Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 4.0e-180 634.8 356 100.0
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 5.7e-70 268.9 322 48.8
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 4.0e-63 246.1 289 48.1
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 2.6e-62 243.4 309 46.6
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.1e-60 238.0 312 44.6
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.1e-60 238.0 312 44.6
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.0e-60 235.3 306 46.1
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 6.0e-59 232.3 298 44.3
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.3e-58 231.1 308 45.5
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.7e-58 230.7 301 43.9
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.9e-58 229.6 290 46.2
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 3.9e-58 229.6 306 44.8
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 7.3e-57 225.3 307 44.0
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 7.3e-57 225.3 310 44.2
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 9.5e-57 224.9 319 45.5
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 9.5e-57 224.9 301 44.9
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.8e-56 223.4 230 49.6
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.1e-55 221.5 300 45.0
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.1e-55 221.5 306 43.5
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.8e-55 220.7 308 43.5
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.8e-55 220.7 307 43.6
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 3.1e-55 219.9 304 44.4
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 3.1e-55 219.9 304 44.4
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.0e-55 219.5 223 51.6
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.0e-55 219.5 306 45.4
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.2e-55 219.2 307 42.7
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 1.2e-54 218.0 301 44.9
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 1.2e-54 218.0 309 43.7
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 2.6e-54 216.9 307 42.3
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 3.4e-54 216.5 184 57.1
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 3.4e-54 216.5 307 43.0
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 3.4e-54 216.5 305 42.0
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.4e-54 216.5 307 44.6
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 4.4e-54 216.1 184 57.1
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 9.8e-54 214.9 223 50.7
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 9.8e-54 214.9 223 50.7
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.3e-53 214.5 307 41.7
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.7e-53 214.2 309 42.7
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.7e-53 214.2 307 42.0
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.9e-53 213.4 301 43.2
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 4.9e-53 212.6 308 45.1
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 4.9e-53 212.6 300 42.7
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.1e-52 211.5 300 41.0
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 3.2e-52 209.9 313 43.1
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 4.1e-52 209.5 306 43.5
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.7e-51 206.8 309 42.1
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.5e-51 206.5 310 41.3
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 4.6e-51 206.1 301 42.5
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 6.0e-51 205.7 195 55.4
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 7.8e-51 205.3 305 42.3
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.0e-50 204.9 293 44.4
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.3e-50 204.5 306 41.8
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 2.3e-50 203.8 332 41.0
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 2.3e-50 203.8 306 41.8
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 3.0e-50 203.4 185 56.8
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 3.9e-50 203.0 306 42.2
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 6.6e-50 202.2 190 56.3
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 8.6e-50 201.8 316 40.8
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 5.6e-49 199.1 312 42.6
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 9.5e-49 198.4 192 54.2
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.8e-48 196.8 319 40.8
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 8.1e-48 195.3 304 40.5
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 8.1e-48 195.3 317 39.7
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.4e-47 194.5 301 39.9
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 2.3e-47 193.7 298 41.3
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 3.1e-47 193.4 302 43.4
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 4.0e-47 193.0 306 40.8
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 5.2e-47 192.6 306 41.5
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 5.2e-47 192.6 194 53.6
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 6.8e-47 192.2 299 41.1
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 1.2e-46 191.4 186 53.8
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 3.4e-46 189.9 233 46.4
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 3.4e-46 189.9 186 54.3
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 5.8e-46 189.1 319 39.2
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 5.8e-46 189.1 303 41.3
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 9.9e-46 188.3 251 43.8
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 9.9e-46 188.3 325 38.5
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.3e-45 188.0 304 40.5
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 2.2e-45 187.2 302 39.4
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 2.2e-45 187.2 195 50.3
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 4.9e-45 186.0 352 38.1
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 8.4e-45 185.3 305 39.0
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 8.4e-45 185.3 183 51.9
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.4e-44 184.5 193 50.3
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 3.2e-44 183.3 334 39.5
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 7.1e-44 182.2 354 36.2
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 2.1e-43 180.6 185 50.8
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 3.9e-42 176.4 228 46.5
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.5e-41 173.7 180 50.6
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 3.6e-40 169.9 184 47.3
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 6.2e-40 169.1 299 37.5
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 6.2e-40 169.1 299 37.5
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 6.8e-39 165.6 296 38.2
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 6.8e-39 165.6 296 38.2
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 6.8e-39 165.6 296 38.2
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.6e-38 163.7 303 37.0
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.9e-37 160.2 187 48.1
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 1.4e-36 157.9 208 46.2
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.9e-36 157.5 261 40.2
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.9e-36 157.5 196 44.9
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 4.2e-36 156.4 287 37.6
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 4.6e-35 152.9 127 59.8
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 7.8e-35 152.1 168 52.4
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.0e-34 151.8 145 54.5
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.3e-34 150.6 189 46.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 5.6e-33 146.0 282 37.2
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 3.8e-29 133.3 226 38.1
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 6.0e-27 125.9 228 38.6
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 4.0e-23 113.2 84 64.3
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 9.0e-23 112.1 245 30.6
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 5.5e-20 102.8 80 66.2
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 2.5e-17 94.0 222 33.8
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 9.6e-09 65.5 86 39.5


User provided reference genes

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