Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 8.7e-152 540.4 303 100.0
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.9e-131 472.2 302 90.4
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 4.0e-72 275.8 305 59.0
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 1.3e-67 260.8 302 57.0
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.3e-66 256.1 307 55.4
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 2.8e-65 253.1 300 58.0
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 3.4e-63 246.1 273 61.5
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 5.8e-63 245.4 308 57.1
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 3.8e-62 242.7 299 55.5
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 2.7e-60 236.5 183 68.9
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 3.5e-60 236.1 168 74.4
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 1.0e-59 234.6 295 50.5
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 1.7e-59 233.8 178 70.8
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 2.3e-59 233.4 287 54.7
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 3.0e-59 233.0 177 71.8
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 1.1e-58 231.1 168 73.8
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 2.5e-58 229.9 278 54.0
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 3.3e-58 229.6 178 69.7
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 3.3e-58 229.6 168 73.8
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 5.6e-58 228.8 168 74.4
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 5.6e-58 228.8 170 74.7
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 9.6e-58 228.0 226 63.7
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 9.6e-58 228.0 188 68.1
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 1.2e-57 227.6 188 66.5
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 1.2e-57 227.6 178 69.1
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 1.2e-57 227.6 186 67.2
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 1.2e-57 227.6 231 62.3
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 1.6e-57 227.3 167 73.1
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 2.1e-57 226.9 178 70.2
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 2.1e-57 226.9 178 70.2
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 4.7e-57 225.7 180 67.8
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 3.1e-56 223.0 158 77.2
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 5.2e-56 222.2 178 68.5
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 6.9e-56 221.9 178 67.4
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 6.9e-56 221.9 176 68.8
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 6.9e-56 221.9 165 73.3
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.2e-55 221.1 190 66.3
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.5e-55 220.7 274 51.8
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 1.5e-55 220.7 280 55.4
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 2.0e-55 220.3 172 70.3
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 2.0e-55 220.3 172 70.3
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 5.8e-55 218.8 167 68.9
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 5.8e-55 218.8 224 63.4
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 7.6e-55 218.4 165 69.7
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 9.9e-55 218.0 168 70.2
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 9.9e-55 218.0 192 67.2
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 9.9e-55 218.0 192 67.2
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 2.2e-54 216.9 175 66.3
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 2.9e-54 216.5 164 72.6
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 4.9e-54 215.7 182 63.2
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 6.4e-54 215.3 169 68.6
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 1.9e-53 213.8 209 64.1
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 1.9e-53 213.8 165 68.5
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 1.9e-53 213.8 168 73.2
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 1.9e-53 213.8 168 73.2
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 2.4e-53 213.4 165 67.9
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 3.2e-53 213.0 162 70.4
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.2e-53 212.6 177 65.0
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 7.1e-53 211.8 167 67.1
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 9.3e-53 211.5 177 65.0
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 9.3e-53 211.5 165 67.3
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 1.6e-52 210.7 167 66.5
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 1.6e-52 210.7 167 66.5
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 1.6e-52 210.7 167 66.5
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 1.6e-52 210.7 176 69.3
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.7e-52 209.9 209 62.2
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 3.5e-52 209.5 157 72.0
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 6.0e-52 208.8 168 69.6
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 6.0e-52 208.8 165 68.5
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 1.0e-51 208.0 181 63.5
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.3e-51 207.6 181 67.4
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 1.7e-51 207.2 181 66.9
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 2.3e-51 206.8 158 68.4
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 8.7e-51 204.9 166 69.9
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.9e-50 203.8 214 56.1
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 2.5e-50 203.4 166 69.3
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 7.3e-50 201.8 268 53.7
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 1.6e-49 200.7 170 65.9
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 2.1e-49 200.3 166 65.1
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 4.8e-49 199.1 157 73.2
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 6.2e-49 198.7 179 64.2
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 1.1e-48 198.0 157 67.5
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 1.1e-48 198.0 157 67.5
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 1.4e-48 197.6 207 57.5
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 2.4e-48 196.8 253 51.0
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 2.4e-48 196.8 169 66.3
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 3.1e-48 196.4 163 69.3
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 4.0e-48 196.1 219 60.7
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 6.9e-48 195.3 174 65.5
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 5.8e-47 192.2 214 55.6
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 1.3e-46 191.0 223 52.9
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 2.2e-46 190.3 165 63.6
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 4.9e-46 189.1 162 64.8
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 3.9e-43 179.5 171 59.1
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 1.5e-42 177.6 133 70.7
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.9e-42 177.2 135 73.3
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 4.3e-42 176.0 164 61.6
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 1.1e-40 171.4 124 68.5
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 2.9e-38 163.3 221 56.1
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 1.9e-37 160.6 126 72.2
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 1.9e-37 160.6 124 69.4
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 4.2e-37 159.5 122 73.8
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 4.2e-37 159.5 122 73.8
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 9.3e-37 158.3 140 65.7
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 2.7e-36 156.8 140 62.1
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 3.4e-31 139.8 104 69.2
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 2.9e-30 136.7 172 45.9
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 6.5e-30 135.6 118 65.3
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 1.5e-26 124.4 161 45.3
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 1.4e-24 117.9 200 49.5
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.2e-22 110.5 110 58.2
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 3.9e-19 99.8 70 72.9
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 4.3e-18 96.3 115 52.2
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 6.3e-17 92.4 64 76.6
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 2.5e-13 80.5 73 61.6
arahy.Tifrunner.gnm1.ann1.IE7N3Z Arachis hypogaea HOM05D006300 ORTHO05D007623 1.5e-10 71.2 107 44.9
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 9.7e-10 68.6 40 82.5
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.8e-09 67.0 48 75.0
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 3.7e-09 66.6 61 57.4
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 8.2e-09 65.5 69 55.1


User provided reference genes

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