Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G3002 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 2.4e-69 265.4 135 100.0
TAR267G0001 Trochodendron aralioides HOM05D005727 ORTHO05D007324 2.0e-52 209.1 132 79.5
Nn2g10300 Nelumbo nucifera HOM05D005727 ORTHO05D007324 3.5e-52 208.4 132 78.8
TAR636G3506 Trochodendron aralioides HOM05D005727 ORTHO05D007324 7.8e-52 207.2 132 78.8
Aqoxy4G02424 Aquilegia oxysepala HOM05D005727 ORTHO05D007324 4.7e-49 198.0 126 80.2
Dinv16978 Davidia involucrata HOM05D005727 ORTHO05D007324 2.0e-47 192.6 134 73.1
Potri.016G136600 Populus trichocarpa HOM05D005727 ORTHO05D007324 2.2e-46 189.1 132 74.2
MD12G1188200 Malus domestica HOM05D005727 ORTHO05D007324 2.9e-46 188.7 138 71.7
Sabra04G0153300 Salix brachista HOM05D005727 ORTHO05D007324 6.4e-46 187.6 132 73.5
FAN14G2915 Fragaria x ananassa HOM05D005727 ORTHO05D007324 8.3e-46 187.2 135 71.9
FvH4_6g09890 Fragaria vesca HOM05D005727 ORTHO05D007324 1.1e-45 186.8 115 78.3
FAN05G4930 Fragaria x ananassa HOM05D005727 ORTHO05D007324 4.1e-45 184.9 138 70.3
FAN09G3145 Fragaria x ananassa HOM05D005727 ORTHO05D007324 2.1e-44 182.6 138 69.6
vmacro08938 Vaccinium macrocarpon HOM05D005727 ORTHO05D007324 3.5e-44 181.8 124 74.2
RcHm_v2.0_Chr3g0460491 Rosa chinensis HOM05D005727 ORTHO05D007324 6.0e-44 181.0 115 76.5
CSS0016709 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 1.0e-43 180.3 123 73.2
Duzib268G0979 Durio zibethinus HOM05D005727 ORTHO05D007324 1.0e-43 180.3 116 76.7
GSVIVG01030181001 Vitis vinifera HOM05D005727 ORTHO05D007324 1.3e-43 179.9 129 69.0
Thecc.04G151700 Theobroma cacao HOM05D005727 ORTHO05D007324 6.6e-43 177.6 125 72.8
Cpa.g.sc86.59 Carica papaya HOM05D005727 ORTHO05D007324 8.6e-43 177.2 109 77.1
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 8.6e-43 177.2 123 71.5
CiPaw.09G221300 Carya illinoinensis HOM05D005727 ORTHO05D007324 1.5e-42 176.4 131 67.2
Cc06_g00400 Coffea canephora HOM05D005727 ORTHO05D007324 1.5e-42 176.4 132 68.2
COL.COLO4_06480 Corchorus olitorius HOM05D005727 ORTHO05D007324 1.9e-42 176.0 134 69.4
Gohir.D09G215000 Gossypium hirsutum HOM05D005727 ORTHO05D007324 1.9e-42 176.0 134 67.2
Gorai.006G235400 Gossypium raimondii HOM05D005727 ORTHO05D007324 1.9e-42 176.0 134 67.2
Actinidia32567 Actinidia chinensis HOM05D005727 ORTHO05D007324 2.5e-42 175.6 127 70.1
Gohir.A09G213660 Gossypium hirsutum HOM05D005727 ORTHO05D007324 2.5e-42 175.6 134 67.2
AUR62006416 Chenopodium quinoa HOM05D005727 ORTHO05D007324 3.3e-42 175.3 131 69.5
PGR031G0696 Punica granatum HOM05D005727 ORTHO05D007324 3.3e-42 175.3 118 73.7
FAN05G2443 Fragaria x ananassa HOM05D005727 ORTHO05D007324 9.5e-42 173.7 156 62.2
Atru.chr8.117 Acer truncatum HOM05D005727 ORTHO05D007324 2.1e-41 172.6 136 66.9
TWI53G1599 Tripterygium wilfordii HOM05D005727 ORTHO05D007324 2.1e-41 172.6 134 69.4
AUR62029764 Chenopodium quinoa HOM05D005727 ORTHO05D007324 3.6e-41 171.8 131 67.9
QL07p032118 Quercus lobata HOM05D005727 ORTHO05D007324 3.6e-41 171.8 143 65.7
Actinidia20792 Actinidia chinensis HOM05D005727 ORTHO05D007324 4.7e-41 171.4 113 73.5
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 4.7e-41 171.4 132 68.9
CAN.G487.5 Capsicum annuum HOM05D005727 ORTHO05D007324 4.7e-41 171.4 128 70.3
DCAR_023975 Daucus carota HOM05D005727 ORTHO05D007324 8.1e-41 170.6 115 76.5
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 8.1e-41 170.6 137 70.1
Hund19761 Selenicereus undatus HOM05D005727 ORTHO05D007324 8.1e-41 170.6 132 68.9
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 1.1e-40 170.2 132 68.2
FAN05G2146 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.1e-40 170.2 159 60.4
Sed0002775 Sechium edule HOM05D005727 ORTHO05D007324 1.1e-40 170.2 123 70.7
Aa31LG5G11490 Aethionema arabicum HOM05D005727 ORTHO05D007324 1.4e-40 169.9 140 66.4
HPP92_018087 Vanilla planifolia HOM05D005727 ORTHO05D007324 4.0e-40 168.3 136 66.2
ATR1127G235 Amborella trichopoda HOM05D005727 ORTHO05D007324 5.2e-40 167.9 87 92.0
Thhalv10014581m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 5.2e-40 167.9 120 69.2
PSO170G4055 Papaver somniferum HOM05D005727 ORTHO05D007324 5.2e-40 167.9 142 64.1
arahy.Tifrunner.gnm1.ann1.CT9SCB Arachis hypogaea HOM05D005727 ORTHO05D007324 8.9e-40 167.2 125 68.0
arahy.Tifrunner.gnm1.ann1.FBM6UZ Arachis hypogaea HOM05D005727 ORTHO05D007324 8.9e-40 167.2 125 68.0
Cfa017035 Carpinus fangiana HOM05D005727 ORTHO05D007324 8.9e-40 167.2 140 63.6
Sc02g0000150 Simmondsia chinensis HOM05D005727 ORTHO05D007324 1.2e-39 166.8 132 66.7
PGSC0003DMG400031234 Solanum tuberosum HOM05D005727 ORTHO05D007324 1.2e-39 166.8 134 67.9
Lalb_Chr01g0023751 Lupinus albus HOM05D005727 ORTHO05D007324 1.5e-39 166.4 134 69.4
PSO017G0584 Papaver somniferum HOM05D005727 ORTHO05D007324 1.5e-39 166.4 133 66.9
CANSAT35G1579 Cannabis sativa HOM05D005727 ORTHO05D007324 2.0e-39 166.0 127 66.9
Sopen10g027500 Solanum pennellii HOM05D005727 ORTHO05D007324 2.0e-39 166.0 134 67.9
HanXRQChr11g0345321 Helianthus annuus HOM05D005727 ORTHO05D007324 4.4e-39 164.9 116 69.8
Lj1g0000237 Lotus japonicus HOM05D005727 ORTHO05D007324 4.4e-39 164.9 135 65.9
Ciclev10012658m.g Citrus clementina HOM05D005727 ORTHO05D007324 7.6e-39 164.1 126 69.0
Haze_21174 Corylus avellana HOM05D005727 ORTHO05D007324 7.6e-39 164.1 140 62.9
ECA248G0208 Erigeron canadensis HOM05D005727 ORTHO05D007324 9.9e-39 163.7 114 68.4
CsaV3_3G033100 Cucumis sativus L. HOM05D005727 ORTHO05D007324 1.3e-38 163.3 138 65.9
Lsat_1_v5_gn_5_152381 Lactuca sativa HOM05D005727 ORTHO05D007324 2.2e-38 162.5 115 68.7
MELO3C009104.2 Cucumis melo HOM05D005727 ORTHO05D007324 3.8e-38 161.8 115 71.3
HanXRQChr01g0000121 Helianthus annuus HOM05D005727 ORTHO05D007324 4.9e-38 161.4 114 70.2
THA.LOC104823320 Tarenaya hassleriana HOM05D005727 ORTHO05D007324 4.9e-38 161.4 135 65.9
Glyma.18G213900 Glycine max HOM05D005727 ORTHO05D007324 6.4e-38 161.0 134 64.2
SalBow8G0913 Salvia bowleyana HOM05D005727 ORTHO05D007324 8.4e-38 160.6 122 70.5
Os12g0115900 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 1.1e-37 160.2 132 65.9
Os11g0116400 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 1.4e-37 159.8 132 65.2
Eucgr.A00739 Eucalyptus grandis HOM05D005727 ORTHO05D007324 2.4e-37 159.1 140 61.4
Oeu057982.1 Olea europaea HOM05D005727 ORTHO05D007324 2.4e-37 159.1 120 68.3
Phvul.008G082900 Phaseolus vulgaris HOM05D005727 ORTHO05D007324 2.4e-37 159.1 128 67.2
Solyc10g075020.3 Solanum lycopersicum HOM05D005727 ORTHO05D007324 3.2e-37 158.7 134 66.4
Psat3g118920 Pisum sativum HOM05D005727 ORTHO05D007324 5.4e-37 157.9 138 64.5
Glyma.09G275000 Glycine max HOM05D005727 ORTHO05D007324 7.1e-37 157.5 139 61.2
Sp3g07170 Schrenkiella parvula HOM05D005727 ORTHO05D007324 9.2e-37 157.1 125 65.6
VMungo1383G0728 Vigna mungo HOM05D005727 ORTHO05D007324 1.2e-36 156.8 123 65.0
Migut.J00039 Erythranthe guttata HOM05D005727 ORTHO05D007324 1.6e-36 156.4 127 66.1
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 1.6e-36 156.4 126 65.9
BcaNung03307 Brassica carinata HOM05D005727 ORTHO05D007324 2.1e-36 156.0 124 65.3
AL3G19740 Arabidopsis lyrata HOM05D005727 ORTHO05D007324 2.7e-36 155.6 124 66.1
A05p40060 Brassica napus HOM05D005727 ORTHO05D007324 2.7e-36 155.6 139 63.3
BolC5t34584H Brassica oleracea HOM05D005727 ORTHO05D007324 2.7e-36 155.6 139 63.3
CARHR083040 Cardamine hirsuta HOM05D005727 ORTHO05D007324 2.7e-36 155.6 131 64.9
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 2.7e-36 155.6 139 62.6
BcaC05g29610 Brassica carinata HOM05D005727 ORTHO05D007324 3.5e-36 155.2 139 62.6
BcaNung03303 Brassica carinata HOM05D005727 ORTHO05D007324 3.5e-36 155.2 90 80.0
C05p59120 Brassica napus HOM05D005727 ORTHO05D007324 3.5e-36 155.2 139 62.6
CSS0006704 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 3.5e-36 155.2 113 69.0
AT3G08740 Arabidopsis thaliana HOM05D005727 ORTHO05D007324 4.6e-36 154.8 137 62.8
C09p74740 Brassica napus HOM05D005727 ORTHO05D007324 1.0e-35 153.7 87 81.6
BolC3t14633H Brassica oleracea HOM05D005727 ORTHO05D007324 1.0e-35 153.7 87 81.6
A10p33800 Brassica napus HOM05D005727 ORTHO05D007324 1.7e-35 152.9 87 81.6
BraA10t45408Z Brassica rapa HOM05D005727 ORTHO05D007324 2.3e-35 152.5 87 80.5
Peaxi162Scf01238g00221 Petunia axillaris HOM05D005727 ORTHO05D007324 2.3e-35 152.5 158 58.2
unitig_578.g15912 Utricularia gibba HOM05D005727 ORTHO05D007324 2.3e-35 152.5 125 64.0
Carub.0003s0787 Capsella rubella HOM05D005727 ORTHO05D007324 3.0e-35 152.1 126 65.9
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 3.0e-35 152.1 91 78.0
BcaC06g31951 Brassica carinata HOM05D005727 ORTHO05D007324 8.6e-35 150.6 133 60.2
Rhsim04G0121700 Rhododendron simsii HOM05D005727 ORTHO05D007324 1.1e-34 150.2 173 50.3
SalBow1G7101 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.2e-33 146.7 154 55.8
Prupe.6G293500 Prunus persica HOM05D005727 ORTHO05D007324 2.1e-33 146.0 114 69.3
Thhalv10023841m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 3.6e-33 145.2 133 57.9
Sp6g41120 Schrenkiella parvula HOM05D005727 ORTHO05D007324 3.6e-33 145.2 155 54.8
AagrBONN_evm.TU.Sc2ySwM_228.1047 Anthoceros agrestis HOM05D005727 ORTHO05D007324 8.1e-33 144.1 87 72.4
Thhalv10022392m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 1.8e-32 142.9 130 57.7
MSTRG.5500 Avicennia marina HOM05D005727 ORTHO05D007324 8.9e-32 140.6 86 75.6
SalBow1G5580 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.2e-31 140.2 109 66.1
BcaC01g05776 Brassica carinata HOM05D005727 ORTHO05D007324 3.4e-31 138.7 85 78.8
Pp3c23_18430 Physcomitrium patens HOM05D005727 ORTHO05D007324 5.8e-31 137.9 88 70.5
Lj3A941T101 Lonicera japonica HOM05D005727 ORTHO05D007324 2.9e-30 135.6 108 66.7
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 1.1e-29 133.7 84 67.9
Aa31LG5G18760 Aethionema arabicum HOM05D005727 ORTHO05D007324 1.9e-29 132.9 135 58.5
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 2.4e-29 132.5 85 68.2
Mapoly0080s0087 Marchantia polymorpha HOM05D005727 ORTHO05D007324 9.3e-29 130.6 104 60.6
Zm00001eb406060 Zea mays HOM05D005727 ORTHO05D007324 3.3e-26 122.1 77 77.9
MCO07G614 Micromonas commoda HOM05D005727 ORTHO05D007324 3.6e-25 118.6 83 62.7
Cre16.g691000 Chlamydomonas reinhardtii HOM05D005727 ORTHO05D007324 2.6e-23 112.5 110 50.9
SalBow5G2514 Salvia bowleyana HOM05D005727 ORTHO05D007324 4.5e-23 111.7 62 85.5
SGA_v2.0_scaffold85G26621 Striga asiatica HOM05D005727 ORTHO05D007324 4.5e-23 111.7 66 78.8
MD04G1174600 Malus domestica HOM05D005727 ORTHO05D007324 7.6e-23 110.9 68 75.0
SEGI_29867 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 1.0e-11 73.9 41 80.5
PRCOL_00007056 Prasinoderma coloniale HOM05D005727 ORTHO05D007324 2.8e-09 65.9 39 74.4


User provided reference genes

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