Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 0.0e+00 1190.3 587 100.0
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 1.3e-241 839.7 582 69.9
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 1.1e-240 836.6 547 74.4
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 7.4e-240 833.9 573 70.5
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 2.6e-237 825.5 547 72.8
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 1.7e-236 822.8 552 72.3
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 8.4e-236 820.5 588 69.6
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 8.4e-236 820.5 547 72.4
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 3.2e-235 818.5 548 72.1
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 1.2e-234 816.6 547 73.5
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 1.3e-233 813.1 588 69.0
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 2.3e-233 812.4 586 68.1
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 3.9e-233 811.6 585 67.4
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 5.1e-233 811.2 586 67.9
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 8.7e-233 810.4 559 70.5
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 1.1e-232 810.1 585 67.7
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 1.5e-232 809.7 586 68.4
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 1.5e-232 809.7 546 72.0
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 1.9e-232 809.3 547 71.1
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 9.7e-232 807.0 573 68.9
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 3.7e-231 805.1 551 71.0
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 6.3e-231 804.3 546 71.4
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 8.2e-231 803.9 546 71.4
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 1.1e-230 803.5 547 70.2
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 3.1e-230 802.0 590 66.9
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 5.3e-230 801.2 546 70.3
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 5.3e-230 801.2 546 71.1
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 5.3e-230 801.2 547 70.4
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 1.2e-229 800.0 585 66.8
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 2.6e-229 798.9 551 70.2
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 1.3e-228 796.6 592 66.7
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 1.7e-228 796.2 544 70.0
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 2.2e-228 795.8 599 66.3
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 5.0e-228 794.7 552 69.6
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 5.0e-228 794.7 547 70.4
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.1e-227 793.5 572 67.7
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.9e-227 792.7 614 64.0
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 1.9e-227 792.7 587 67.0
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 2.5e-227 792.3 572 67.5
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 3.2e-227 792.0 538 70.8
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 4.2e-227 791.6 552 70.5
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 7.2e-227 790.8 588 67.5
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 2.1e-226 789.3 580 68.1
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 4.6e-226 788.1 553 68.9
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 4.6e-226 788.1 546 70.3
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 6.7e-225 784.3 548 69.7
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 8.8e-225 783.9 544 69.5
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 1.5e-224 783.1 542 70.1
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 9.7e-224 780.4 609 64.2
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 1.4e-222 776.5 624 63.5
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 1.8e-222 776.2 638 61.9
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 2.4e-222 775.8 584 65.4
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 6.9e-222 774.2 584 65.6
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 4.5e-221 771.5 581 65.1
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 1.0e-220 770.4 584 65.4
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.7e-220 769.6 585 66.0
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 2.9e-220 768.8 548 67.3
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 3.8e-220 768.5 588 65.8
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 3.8e-220 768.5 584 65.2
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.8e-220 768.5 544 67.8
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 3.8e-220 768.5 584 66.1
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 5.0e-220 768.1 584 65.1
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 1.1e-219 766.9 585 65.1
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 2.5e-219 765.8 586 65.5
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 5.5e-219 764.6 552 67.2
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 5.5e-219 764.6 552 67.6
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 9.4e-219 763.8 552 67.0
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 1.5e-216 756.5 538 68.0
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 1.5e-213 746.5 547 67.3
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 2.0e-213 746.1 565 65.1
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 1.3e-212 743.4 500 71.0
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 1.6e-210 736.5 559 66.4
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 2.7e-210 735.7 546 66.8
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 3.0e-209 732.3 579 64.2
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 2.6e-208 729.2 517 69.1
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 4.4e-208 728.4 511 71.0
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 5.9e-205 718.0 488 70.7
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 9.4e-203 710.7 584 61.3
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 4.7e-202 708.4 473 70.6
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.7e-199 698.7 544 63.8
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 1.1e-195 687.2 486 68.3
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 2.5e-195 686.0 585 59.8
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 9.4e-195 684.1 512 66.8
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 4.9e-191 671.8 493 66.1
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 1.6e-189 666.8 580 59.8
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 1.8e-182 643.3 543 57.5
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 4.1e-182 642.1 544 56.8
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 3.0e-180 636.0 538 60.6
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 4.3e-179 632.1 591 58.5
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 8.6e-172 607.8 524 57.3
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 4.7e-170 602.1 415 71.6
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 4.9e-159 565.5 547 55.0
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.0e-144 516.9 318 77.4
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 7.1e-142 508.4 382 65.4
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 5.1e-140 502.3 531 52.4
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 6.9e-137 491.9 335 70.7
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 5.8e-136 488.8 313 73.8
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 7.6e-136 488.4 446 57.6
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 8.4e-135 485.0 542 50.2
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 1.0e-132 478.0 342 67.0
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 3.0e-132 476.5 566 44.2
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 2.5e-126 456.8 382 59.7
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 3.2e-118 429.9 426 54.7
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 7.4e-115 418.7 298 66.4
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 1.8e-105 387.5 365 52.1
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 9.7e-99 365.2 628 36.1
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.2e-88 331.6 228 70.2
Cpa.g.sc132.4 Carica papaya HOM05D002380 ORTHO05D008286 1.2e-85 321.6 204 74.5
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 4.4e-83 313.2 249 62.2
MBI19_g40900_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 2.0e-56 224.6 140 75.0
SEGI_31657 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 5.0e-55 219.9 160 65.6
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.3e-42 178.7 157 59.2
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 4.9e-42 176.8 149 55.7
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 1.2e-37 162.2 99 73.7
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 4.9e-34 150.2 159 51.6
COL.COLO4_21854 Corchorus olitorius HOM05D002380 ORTHO05D008286 6.4e-34 149.8 127 59.1
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 4.8e-29 133.7 94 66.0
SEGI_28059 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 1.0e-23 115.9 69 76.8
CBR_g12620 Chara braunii HOM05D005350 ORTHO05D008838 3.0e-23 114.4 100 53.0
LjContig00564g0015808 Lotus japonicus HOM05D002380 ORTHO05D008286 2.4e-17 94.7 62 66.1
Actinidia09730 Actinidia chinensis HOM05D002380 ORTHO05D008286 9.6e-14 82.8 106 49.1
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 3.7e-13 80.9 60 63.3
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 1.1e-12 79.3 96 36.5
SEGI_40123 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 9.0e-12 76.3 42 81.0
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 4.9e-10 70.5 44 75.0
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 4.6e-08 63.9 44 65.9


User provided reference genes

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