Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1985 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 2.1e-32 141.7 71 100.0
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 3.3e-09 64.7 53 56.6
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 9.5e-09 63.2 53 54.7
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 1.2e-08 62.8 53 54.7
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 1.2e-08 62.8 60 55.0
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.6e-08 62.4 53 60.4
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 2.1e-08 62.0 61 50.8
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 3.6e-08 61.2 62 46.8
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 3.6e-08 61.2 59 54.2
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 8.1e-08 60.1 67 46.3
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 8.1e-08 60.1 58 53.4
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 8.1e-08 60.1 57 57.9
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 1.1e-07 59.7 51 52.9
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 1.1e-07 59.7 67 50.7
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.4e-07 59.3 54 55.6
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 1.4e-07 59.3 56 57.1
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 1.4e-07 59.3 54 51.9
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.8e-07 58.9 54 55.6
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.8e-07 58.9 52 53.8
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 2.4e-07 58.5 60 50.0
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 3.1e-07 58.2 60 53.3
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.1e-07 58.2 53 49.1
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 4.0e-07 57.8 60 50.0
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 4.0e-07 57.8 54 53.7
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 5.2e-07 57.4 54 53.7
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 5.2e-07 57.4 55 49.1
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 5.2e-07 57.4 55 49.1
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 5.2e-07 57.4 65 52.3
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 8.9e-07 56.6 54 53.7
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 8.9e-07 56.6 54 51.9
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 8.9e-07 56.6 58 51.7
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 8.9e-07 56.6 54 53.7
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 1.2e-06 56.2 57 52.6
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 1.2e-06 56.2 47 61.7
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 1.5e-06 55.8 54 55.6
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.5e-06 55.8 63 44.4
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.5e-06 55.8 58 56.9
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 2.0e-06 55.5 54 51.9
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 2.0e-06 55.5 60 46.7
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-06 55.5 62 53.2
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 2.0e-06 55.5 52 51.9
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 2.6e-06 55.1 60 48.3
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 2.6e-06 55.1 55 50.9
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 3.4e-06 54.7 60 46.7
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 3.4e-06 54.7 54 53.7
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 3.4e-06 54.7 54 51.9
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 3.4e-06 54.7 40 60.0
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 4.4e-06 54.3 52 48.1
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 5.8e-06 53.9 54 51.9
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.8e-06 53.9 54 53.7
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.8e-06 53.9 54 53.7
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 5.8e-06 53.9 40 65.0
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 7.6e-06 53.5 60 46.7
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 7.6e-06 53.5 52 50.0
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 7.6e-06 53.5 47 53.2
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 9.9e-06 53.1 50 52.0


User provided reference genes

Program Settings