Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1213 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 6.1e-187 657.5 376 100.0
CDE07G2012 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 7.5e-161 570.9 376 88.3
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.4e-37 161.4 382 39.3
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 9.2e-34 148.7 380 38.7
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 1.4e-26 124.8 398 39.4
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 3.2e-26 123.6 377 37.1
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 9.5e-23 112.1 405 34.6
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.4e-21 108.2 325 35.4
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 5.8e-20 102.8 354 37.6
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 9.8e-20 102.1 324 36.1
FAN09G0172 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.9e-19 100.5 300 36.3
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 6.4e-19 99.4 337 33.5
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 6.4e-19 99.4 337 33.5
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 6.4e-19 99.4 337 33.5
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 8.3e-19 99.0 303 35.6
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 1.9e-18 97.8 307 36.5
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 4.1e-18 96.7 325 33.8
Duzib093G0840 Durio zibethinus HOM05D004426 ORTHO05D005417 5.4e-18 96.3 349 39.5
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 1.2e-17 95.1 313 36.7
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 6.0e-17 92.8 304 33.9
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 7.8e-17 92.4 302 35.1
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 1.3e-16 91.7 312 39.7
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 5.0e-16 89.7 365 31.2
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 6.6e-16 89.4 313 32.9
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 6.6e-16 89.4 327 34.6
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.9e-15 87.8 300 34.3
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 2.5e-15 87.4 363 30.3
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 3.3e-15 87.0 322 34.5
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 5.6e-15 86.3 236 35.2
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 1.2e-14 85.1 379 32.2
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 1.2e-14 85.1 240 37.1
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 2.8e-14 84.0 300 33.3
Oeu036109.3 Olea europaea HOM05D004426 ORTHO05D005417 3.6e-14 83.6 284 35.9
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 4.7e-14 83.2 318 34.6
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 1.1e-13 82.0 264 34.1
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 2.3e-13 80.9 279 35.5
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 4.0e-13 80.1 279 35.1
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 5.2e-13 79.7 320 31.2
Cpa.g.sc104.21 Carica papaya HOM05D004426 ORTHO05D005417 1.5e-12 78.2 213 38.0
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 1.5e-12 78.2 409 31.3
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 1.5e-12 78.2 307 32.9
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 4.4e-12 76.6 317 33.4
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 2.2e-11 74.3 267 33.0
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 6.4e-11 72.8 395 32.2
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 8.3e-11 72.4 297 37.7
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 1.1e-10 72.0 245 34.3
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 2.4e-10 70.9 346 33.5
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 4.1e-10 70.1 297 32.3
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 4.1e-10 70.1 219 37.4
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 4.1e-10 70.1 222 36.5
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 5.4e-10 69.7 382 29.6
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 9.2e-10 68.9 276 35.1
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 1.6e-09 68.2 276 37.0
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 4.6e-09 66.6 382 29.3
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 4.6e-09 66.6 316 30.1
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 7.8e-09 65.9 219 34.7
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.0e-08 65.5 286 33.2
Dinv31766 Davidia involucrata HOM05D004426 ORTHO05D005417 1.0e-08 65.5 428 30.4
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 1.0e-08 65.5 321 30.5
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 1.3e-08 65.1 185 45.9
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 1.7e-08 64.7 271 32.1
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 1.7e-08 64.7 271 32.1
Haze_20162 Corylus avellana HOM05D004426 ORTHO05D005417 3.0e-08 63.9 337 30.3
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 3.9e-08 63.5 331 29.3
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 5.1e-08 63.2 298 32.6
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 1.5e-07 61.6 403 29.0
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.5e-07 61.6 392 28.1
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 3.3e-07 60.5 402 28.9
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 5.6e-07 59.7 253 30.0
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 5.6e-07 59.7 352 27.6
Actinidia03993 Actinidia chinensis HOM05D004426 ORTHO05D005417 9.5e-07 58.9 107 45.8
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 1.2e-06 58.5 328 29.9
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 2.1e-06 57.8 402 26.6
Lj1A1205G57 Lonicera japonica HOM05D004426 ORTHO05D005417 3.6e-06 57.0 319 29.2
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 6.2e-06 56.2 332 31.6
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 8.1e-06 55.8 291 30.6


User provided reference genes

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