Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 3.0e-142 508.4 251 100.0
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.4e-102 375.9 249 74.7
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 5.2e-102 374.8 249 70.7
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 6.8e-102 374.4 249 71.5
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 2.0e-101 372.9 249 69.9
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 2.6e-101 372.5 249 70.7
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 7.6e-101 370.9 250 73.2
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.3e-100 370.2 248 71.8
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.3e-100 370.2 249 70.7
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 1.7e-100 369.8 249 71.1
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.7e-100 369.8 249 71.5
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 2.2e-100 369.4 249 70.7
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.4e-100 367.9 249 69.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 6.4e-100 367.9 249 69.9
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.4e-99 366.7 248 72.2
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.4e-99 366.7 248 72.2
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 2.4e-99 365.9 249 71.1
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 2.4e-99 365.9 249 69.5
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 2.4e-99 365.9 248 71.4
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 3.2e-99 365.5 248 71.4
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.2e-99 365.5 249 70.3
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 4.2e-99 365.2 248 71.4
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 4.2e-99 365.2 249 70.3
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.2e-99 365.2 249 70.3
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 4.2e-99 365.2 249 69.1
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 5.4e-99 364.8 249 70.3
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.4e-99 364.8 249 70.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.4e-99 364.8 249 69.9
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 5.4e-99 364.8 249 69.5
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 9.3e-99 364.0 248 71.8
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.6e-98 363.2 249 69.1
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.6e-98 363.2 249 70.7
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.7e-98 362.5 252 69.4
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 4.6e-98 361.7 249 69.1
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 4.6e-98 361.7 249 69.1
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 4.6e-98 361.7 249 68.3
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 4.6e-98 361.7 249 68.3
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 6.0e-98 361.3 249 68.3
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 6.0e-98 361.3 249 69.5
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.0e-97 360.5 248 70.2
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.3e-97 360.1 248 71.0
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.3e-97 360.1 249 69.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.7e-97 359.8 248 70.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 1.7e-97 359.8 248 70.2
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 3.9e-97 358.6 249 69.9
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 3.9e-97 358.6 248 69.4
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 8.7e-97 357.5 248 69.8
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.9e-96 356.3 248 68.1
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.5e-96 355.9 248 68.5
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 5.6e-96 354.8 249 69.1
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 5.6e-96 354.8 249 67.1
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 5.6e-96 354.8 249 67.1
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 7.3e-96 354.4 248 68.5
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.3e-95 353.6 248 69.0
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 2.1e-95 352.8 248 68.5
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 8.1e-95 350.9 250 69.2
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.4e-94 350.1 249 69.9
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 1.8e-94 349.7 248 67.3
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 6.9e-94 347.8 251 70.5
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.2e-93 347.1 249 66.7
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.6e-93 345.9 249 67.1
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.4e-93 345.1 249 66.3
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 5.8e-93 344.7 249 67.5
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 5.8e-93 344.7 249 66.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 7.6e-93 344.4 248 68.1
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 9.9e-93 344.0 248 67.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.9e-92 342.4 248 67.7
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 2.9e-92 342.4 248 67.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 3.8e-92 342.0 248 68.1
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.8e-92 342.0 233 69.1
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 4.9e-92 341.7 248 68.1
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 4.9e-92 341.7 248 68.1
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 6.4e-92 341.3 248 66.1
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 8.4e-92 340.9 248 66.5
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.9e-91 339.7 249 65.9
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.4e-91 339.3 248 65.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.2e-91 339.0 248 66.5
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.2e-91 338.6 249 65.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 5.4e-91 338.2 256 64.8
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 5.4e-91 338.2 248 67.7
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 7.1e-91 337.8 248 66.5
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 9.3e-91 337.4 248 67.7
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 9.3e-91 337.4 240 66.2
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 6.0e-90 334.7 248 65.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.3e-89 333.6 248 65.7
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 3.9e-89 332.0 248 65.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 3.9e-89 332.0 248 65.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 3.9e-89 332.0 248 65.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 8.7e-89 330.9 250 65.6
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.5e-88 329.3 251 65.3
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.6e-87 326.6 252 64.7
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 2.8e-87 325.9 251 64.1
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 4.8e-87 325.1 252 63.9
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 8.1e-87 324.3 246 63.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.4e-86 323.6 251 64.1
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 9.0e-86 320.9 219 72.1
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 2.6e-85 319.3 251 62.9
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.3e-84 317.0 251 63.7
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.1e-78 297.4 197 71.1
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.6e-77 292.7 252 60.3
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.9e-76 289.3 250 60.4
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 1.4e-75 287.0 249 57.8
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 3.0e-73 279.3 196 68.4
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 6.7e-73 278.1 249 56.6
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 7.9e-66 254.6 174 70.1
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.5e-64 250.4 183 66.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.5e-64 250.4 211 61.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.4e-64 248.1 172 69.2
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-61 240.7 166 66.9
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 2.0e-61 240.0 161 69.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 6.5e-60 235.0 161 68.3
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.9e-59 233.4 170 64.1
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 9.4e-59 231.1 294 46.6
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.0e-52 211.1 243 46.5
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 3.2e-51 206.1 249 49.0
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.3e-39 167.5 177 49.7
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 7.0e-38 161.8 301 35.9
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 7.0e-38 161.8 110 71.8
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.6e-26 124.0 88 62.5
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.8e-25 120.6 72 73.6
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 2.2e-23 113.6 278 33.8
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 3.7e-23 112.8 86 65.1
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.7e-23 112.8 113 51.3
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.4e-22 110.9 142 45.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 8.0e-18 95.1 105 52.4
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 3.0e-17 93.2 81 58.0
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.0e-16 90.5 60 63.3
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.6e-16 90.1 64 68.8


User provided reference genes

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