Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.3e-163 579.7 297 100.0
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 2.6e-60 236.5 300 48.3
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 1.4e-56 224.2 274 49.3
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.1e-53 212.6 302 45.0
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 3.8e-51 206.1 230 50.9
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 6.5e-51 205.3 230 50.9
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.8e-48 197.2 268 45.9
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 6.7e-48 195.3 299 42.1
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.7e-47 192.2 307 42.7
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 5.7e-47 192.2 225 48.0
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 4.8e-46 189.1 227 47.1
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 4.8e-46 189.1 307 42.0
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.4e-45 187.6 311 41.8
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 2.4e-45 186.8 328 39.9
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 2.4e-45 186.8 313 39.9
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 4.1e-45 186.0 318 41.2
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 5.3e-45 185.7 252 46.0
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 5.3e-45 185.7 307 41.4
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 7.0e-45 185.3 301 40.2
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 7.0e-45 185.3 229 49.8
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.0e-44 183.7 291 41.9
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 4.5e-44 182.6 314 40.1
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.0e-43 181.4 325 40.9
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.3e-43 181.0 316 40.2
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 2.9e-43 179.9 322 38.5
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 3.8e-43 179.5 228 44.7
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 3.8e-43 179.5 229 48.9
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 8.5e-43 178.3 301 41.9
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 8.5e-43 178.3 237 46.0
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.5e-42 176.8 309 40.8
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 2.5e-42 176.8 222 45.5
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 4.2e-42 176.0 302 38.7
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 4.2e-42 176.0 229 47.6
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 4.2e-42 176.0 251 43.0
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 7.2e-42 175.3 225 45.3
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 7.2e-42 175.3 290 39.7
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.2e-41 174.5 224 44.2
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 1.6e-41 174.1 250 43.2
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.6e-41 174.1 269 43.1
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 2.1e-41 173.7 223 43.0
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 2.7e-41 173.3 199 48.7
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.7e-41 173.3 301 40.9
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.6e-41 172.9 210 46.7
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 6.1e-41 172.2 302 39.1
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.0e-40 171.4 226 43.8
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.0e-40 171.4 267 43.4
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.4e-40 171.0 219 43.8
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 4.0e-40 169.5 229 44.1
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 5.2e-40 169.1 224 43.8
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 6.8e-40 168.7 301 40.2
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.5e-39 167.5 210 44.8
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.6e-39 166.8 225 43.1
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 4.4e-39 166.0 296 39.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 7.5e-39 165.2 259 41.3
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 9.7e-39 164.9 222 42.3
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 3.7e-38 162.9 211 45.0
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 6.3e-38 162.2 224 43.3
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 6.3e-38 162.2 319 38.9
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.3e-38 161.8 225 42.7
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.1e-37 161.4 220 42.3
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.1e-37 161.4 226 44.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 2.4e-37 160.2 223 42.6
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 3.1e-37 159.8 224 41.1
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 4.1e-37 159.5 234 41.5
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 4.1e-37 159.5 316 36.4
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 9.1e-37 158.3 221 42.1
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 9.1e-37 158.3 225 42.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-36 157.9 225 42.2
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 2.0e-36 157.1 195 45.1
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.5e-36 156.4 213 44.1
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 3.5e-36 156.4 261 40.2
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 4.5e-36 156.0 217 46.1
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 5.9e-36 155.6 207 44.0
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 5.9e-36 155.6 263 41.4
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 5.9e-36 155.6 306 38.2
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 7.7e-36 155.2 201 45.8
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.8e-35 152.9 305 35.7
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 6.5e-35 152.1 207 42.0
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.1e-34 151.4 214 41.6
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.9e-34 150.6 306 37.6
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 2.5e-34 150.2 159 52.2
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 4.2e-34 149.4 239 41.0
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 4.2e-34 149.4 161 52.8
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 3.6e-33 146.4 282 38.7
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 1.0e-32 144.8 216 42.6
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.4e-32 144.4 310 37.4
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 1.8e-32 144.1 216 42.1
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 3.0e-32 143.3 227 44.1
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 4.0e-32 142.9 223 41.7
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 6.8e-32 142.1 206 40.3
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 6.8e-32 142.1 206 40.3
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 4.4e-31 139.4 222 39.6
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 4.4e-31 139.4 207 40.1
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 7.5e-31 138.7 307 36.5
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 6.3e-30 135.6 233 38.6
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.4e-29 133.7 305 34.8
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 3.1e-29 133.3 206 40.8
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 3.1e-29 133.3 207 39.1
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 3.1e-29 133.3 311 33.4
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 7.0e-29 132.1 206 40.3
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 9.1e-29 131.7 277 33.9
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 7.7e-28 128.6 225 42.2
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 1.3e-27 127.9 285 34.4
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 2.3e-27 127.1 165 43.0
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 6.6e-27 125.6 189 39.7
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.1e-26 124.8 161 41.0
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 3.3e-26 123.2 241 36.5
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 7.2e-26 122.1 311 35.0
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 4.7e-25 119.4 233 36.5
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.7e-25 119.4 294 30.6
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 3.0e-24 116.7 262 35.1
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.2e-22 110.5 173 36.4
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 1.3e-19 101.3 220 35.0
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 3.1e-16 90.1 200 32.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 7.0e-13 79.0 181 34.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 5.0e-11 72.8 195 27.7
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 8.9e-08 62.0 104 40.4


User provided reference genes

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