Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 9.3e-81 303.5 158 100.0
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 9.7e-70 266.9 152 90.1
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.9e-57 226.1 159 74.2
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.2e-56 223.4 159 74.2
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 3.6e-56 221.9 156 73.7
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 2.3e-55 219.2 156 71.8
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.3e-55 219.2 156 71.2
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 2.3e-55 219.2 157 73.2
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.0e-55 218.8 157 73.9
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 3.0e-55 218.8 157 73.2
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.0e-55 218.8 157 73.9
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 4.0e-55 218.4 156 74.4
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 4.0e-55 218.4 158 70.9
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 5.2e-55 218.0 156 71.8
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 6.7e-55 217.6 157 73.2
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.7e-55 217.6 157 72.6
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 8.8e-55 217.2 158 72.2
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 8.8e-55 217.2 157 73.2
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.1e-54 216.9 156 71.2
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 1.5e-54 216.5 156 71.8
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.5e-54 216.5 157 73.9
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.0e-54 216.1 156 71.2
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 2.0e-54 216.1 157 73.9
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 2.0e-54 216.1 157 72.6
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 2.0e-54 216.1 156 71.8
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.6e-54 215.7 159 71.7
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 3.3e-54 215.3 156 69.9
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 3.3e-54 215.3 157 73.2
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 4.4e-54 214.9 157 72.6
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 5.7e-54 214.5 157 72.6
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 5.7e-54 214.5 156 71.8
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 7.5e-54 214.2 156 67.9
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 9.7e-54 213.8 158 70.3
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 1.3e-53 213.4 157 69.4
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 1.7e-53 213.0 156 67.9
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 2.2e-53 212.6 156 71.2
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 2.8e-53 212.2 156 69.2
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 2.8e-53 212.2 156 71.2
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 2.8e-53 212.2 156 71.2
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 3.7e-53 211.8 158 70.3
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 4.8e-53 211.5 158 70.9
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 4.8e-53 211.5 156 69.9
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.8e-53 211.5 156 68.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.3e-53 211.1 157 71.3
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.1e-52 210.3 160 72.5
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 1.4e-52 209.9 158 69.6
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.4e-52 209.9 160 71.2
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.8e-52 209.5 158 69.6
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 2.4e-52 209.1 156 68.6
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 3.1e-52 208.8 158 69.6
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 3.1e-52 208.8 156 67.9
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.1e-52 208.8 156 69.2
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 9.1e-52 207.2 157 68.8
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 9.1e-52 207.2 159 68.6
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 1.2e-51 206.8 158 69.0
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.7e-51 205.7 157 69.4
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 2.7e-51 205.7 156 68.6
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 2.7e-51 205.7 156 67.3
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 3.5e-51 205.3 153 69.3
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 3.5e-51 205.3 158 70.3
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 4.5e-51 204.9 157 66.9
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.0e-50 203.8 159 67.3
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 1.0e-50 203.8 157 66.9
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 1.3e-50 203.4 150 70.0
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 2.9e-50 202.2 158 69.0
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.9e-50 202.2 158 67.1
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.9e-50 202.2 158 67.1
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 3.8e-50 201.8 158 67.1
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 5.0e-50 201.4 156 67.3
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 1.1e-49 200.3 156 66.7
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 1.9e-49 199.5 159 67.9
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 1.9e-49 199.5 159 67.9
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 2.5e-49 199.1 157 66.2
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 2.5e-49 199.1 156 68.6
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 2.5e-49 199.1 153 68.6
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 3.2e-49 198.7 157 66.2
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 3.2e-49 198.7 152 71.7
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 4.2e-49 198.4 158 65.8
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 7.2e-49 197.6 158 65.8
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 7.2e-49 197.6 157 65.6
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 9.4e-49 197.2 156 66.0
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 9.4e-49 197.2 156 66.0
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.2e-48 196.8 157 64.3
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.2e-48 196.8 157 65.0
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.6e-48 196.4 157 63.7
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-48 196.4 156 65.4
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 2.1e-48 196.1 157 65.0
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 2.7e-48 195.7 161 64.0
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-48 195.7 158 65.8
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-48 195.7 158 65.8
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 2.7e-48 195.7 158 65.8
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 3.6e-48 195.3 157 65.6
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.6e-48 195.3 156 65.4
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.6e-48 195.3 156 65.4
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 3.6e-48 195.3 159 64.2
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 6.1e-48 194.5 157 64.3
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 8.0e-48 194.1 156 64.7
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 8.0e-48 194.1 156 64.7
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 8.0e-48 194.1 157 65.6
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 8.0e-48 194.1 160 63.1
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 8.0e-48 194.1 142 70.4
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 1.0e-47 193.7 157 65.0
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 1.0e-47 193.7 157 63.7
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-47 193.7 157 63.7
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 1.0e-47 193.7 133 72.9
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.0e-47 193.7 133 72.9
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 1.8e-47 193.0 161 66.5
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 1.8e-47 193.0 155 68.4
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 5.2e-47 191.4 161 64.0
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 6.8e-47 191.0 156 64.1
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 1.2e-46 190.3 152 67.1
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 2.0e-46 189.5 153 64.1
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.6e-46 189.1 161 63.4
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.6e-46 189.1 149 64.4
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.4e-46 188.7 156 63.5
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 3.4e-46 188.7 156 64.7
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 4.4e-46 188.3 156 62.8
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 5.7e-46 188.0 158 63.9
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 5.7e-46 188.0 159 61.0
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 5.7e-46 188.0 158 63.9
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 5.7e-46 188.0 158 63.9
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 5.7e-46 188.0 158 65.2
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 5.7e-46 188.0 110 83.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 5.7e-46 188.0 110 83.6
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 7.5e-46 187.6 164 62.8
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 1.3e-45 186.8 154 61.7
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 1.3e-45 186.8 154 61.7
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 2.2e-45 186.0 154 61.0
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 2.8e-45 185.7 154 61.0
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 3.7e-45 185.3 154 60.4
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.7e-45 185.3 156 61.5
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 3.7e-45 185.3 109 82.6
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 8.3e-45 184.1 148 65.5
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 1.2e-43 180.3 150 61.3
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 2.0e-43 179.5 159 62.3
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.3e-42 176.8 150 60.0
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.9e-42 175.6 157 62.4
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 2.7e-40 169.1 102 77.5
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 4.7e-40 168.3 102 76.5
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 3.0e-39 165.6 99 77.8
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 6.8e-39 164.5 121 72.7
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 1.2e-38 163.7 100 76.0
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.2e-38 163.7 135 65.9
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 1.7e-37 159.8 155 58.7
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.4e-36 156.8 156 57.1
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.4e-36 156.0 177 53.1
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 4.1e-36 155.2 156 59.6
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 1.8e-31 139.8 205 43.9
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.4e-30 135.6 151 49.7
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 2.9e-29 132.5 131 50.4
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 1.1e-28 130.6 162 45.7
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.4e-28 129.4 149 47.7
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 4.3e-25 118.6 159 41.5
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.6e-25 118.2 70 77.1
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 7.3e-25 117.9 136 47.8
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-24 117.1 70 77.1
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 4.7e-24 115.2 137 46.0
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 2.0e-22 109.8 161 44.1
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 4.4e-22 108.6 140 43.6
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 9.2e-20 100.9 153 43.1
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-19 100.1 67 71.6
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.7e-19 99.4 82 62.2
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 8.1e-16 87.8 165 43.0
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 3.5e-11 72.4 44 75.0


User provided reference genes

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