Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 0.0e+00 1153.7 723 100.0
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 5.6e-96 356.3 635 42.8
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 2.9e-84 317.4 614 42.8
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 8.3e-84 315.8 610 41.8
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 1.4e-83 315.1 654 40.7
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 1.9e-83 314.7 746 39.7
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 2.1e-82 311.2 624 40.5
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 2.7e-82 310.8 566 42.2
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 2.3e-81 307.8 767 41.1
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 2.3e-81 307.8 672 39.4
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 5.0e-81 306.6 846 38.7
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 3.3e-80 303.9 594 40.7
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 3.3e-80 303.9 613 41.8
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 1.6e-79 301.6 615 40.0
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 2.1e-79 301.2 756 37.8
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 2.8e-79 300.8 604 40.4
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 8.1e-79 299.3 569 41.5
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 1.1e-78 298.9 804 38.2
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 1.4e-78 298.5 596 40.3
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 5.2e-78 296.6 617 40.4
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 2.0e-77 294.7 591 41.3
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 2.6e-77 294.3 583 42.2
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 3.4e-77 293.9 618 38.0
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 3.4e-77 293.9 572 40.6
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 3.4e-77 293.9 582 41.1
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 5.8e-77 293.1 608 40.5
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 9.9e-77 292.4 613 39.2
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.3e-76 292.0 607 39.5
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.2e-76 291.2 616 38.6
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 2.2e-76 291.2 621 39.1
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 2.9e-76 290.8 636 38.5
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 4.9e-76 290.0 596 40.6
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 1.1e-75 288.9 619 39.3
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 1.4e-75 288.5 669 37.8
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 2.4e-75 287.7 649 38.7
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 2.4e-75 287.7 624 39.3
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 2.4e-75 287.7 581 40.3
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 4.1e-75 287.0 631 38.5
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 1.2e-74 285.4 587 39.9
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 6.0e-74 283.1 617 42.0
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 1.7e-73 281.6 568 40.1
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 2.3e-73 281.2 623 38.5
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 6.6e-73 279.6 568 39.4
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 6.6e-73 279.6 525 40.8
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 6.6e-73 279.6 623 37.7
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 8.6e-73 279.3 577 38.8
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 2.5e-72 277.7 633 37.0
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 2.5e-72 277.7 577 38.5
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 3.3e-72 277.3 575 38.4
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 7.3e-72 276.2 553 40.0
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 7.3e-72 276.2 635 37.5
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 7.3e-72 276.2 619 38.1
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 2.8e-71 274.2 612 37.3
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 4.7e-71 273.5 371 46.6
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 3.1e-70 270.8 586 40.1
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 5.2e-70 270.0 578 38.8
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 5.8e-69 266.5 573 39.3
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 9.9e-69 265.8 750 37.7
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 1.3e-68 265.4 615 36.7
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 2.9e-68 264.2 594 38.6
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 1.9e-67 261.5 579 38.0
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 7.1e-67 259.6 379 47.5
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 4.6e-66 256.9 369 46.9
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 1.0e-65 255.8 585 35.7
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 2.3e-65 254.6 605 37.2
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 1.9e-64 251.5 365 43.0
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 5.2e-62 243.4 633 36.0
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 6.9e-62 243.0 639 35.1
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 6.9e-62 243.0 580 38.1
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 9.9e-61 239.2 361 41.8
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 1.3e-60 238.8 599 36.6
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 4.9e-60 236.9 598 36.8
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 4.9e-60 236.9 373 42.6
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 2.4e-59 234.6 639 35.4
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 1.2e-58 232.3 595 35.0
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 1.2e-58 232.3 552 37.0
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 2.7e-58 231.1 605 35.9
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 2.7e-58 231.1 607 34.3
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 3.5e-58 230.7 602 35.5
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 1.7e-57 228.4 601 34.4
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 1.7e-57 228.4 562 36.5
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 2.3e-57 228.0 601 36.8
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 3.0e-57 227.6 562 36.1
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 3.9e-57 227.3 608 35.7
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 1.9e-56 224.9 559 36.5
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 1.1e-54 219.2 697 31.7
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 2.0e-53 214.9 860 33.3
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 7.9e-50 203.0 367 43.6
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 3.0e-49 201.1 558 34.9
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 2.1e-47 194.9 599 33.6
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 1.5e-45 188.7 578 33.7
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 1.3e-44 185.7 577 31.9
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 1.7e-44 185.3 366 38.0
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.9e-44 184.5 266 44.7
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.4e-43 182.2 578 38.1
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 3.3e-40 171.0 344 37.5
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 2.1e-39 168.3 574 31.4
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 7.1e-35 153.3 677 29.0
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 6.0e-34 150.2 553 31.5
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 2.5e-32 144.8 486 34.0
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 5.0e-28 130.6 165 47.3
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.1e-26 125.2 201 42.3
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 5.0e-12 77.4 108 40.7
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 8.2e-07 60.1 55 47.3
PRCOL_00002654 Prasinoderma coloniale HOM05D002594 ORTHO05D003499 9.1e-06 56.6 64 37.5


User provided reference genes

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