Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 7.7e-45 183.3 86 100.0
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 3.1e-38 161.4 85 82.4
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 3.1e-38 161.4 85 82.4
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 1.5e-37 159.1 85 83.5
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.5e-37 159.1 85 84.7
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 3.5e-37 157.9 85 81.2
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 5.9e-37 157.1 85 82.4
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 5.9e-37 157.1 85 78.8
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 5.9e-37 157.1 85 82.4
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.0e-36 156.4 85 82.4
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 2.9e-36 154.8 85 81.2
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 5.0e-36 154.1 85 81.2
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 6.5e-36 153.7 85 80.0
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 6.5e-36 153.7 85 80.0
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 8.5e-36 153.3 85 80.0
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.1e-35 152.9 85 80.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.1e-35 152.9 85 80.0
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.1e-35 152.9 85 80.0
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.4e-35 152.5 85 81.2
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.9e-35 152.1 85 80.0
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 1.9e-35 152.1 85 80.0
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 1.9e-35 152.1 85 78.8
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.9e-35 152.1 85 80.0
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 3.2e-35 151.4 85 77.6
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 3.2e-35 151.4 85 80.0
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 3.2e-35 151.4 85 78.8
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 4.2e-35 151.0 85 80.0
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 5.5e-35 150.6 85 77.6
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 9.4e-35 149.8 85 77.6
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 1.2e-34 149.4 85 77.6
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.2e-34 149.4 85 77.6
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.6e-34 149.1 85 77.6
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 1.6e-34 149.1 85 78.8
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 1.6e-34 149.1 85 78.8
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 2.1e-34 148.7 85 78.8
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 2.7e-34 148.3 85 77.6
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 3.6e-34 147.9 85 77.6
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 3.6e-34 147.9 85 72.9
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 4.7e-34 147.5 85 77.6
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 4.7e-34 147.5 85 77.6
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 4.7e-34 147.5 85 77.6
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 6.1e-34 147.1 85 77.6
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 8.0e-34 146.7 85 76.5
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 8.0e-34 146.7 85 76.5
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 1.0e-33 146.4 85 74.1
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 1.0e-33 146.4 85 76.5
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 1.0e-33 146.4 85 76.5
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.4e-33 146.0 85 75.3
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 1.4e-33 146.0 85 75.3
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 1.4e-33 146.0 85 76.5
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.4e-33 146.0 85 75.3
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 1.8e-33 145.6 85 76.5
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 2.3e-33 145.2 85 74.1
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 2.3e-33 145.2 85 72.9
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 2.3e-33 145.2 85 75.3
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 3.0e-33 144.8 85 74.1
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 3.0e-33 144.8 85 74.1
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.0e-33 144.8 96 70.8
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 3.9e-33 144.4 85 76.5
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 3.9e-33 144.4 85 74.1
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 5.2e-33 144.1 85 76.5
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 8.8e-33 143.3 85 75.3
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 8.8e-33 143.3 85 75.3
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 8.8e-33 143.3 85 76.5
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 2.0e-32 142.1 89 73.0
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.0e-32 142.1 85 70.6
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 2.6e-32 141.7 85 74.1
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 3.3e-32 141.4 85 70.6
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 4.4e-32 141.0 85 74.1
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 4.4e-32 141.0 85 71.8
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 4.4e-32 141.0 85 72.9
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 5.7e-32 140.6 85 72.9
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 5.7e-32 140.6 85 71.8
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 5.7e-32 140.6 85 72.9
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 1.1e-30 136.3 85 71.8
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.4e-30 136.0 85 72.9
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.8e-30 135.6 85 71.8
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 2.4e-30 135.2 85 72.9
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 2.4e-30 135.2 85 72.9
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.4e-30 135.2 85 72.9
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 3.1e-30 134.8 85 71.8
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 4.1e-30 134.4 85 70.6
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 5.3e-30 134.0 85 70.6
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 5.3e-30 134.0 85 71.8
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.3e-30 134.0 85 71.8
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 9.1e-30 133.3 85 69.4
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 9.1e-30 133.3 85 69.4
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 1.2e-29 132.9 85 71.8
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 1.2e-29 132.9 85 71.8
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.2e-29 132.9 114 57.9
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.7e-28 129.0 85 69.4
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 5.5e-27 124.0 85 63.5
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.2e-26 122.9 64 81.2
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.6e-26 122.5 85 65.9
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.6e-26 122.5 85 62.4
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.6e-26 122.5 85 62.4
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 4.7e-26 120.9 85 63.5
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 8.0e-26 120.2 95 61.1
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 8.8e-25 116.7 85 67.1
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 7.7e-21 103.6 81 63.0
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 4.7e-18 94.4 84 57.1
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 3.0e-17 91.7 85 55.3
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 2.0e-16 89.0 70 52.9
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 2.3e-12 75.5 85 47.1
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 2.5e-11 72.0 85 40.0
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 1.6e-10 69.3 85 44.7
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 8.9e-09 63.5 69 47.8
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 8.3e-07 57.0 85 38.8


User provided reference genes

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