Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.3e-102 375.6 186 100.0
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.7e-36 156.8 323 34.7
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.2e-34 150.6 256 38.3
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.2e-34 150.6 289 35.6
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 2.2e-33 146.4 288 35.4
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 3.8e-33 145.6 283 34.6
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.9e-32 143.3 256 36.7
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 9.4e-32 141.0 220 40.5
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.1e-31 139.8 291 35.7
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 6.1e-31 138.3 324 31.5
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 8.8e-30 134.4 220 39.1
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 1.2e-29 134.0 328 30.8
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 2.6e-29 132.9 120 53.3
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 3.4e-29 132.5 323 31.9
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 4.4e-29 132.1 202 38.1
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 9.8e-29 131.0 320 31.2
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 9.8e-29 131.0 202 38.1
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 1.3e-28 130.6 200 40.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.3e-28 130.6 200 40.0
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 2.2e-28 129.8 336 30.4
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 2.2e-28 129.8 324 30.9
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 2.8e-28 129.4 262 34.7
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 3.7e-28 129.0 202 40.6
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 4.8e-28 128.6 203 38.9
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 6.3e-28 128.3 327 30.6
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 8.3e-28 127.9 150 44.0
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.4e-27 127.1 124 51.6
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 1.4e-27 127.1 322 30.4
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 1.8e-27 126.7 325 29.8
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 2.4e-27 126.3 315 29.5
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 4.1e-27 125.6 320 30.0
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 7.0e-27 124.8 345 29.6
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 9.1e-27 124.4 201 36.3
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.2e-26 124.0 307 31.3
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 1.6e-26 123.6 342 29.2
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 1.6e-26 123.6 306 30.7
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 1.6e-26 123.6 325 29.5
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 2.0e-26 123.2 201 36.8
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 2.7e-26 122.9 208 36.1
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 3.5e-26 122.5 325 29.2
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 4.5e-26 122.1 204 36.8
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 4.5e-26 122.1 332 29.5
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 4.5e-26 122.1 201 36.3
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 4.5e-26 122.1 324 29.3
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 7.7e-26 121.3 330 29.4
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 1.0e-25 120.9 315 29.8
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.0e-25 120.9 324 29.6
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.3e-25 120.6 205 35.6
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 1.3e-25 120.6 204 36.8
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 1.3e-25 120.6 196 37.2
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.7e-25 120.2 316 30.1
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.7e-25 120.2 321 30.5
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 2.3e-25 119.8 317 29.7
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 5.0e-25 118.6 329 28.9
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 5.0e-25 118.6 320 29.7
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 6.6e-25 118.2 336 28.3
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 6.6e-25 118.2 326 29.4
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 4.2e-24 115.5 300 30.3
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 4.2e-24 115.5 365 26.3
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 5.5e-24 115.2 322 28.9
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 9.5e-24 114.4 324 29.3
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 1.2e-23 114.0 324 28.4
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 1.6e-23 113.6 331 27.5
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 2.1e-23 113.2 288 29.9
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 3.6e-23 112.5 301 29.6
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 6.1e-23 111.7 315 30.8
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 6.1e-23 111.7 185 37.8
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 1.8e-22 110.2 325 28.6
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.3e-22 109.8 325 29.2
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 4.0e-22 109.0 304 28.6
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 6.8e-22 108.2 201 32.8
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 6.8e-22 108.2 182 34.6
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 6.8e-22 108.2 325 27.7
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.2e-21 107.5 290 28.6
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 2.0e-21 106.7 325 27.7
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 2.6e-21 106.3 199 33.7
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 7.5e-21 104.8 320 27.8
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 1.7e-20 103.6 322 27.3
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.7e-20 103.6 204 32.4
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 6.3e-20 101.7 101 54.5
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 7.0e-19 98.2 100 48.0
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 1.2e-18 97.4 316 25.6
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.6e-18 97.1 322 25.8
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 2.0e-18 96.7 322 25.8
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 2.7e-18 96.3 323 25.7
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.7e-18 96.3 322 25.8
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 2.7e-18 96.3 323 25.7
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 1.3e-17 94.0 337 26.1
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 5.6e-16 88.6 218 28.4
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.3e-14 83.2 201 29.4
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 3.1e-14 82.8 96 45.8
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 4.0e-14 82.4 98 42.9
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.2e-14 82.0 98 42.9
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 6.8e-14 81.6 94 45.7
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.2e-13 80.9 45 95.6
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 1.2e-13 80.9 84 45.2
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.5e-13 80.5 98 41.8
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.6e-13 79.7 108 41.7
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.7e-12 77.0 231 26.4
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.9e-12 75.5 121 38.8
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.4e-11 73.9 342 24.3
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 4.6e-10 68.9 69 47.8
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 6.0e-10 68.6 78 42.3
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 2.3e-09 66.6 150 32.7
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 8.6e-09 64.7 53 56.6
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 1.1e-08 64.3 74 39.2
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.4e-06 57.4 161 28.0
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 4.0e-06 55.8 42 57.1


User provided reference genes

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