Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1756 Ceratophyllum demersum HOM05D003089 ORTHO05D003544 2.4e-78 295.4 150 100.0
CDE07G0793 Ceratophyllum demersum HOM05D003089 ORTHO05D003544 2.7e-53 212.2 116 89.7
Rhsim11G0174300 Rhododendron simsii HOM05D003089 ORTHO05D003544 2.1e-37 159.5 117 65.0
TAR622G0009 Trochodendron aralioides HOM05D003089 ORTHO05D003544 4.6e-37 158.3 117 67.5
vmacro02128 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 7.9e-37 157.5 117 64.1
Prupe.8G100100 Prunus persica HOM05D003089 ORTHO05D003544 1.8e-36 156.4 117 64.1
GSVIVG01031931001 Vitis vinifera HOM05D003089 ORTHO05D003544 1.8e-36 156.4 119 65.5
Aqoxy3G03189 Aquilegia oxysepala HOM05D003089 ORTHO05D003544 3.0e-36 155.6 117 65.8
ClCG11G004530 Citrullus lanatus HOM05D003089 ORTHO05D003544 5.1e-36 154.8 117 64.1
CANSAT25G2870 Cannabis sativa HOM05D003089 ORTHO05D003544 6.7e-36 154.5 116 67.2
FvH4_2g08470 Fragaria vesca HOM05D003089 ORTHO05D003544 6.7e-36 154.5 117 61.5
FAN24G1972 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.7e-36 154.5 117 61.5
FAN24G2674 Fragaria x ananassa HOM05D003089 ORTHO05D003544 6.7e-36 154.5 117 61.5
MD05G1068200 Malus domestica HOM05D003089 ORTHO05D003544 8.7e-36 154.1 117 65.0
Actinidia00513 Actinidia chinensis HOM05D003089 ORTHO05D003544 1.1e-35 153.7 116 62.9
Sabra09G0087300 Salix brachista HOM05D003089 ORTHO05D003544 1.5e-35 153.3 117 61.5
Ca_15379_v3 Cicer arietinum L. HOM05D003089 ORTHO05D003544 2.5e-35 152.5 116 64.7
MELO3C020989.2 Cucumis melo HOM05D003089 ORTHO05D003544 3.3e-35 152.1 117 63.2
Glyma.04G013900 Glycine max HOM05D003089 ORTHO05D003544 3.3e-35 152.1 116 64.7
Potri.009G113700 Populus trichocarpa HOM05D003089 ORTHO05D003544 3.3e-35 152.1 117 61.5
TAR369G0041 Trochodendron aralioides HOM05D003089 ORTHO05D003544 4.3e-35 151.8 117 63.2
Lj1g0018032 Lotus japonicus HOM05D003089 ORTHO05D003544 7.4e-35 151.0 116 63.8
FAN27G3350 Fragaria x ananassa HOM05D003089 ORTHO05D003544 9.6e-35 150.6 116 60.3
Lsat_1_v5_gn_9_109381 Lactuca sativa HOM05D003089 ORTHO05D003544 9.6e-35 150.6 117 62.4
Sabra04G0101100 Salix brachista HOM05D003089 ORTHO05D003544 9.6e-35 150.6 116 62.1
Ciclev10027664m.g Citrus clementina HOM05D003089 ORTHO05D003544 1.6e-34 149.8 113 66.4
FAN15G0570 Fragaria x ananassa HOM05D003089 ORTHO05D003544 1.6e-34 149.8 117 59.0
RcHm_v2.0_Chr6g0263811 Rosa chinensis HOM05D003089 ORTHO05D003544 1.6e-34 149.8 117 63.2
CsaV3_2G014560 Cucumis sativus L. HOM05D003089 ORTHO05D003544 2.1e-34 149.4 117 62.4
Potri.004G152400 Populus trichocarpa HOM05D003089 ORTHO05D003544 2.1e-34 149.4 117 60.7
Haze_02363 Corylus avellana HOM05D003089 ORTHO05D003544 2.8e-34 149.1 117 60.7
Nitab4.5_0000336g0120 Nicotiana tabacum HOM05D003089 ORTHO05D003544 2.8e-34 149.1 117 62.4
Phvul.009G009000 Phaseolus vulgaris HOM05D003089 ORTHO05D003544 2.8e-34 149.1 116 62.9
Glyma.06G013800 Glycine max HOM05D003089 ORTHO05D003544 3.7e-34 148.7 116 63.8
Nitab4.5_0000736g0060 Nicotiana tabacum HOM05D003089 ORTHO05D003544 3.7e-34 148.7 117 62.4
Sopen11g019550 Solanum pennellii HOM05D003089 ORTHO05D003544 3.7e-34 148.7 117 61.5
CiPaw.06G137000 Carya illinoinensis HOM05D003089 ORTHO05D003544 4.8e-34 148.3 117 61.5
MD10G1078200 Malus domestica HOM05D003089 ORTHO05D003544 6.2e-34 147.9 117 60.7
TWI75G1044 Tripterygium wilfordii HOM05D003089 ORTHO05D003544 8.1e-34 147.5 117 63.2
Nn3g17070 Nelumbo nucifera HOM05D003089 ORTHO05D003544 1.1e-33 147.1 117 62.4
Sed0010503 Sechium edule HOM05D003089 ORTHO05D003544 1.4e-33 146.7 117 62.4
Solyc11g043130.2 Solanum lycopersicum HOM05D003089 ORTHO05D003544 1.4e-33 146.7 117 60.7
Medtr3g116250 Medicago truncatula HOM05D003089 ORTHO05D003544 1.8e-33 146.4 116 62.9
Nn1g03865 Nelumbo nucifera HOM05D003089 ORTHO05D003544 2.4e-33 146.0 149 52.3
TPR.G38232 Trifolium pratense HOM05D003089 ORTHO05D003544 2.4e-33 146.0 123 59.3
QL11p043039 Quercus lobata HOM05D003089 ORTHO05D003544 4.0e-33 145.2 116 58.6
COL.COLO4_32443 Corchorus olitorius HOM05D003089 ORTHO05D003544 5.3e-33 144.8 117 62.4
Duzib132G0336 Durio zibethinus HOM05D003089 ORTHO05D003544 9.0e-33 144.1 111 64.0
Peaxi162Scf00684g00421 Petunia axillaris HOM05D003089 ORTHO05D003544 9.0e-33 144.1 117 58.1
arahy.Tifrunner.gnm1.ann1.AHB8GW Arachis hypogaea HOM05D003089 ORTHO05D003544 1.2e-32 143.7 117 60.7
arahy.Tifrunner.gnm1.ann1.U64SVT Arachis hypogaea HOM05D003089 ORTHO05D003544 1.2e-32 143.7 117 60.7
CSS0026532 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 1.2e-32 143.7 117 57.3
Manes.15G165000 Manihot esculenta HOM05D003089 ORTHO05D003544 1.2e-32 143.7 117 57.3
Sed0019364 Sechium edule HOM05D003089 ORTHO05D003544 1.2e-32 143.7 117 60.7
Psat5g008280 Pisum sativum HOM05D003089 ORTHO05D003544 1.5e-32 143.3 116 60.3
CSS0027140 Camellia sinensis var. sinensis HOM05D003089 ORTHO05D003544 2.6e-32 142.5 117 56.4
Duzib052G1069 Durio zibethinus HOM05D003089 ORTHO05D003544 2.6e-32 142.5 112 62.5
Lalb_Chr23g0265471 Lupinus albus HOM05D003089 ORTHO05D003544 2.6e-32 142.5 116 61.2
Lj9C368G4 Lonicera japonica HOM05D003089 ORTHO05D003544 3.4e-32 142.1 116 62.1
CANSAT21G0290 Cannabis sativa HOM05D003089 ORTHO05D003544 4.5e-32 141.7 117 62.4
MELO3C012545.2 Cucumis melo HOM05D003089 ORTHO05D003544 4.5e-32 141.7 117 61.5
ClCG02G005170 Citrullus lanatus HOM05D003089 ORTHO05D003544 5.8e-32 141.4 117 61.5
Oeu020770.2 Olea europaea HOM05D003089 ORTHO05D003544 5.8e-32 141.4 117 59.0
Eucgr.G00449 Eucalyptus grandis HOM05D003089 ORTHO05D003544 9.9e-32 140.6 117 59.8
Thecc.02G123600 Theobroma cacao HOM05D003089 ORTHO05D003544 9.9e-32 140.6 112 60.7
CsaV3_7G023410 Cucumis sativus L. HOM05D003089 ORTHO05D003544 1.7e-31 139.8 117 60.7
EL10Ac9g21746 Beta vulgaris HOM05D003089 ORTHO05D003544 2.9e-31 139.0 111 62.2
Cc02_g17780 Coffea canephora HOM05D003089 ORTHO05D003544 2.9e-31 139.0 116 57.8
CDE07G1820 Ceratophyllum demersum HOM05D003089 ORTHO05D003544 3.8e-31 138.7 72 94.4
Lalb_Chr00c44g0412571 Lupinus albus HOM05D003089 ORTHO05D003544 4.9e-31 138.3 116 58.6
Lalb_Chr08g0246561 Lupinus albus HOM05D003089 ORTHO05D003544 4.9e-31 138.3 116 58.6
SalBow6G2407 Salvia bowleyana HOM05D003089 ORTHO05D003544 6.4e-31 137.9 117 55.6
SalBow6G4859 Salvia bowleyana HOM05D003089 ORTHO05D003544 6.4e-31 137.9 117 55.6
MSTRG.20096 Avicennia marina HOM05D003089 ORTHO05D003544 8.4e-31 137.5 116 56.0
Nitab4.5_0000982g0100 Nicotiana tabacum HOM05D003089 ORTHO05D003544 8.4e-31 137.5 117 54.7
CAN.G566.47 Capsicum annuum HOM05D003089 ORTHO05D003544 1.1e-30 137.1 117 56.4
Gohir.D04G158700 Gossypium hirsutum HOM05D003089 ORTHO05D003544 1.1e-30 137.1 112 59.8
Gorai.012G146100 Gossypium raimondii HOM05D003089 ORTHO05D003544 1.1e-30 137.1 112 59.8
HanXRQChr10g0307291 Helianthus annuus HOM05D003089 ORTHO05D003544 1.1e-30 137.1 117 59.0
Nitab4.5_0002814g0110 Nicotiana tabacum HOM05D003089 ORTHO05D003544 1.1e-30 137.1 117 58.1
THA.LOC104804915 Tarenaya hassleriana HOM05D003089 ORTHO05D003544 1.9e-30 136.3 117 56.4
Gohir.A04G117000 Gossypium hirsutum HOM05D003089 ORTHO05D003544 2.4e-30 136.0 112 58.9
Hund06224 Selenicereus undatus HOM05D003089 ORTHO05D003544 2.4e-30 136.0 116 61.2
Lsat_1_v5_gn_5_118040 Lactuca sativa HOM05D003089 ORTHO05D003544 4.2e-30 135.2 117 59.8
Sc18g0004600 Simmondsia chinensis HOM05D003089 ORTHO05D003544 7.1e-30 134.4 117 54.7
PGR042G2422 Punica granatum HOM05D003089 ORTHO05D003544 9.3e-30 134.0 117 56.4
Gohir.D02G202895 Gossypium hirsutum HOM05D003089 ORTHO05D003544 1.2e-29 133.7 112 57.1
Gorai.005G228400 Gossypium raimondii HOM05D003089 ORTHO05D003544 1.2e-29 133.7 112 57.1
SHI05424 Sapria himalayana HOM05D003089 ORTHO05D003544 1.2e-29 133.7 117 59.0
Migut.B00253 Erythranthe guttata HOM05D003089 ORTHO05D003544 2.1e-29 132.9 117 55.6
PSO478G0141 Papaver somniferum HOM05D003089 ORTHO05D003544 2.1e-29 132.9 117 53.8
Gohir.A03G179500 Gossypium hirsutum HOM05D003089 ORTHO05D003544 2.7e-29 132.5 112 57.1
DCAR_000244 Daucus carota HOM05D003089 ORTHO05D003544 3.5e-29 132.1 123 53.7
DCAR_003639 Daucus carota HOM05D003089 ORTHO05D003544 3.5e-29 132.1 123 53.7
ECA234G4407 Erigeron canadensis HOM05D003089 ORTHO05D003544 3.5e-29 132.1 117 56.4
Lj5C199G5 Lonicera japonica HOM05D003089 ORTHO05D003544 4.6e-29 131.7 115 55.7
AUR62011350 Chenopodium quinoa HOM05D003089 ORTHO05D003544 6.0e-29 131.3 117 59.0
Ah.01g019560 Amaranthus hybridus HOM05D003089 ORTHO05D003544 7.9e-29 131.0 121 55.4
PSO161G0089 Papaver somniferum HOM05D003089 ORTHO05D003544 1.0e-28 130.6 117 53.0
SGA_v2.0_scaffold58G20555 Striga asiatica HOM05D003089 ORTHO05D003544 1.8e-28 129.8 117 53.8
unitig_61.g25998 Utricularia gibba HOM05D003089 ORTHO05D003544 1.8e-28 129.8 117 54.7
Aa31LG10G4610 Aethionema arabicum HOM05D003089 ORTHO05D003544 3.0e-28 129.0 117 53.8
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 3.9e-28 128.6 120 57.5
CARHR039330 Cardamine hirsuta HOM05D003089 ORTHO05D003544 2.5e-27 125.9 117 53.8
Hund00286 Selenicereus undatus HOM05D003089 ORTHO05D003544 3.3e-27 125.6 117 52.1
BcaB02g11071 Brassica carinata HOM05D003089 ORTHO05D003544 1.6e-26 123.2 117 51.3
SGA_v2.0_scaffold32G13157 Striga asiatica HOM05D003089 ORTHO05D003544 1.6e-26 123.2 117 53.8
Sp1g36200 Schrenkiella parvula HOM05D003089 ORTHO05D003544 2.1e-26 122.9 117 51.3
AL1G56300 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 2.8e-26 122.5 117 52.1
BcaC05g27516 Brassica carinata HOM05D003089 ORTHO05D003544 3.7e-26 122.1 114 52.6
C05p34900 Brassica napus HOM05D003089 ORTHO05D003544 3.7e-26 122.1 114 52.6
BolC5t32215H Brassica oleracea HOM05D003089 ORTHO05D003544 3.7e-26 122.1 114 52.6
MBI03_g27663_MAGBIO Magnolia biondii HOM05D003089 ORTHO05D003544 3.7e-26 122.1 122 49.2
Aa31LG10G3360 Aethionema arabicum HOM05D003089 ORTHO05D003544 8.2e-26 120.9 128 50.0
BcaC08g43133 Brassica carinata HOM05D003089 ORTHO05D003544 8.2e-26 120.9 117 50.4
BolC6t35540H Brassica oleracea HOM05D003089 ORTHO05D003544 8.2e-26 120.9 117 50.4
Carub.0001s3852 Capsella rubella HOM05D003089 ORTHO05D003544 8.2e-26 120.9 117 52.1
A06p03880 Brassica napus HOM05D003089 ORTHO05D003544 1.1e-25 120.6 117 50.4
BraA06t23597Z Brassica rapa HOM05D003089 ORTHO05D003544 1.1e-25 120.6 117 50.4
Thhalv10011177m.g Eutrema salsugineum HOM05D003089 ORTHO05D003544 1.1e-25 120.6 117 50.4
AT1G49340 Arabidopsis thaliana HOM05D003089 ORTHO05D003544 1.8e-25 119.8 117 51.3
BcaB07g33678 Brassica carinata HOM05D003089 ORTHO05D003544 1.8e-25 119.8 117 50.4
HanXRQChr08g0216591 Helianthus annuus HOM05D003089 ORTHO05D003544 2.4e-25 119.4 111 48.6
A05p20670 Brassica napus HOM05D003089 ORTHO05D003544 2.0e-24 116.3 118 50.8
C06p04080 Brassica napus HOM05D003089 ORTHO05D003544 2.0e-24 116.3 117 47.9
BraA05t20975Z Brassica rapa HOM05D003089 ORTHO05D003544 2.0e-24 116.3 118 50.8
AUR62016712 Chenopodium quinoa HOM05D003089 ORTHO05D003544 7.6e-24 114.4 103 60.2
Dinv42085 Davidia involucrata HOM05D003089 ORTHO05D003544 2.2e-23 112.8 90 64.4
Carub.0001s3993 Capsella rubella HOM05D003089 ORTHO05D003544 2.9e-23 112.5 125 48.8
ATR0749G081 Amborella trichopoda HOM05D003089 ORTHO05D003544 4.9e-23 111.7 117 47.0
HPP92_026531 Vanilla planifolia HOM05D003089 ORTHO05D003544 8.4e-23 110.9 122 47.5
AT1G51040 Arabidopsis thaliana HOM05D003089 ORTHO05D003544 2.5e-22 109.4 112 49.1
AL4G25950 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 9.3e-22 107.5 112 46.4
AL307U10030 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 2.1e-21 106.3 112 46.4
vmacro02129 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 2.7e-21 105.9 88 58.0
Peaxi162Scf00242g00019 Petunia axillaris HOM05D003089 ORTHO05D003544 7.9e-21 104.4 119 48.7
BcaB07g33546 Brassica carinata HOM05D003089 ORTHO05D003544 1.1e-19 100.5 112 42.9
BcaC08g43274 Brassica carinata HOM05D003089 ORTHO05D003544 1.3e-18 97.1 112 41.1
A06p02740 Brassica napus HOM05D003089 ORTHO05D003544 1.3e-18 97.1 110 41.8
C06p06220 Brassica napus HOM05D003089 ORTHO05D003544 1.3e-18 97.1 112 41.1
BolC6t35733H Brassica oleracea HOM05D003089 ORTHO05D003544 1.3e-18 97.1 112 41.1
BraA06t23482Z Brassica rapa HOM05D003089 ORTHO05D003544 2.2e-18 96.3 110 41.8
SEGI_36294 Sequoiadendron giganteum HOM05D003089 ORTHO05D003544 4.8e-18 95.1 112 42.9
Mapoly0001s0228 Marchantia polymorpha HOM05D003089 ORTHO05D003544 4.6e-13 78.6 113 41.6
Mapoly0001s0451 Marchantia polymorpha HOM05D003089 ORTHO05D003544 6.9e-09 64.7 109 36.7
Pp3c22_1940 Physcomitrium patens HOM05D003089 ORTHO05D003544 4.5e-08 62.0 112 32.1
Zm00001eb216400 Zea mays HOM05D003089 ORTHO05D003544 4.5e-08 62.0 156 32.1


User provided reference genes

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