 ORTHO05D004048 5.1e-08 61.6 129 34.9
DCAR_012959 Daucus carota HOM05D001891 ORTHO05D004048 5.1e-08 61.6 115 37.4
Sed0020603 Sechium edule HOM05D001891 ORTHO05D004048 6.6e-08 61.2 122 36.1
SEGI_12996 Sequoiadendron giganteum HOM05D001891 ORTHO05D004048 6.6e-08 61.2 120 30.0
FvH4_6g43550 Fragaria vesca HOM05D001891 ORTHO05D004048 8.7e-08 60.8 120 35.0
FAN14G5299 Fragaria x ananassa HOM05D001891 ORTHO05D005832 8.7e-08 60.8 120 35.0
RcHm_v2.0_Chr2g0160081 Rosa chinensis HOM05D001891 ORTHO05D004048 8.7e-08 60.8 120 34.2
Sabra07G0098300 Salix brachista HOM05D001891 ORTHO05D004048 8.7e-08 60.8 120 35.0
CAN.G921.6 Capsicum annuum HOM05D001891 ORTHO05D004048 1.1e-07 60.5 121 39.7
FAN09G3447 Fragaria x ananassa HOM05D001891 ORTHO05D004048 1.1e-07 60.5 120 34.2
Sc12g0002390 Simmondsia chinensis HOM05D001891 ORTHO05D004048 1.1e-07 60.5 120 35.0
AagrBONN_evm.TU.Sc2ySwM_362.2694 Anthoceros agrestis HOM05D001891 ORTHO05D004048 1.5e-07 60.1 124 32.3
MBI03_g22259_MAGBIO Magnolia biondii HOM05D001891 ORTHO05D004048 1.5e-07 60.1 98 39.8
Nitab4.5_0005894g0030 Nicotiana tabacum HOM05D001891 ORTHO05D009433 1.5e-07 60.1 130 38.5
Os04g0672800 Oryza sativa ssp. japonica HOM05D001891 ORTHO05D004048 1.5e-07 60.1 48 56.2
QL03p043045 Quercus lobata HOM05D001891 ORTHO05D004048 1.5e-07 60.1 58 50.0
vmacro10802 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 1.5e-07 60.1 117 35.0
Ah.01g014600 Amaranthus hybridus HOM05D001891 ORTHO05D004048 1.9e-07 59.7 120 33.3
CSS0024189 Camellia sinensis var. sinensis HOM05D001891 ORTHO05D004048 1.9e-07 59.7 120 34.2
Nitab4.5_0000631g0040 Nicotiana tabacum HOM05D001891 ORTHO05D004048 1.9e-07 59.7 135 35.6
Oeu041959.1 Olea europaea HOM05D001891 ORTHO05D004048 1.9e-07 59.7 126 38.9
Peaxi162Scf00007g01230 Petunia axillaris HOM05D001891 ORTHO05D004048 1.9e-07 59.7 120 37.5
FAN02G0497 Fragaria x ananassa HOM05D001891 ORTHO05D005832 2.5e-07 59.3 120 34.2
Glyma.12G195800 Glycine max HOM05D001891 ORTHO05D004048 2.5e-07 59.3 126 33.3
SMO356G0403 Selaginella moellendorffii HOM05D001891 ORTHO05D004048 2.5e-07 59.3 110 35.5
Lj3g0010899 Lotus japonicus HOM05D001891 ORTHO05D004048 3.3e-07 58.9 129 37.2
Potri.007G121600 Populus trichocarpa HOM05D001891 ORTHO05D004048 3.3e-07 58.9 120 35.8
QL08p033836 Quercus lobata HOM05D001891 ORTHO05D004048 3.3e-07 58.9 120 34.2
Sp3g19830 Schrenkiella parvula HOM05D001891 ORTHO05D004048 3.3e-07 58.9 123 37.4
VMungo1080G1612 Vigna mungo HOM05D001891 ORTHO05D004048 3.3e-07 58.9 122 36.9
MSTRG.12288 Avicennia marina HOM05D001891 ORTHO05D004048 4.3e-07 58.5 135 35.6
Ciclev10016204m.g Citrus clementina HOM05D001891 ORTHO05D004048 4.3e-07 58.5 120 34.2
Dinv18531 Davidia involucrata HOM05D001891 ORTHO05D004048 4.3e-07 58.5 120 35.0
Nitab4.5_0001176g0130 Nicotiana tabacum HOM05D001891 ORTHO05D009433 4.3e-07 58.5 130 38.5
Nitab4.5_0006207g0030 Nicotiana tabacum HOM05D001891 ORTHO05D004048 4.3e-07 58.5 132 36.4
Thecc.02G162400 Theobroma cacao HOM05D001891 ORTHO05D004048 4.3e-07 58.5 122 36.9
C05p41520 Brassica napus HOM05D001891 ORTHO05D004048 5.6e-07 58.2 122 36.9
BolC5t32890H Brassica oleracea HOM05D001891 ORTHO05D004048 5.6e-07 58.2 122 36.9
Ca_27743_v3 Cicer arietinum L. HOM05D001891 ORTHO05D004048 5.6e-07 58.2 137 31.4
Sopen07g026210 Solanum pennellii HOM05D001891 ORTHO05D004048 5.6e-07 58.2 136 39.0
DCAR_019211 Daucus carota HOM05D001891 ORTHO05D004048 7.3e-07 57.8 118 38.1
Dinv39686 Davidia involucrata HOM05D001891 ORTHO05D004048 7.3e-07 57.8 120 33.3
Zm00001eb066610 Zea mays HOM05D001891 ORTHO05D004048 7.3e-07 57.8 47 55.3
BcaC01g03476 Brassica carinata HOM05D001891 ORTHO05D004048 9.6e-07 57.4 123 32.5
C03p52060 Brassica napus HOM05D001891 ORTHO05D004048 9.6e-07 57.4 123 32.5
BolC3t17487H Brassica oleracea HOM05D001891 ORTHO05D004048 9.6e-07 57.4 123 32.5
Glyma.13G306700 Glycine max HOM05D001891 ORTHO05D004048 9.6e-07 57.4 122 35.2
HanXRQChr17g0560941 Helianthus annuus HOM05D001891 ORTHO05D004048 9.6e-07 57.4 120 35.0
A05p26910 Brassica napus HOM05D001891 ORTHO05D004048 1.3e-06 57.0 122 36.9
BraA05t21571Z Brassica rapa HOM05D001891 ORTHO05D004048 1.3e-06 57.0 122 36.9
Duzib052G0734 Durio zibethinus HOM05D001891 ORTHO05D004048 1.3e-06 57.0 120 34.2
Gohir.A03G163600 Gossypium hirsutum HOM05D001891 ORTHO05D004048 1.3e-06 57.0 120 34.2
Gorai.008G149900 Gossypium raimondii HOM05D001891 ORTHO05D004048 1.3e-06 57.0 120 33.3
Lsat_1_v5_gn_3_43721 Lactuca sativa HOM05D001891 ORTHO05D004048 1.3e-06 57.0 120 35.0
PSO675G1171 Papaver somniferum HOM05D001891 ORTHO05D004048 1.3e-06 57.0 120 34.2
SGA_v2.0_scaffold49G18333 Striga asiatica HOM05D001891 ORTHO05D004048 1.3e-06 57.0 121 36.4
BraA03t13403Z Brassica rapa HOM05D001891 ORTHO05D004048 1.6e-06 56.6 129 34.9
Gohir.D12G138400 Gossypium hirsutum HOM05D001891 ORTHO05D004048 1.6e-06 56.6 120 35.8
Hma1.2p1_0613F.1_g189170 Hydrangea macrophylla HOM05D001891 ORTHO05D004048 1.6e-06 56.6 120 33.3
Lalb_Chr03g0028901 Lupinus albus HOM05D001891 ORTHO05D004048 1.6e-06 56.6 119 33.6
PSO541G4560 Papaver somniferum HOM05D001891 ORTHO05D004048 1.6e-06 56.6 120 34.2
Solyc07g052600.3 Solanum lycopersicum HOM05D001891 ORTHO05D004048 1.6e-06 56.6 133 33.8
TAR627G0099 Trochodendron aralioides HOM05D001891 ORTHO05D004048 1.6e-06 56.6 97 41.2
A03p42500 Brassica napus HOM05D001891 ORTHO05D004048 2.1e-06 56.2 126 34.9
Gorai.005G209300 Gossypium raimondii HOM05D001891 ORTHO05D004048 2.1e-06 56.2 120 34.2
Oeu011080.1 Olea europaea HOM05D001891 ORTHO05D004048 2.1e-06 56.2 99 42.4
TWI75G1691 Tripterygium wilfordii HOM05D001891 ORTHO05D004048 2.1e-06 56.2 120 31.7
vmacro09324 Vaccinium macrocarpon HOM05D001891 ORTHO05D004048 2.1e-06 56.2 122 34.4
Actinidia30510 Actinidia chinensis HOM05D001891 ORTHO05D004048 2.8e-06 55.8 121 35.5
AUR62037141 Chenopodium quinoa HOM05D001891 ORTHO05D004048 2.8e-06 55.8 121 34.7
Thhalv10021287m.g Eutrema salsugineum HOM05D001891 ORTHO05D004048 2.8e-06 55.8 120 32.5
BcaB06g26288 Brassica carinata HOM05D001891 ORTHO05D004048 3.6e-06 55.5 122 36.1
Sabra17G0025800 Salix brachista HOM05D001891 ORTHO05D004048 3.6e-06 55.5 120 35.0
AT3G21865 Arabidopsis thaliana HOM05D001891 ORTHO05D004048 4.8e-06 55.1 125 37.6
Lsat_1_v5_gn_8_129400 Lactuca sativa HOM05D001891 ORTHO05D004048 4.8e-06 55.1 120 37.5
Sed0022558 Sechium edule HOM05D001891 ORTHO05D004048 4.8e-06 55.1 125 36.8
CARHR097820 Cardamine hirsuta HOM05D001891 ORTHO05D004048 6.2e-06 54.7 124 36.3
AUR62025059 Chenopodium quinoa HOM05D001891 ORTHO05D004048 6.2e-06 54.7 121 33.1
COL.COLO4_12984 Corchorus olitorius HOM05D001891 ORTHO05D005832 6.2e-06 54.7 120 34.2
Migut.H01220 Erythranthe guttata HOM05D001891 ORTHO05D004048 6.2e-06 54.7 120 35.8
Gohir.D02G187000 Gossypium hirsutum HOM05D001891 ORTHO05D004048 6.2e-06 54.7 120 33.3
Oeu052537.1 Olea europaea HOM05D001891 ORTHO05D004048 6.2e-06 54.7 131 33.6
Cpa.g.sc8.236 Carica papaya HOM05D001891 ORTHO05D004048 8.1e-06 54.3 97 40.2


User provided reference genes

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