Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0740 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 2.1e-41 171.8 78 100.0
CAN.G487.5 Capsicum annuum HOM05D005727 ORTHO05D007324 6.8e-24 113.6 61 88.5
Cfa017035 Carpinus fangiana HOM05D005727 ORTHO05D007324 8.8e-24 113.2 63 84.1
GSVIVG01030181001 Vitis vinifera HOM05D005727 ORTHO05D007324 8.8e-24 113.2 63 81.0
Sabra04G0153300 Salix brachista HOM05D005727 ORTHO05D007324 1.5e-23 112.5 63 81.0
Cpa.g.sc86.59 Carica papaya HOM05D005727 ORTHO05D007324 2.0e-23 112.1 63 82.5
CiPaw.09G221300 Carya illinoinensis HOM05D005727 ORTHO05D007324 2.0e-23 112.1 63 82.5
Nn2g10300 Nelumbo nucifera HOM05D005727 ORTHO05D007324 2.0e-23 112.1 63 82.5
Potri.016G136600 Populus trichocarpa HOM05D005727 ORTHO05D007324 2.0e-23 112.1 63 82.5
PGSC0003DMG400031234 Solanum tuberosum HOM05D005727 ORTHO05D007324 2.0e-23 112.1 61 85.2
arahy.Tifrunner.gnm1.ann1.FBM6UZ Arachis hypogaea HOM05D005727 ORTHO05D007324 3.4e-23 111.3 63 82.5
Peaxi162Scf01238g00221 Petunia axillaris HOM05D005727 ORTHO05D007324 3.4e-23 111.3 61 83.6
Atru.chr8.117 Acer truncatum HOM05D005727 ORTHO05D007324 4.4e-23 110.9 63 81.0
Haze_21174 Corylus avellana HOM05D005727 ORTHO05D007324 5.7e-23 110.5 63 82.5
QL07p032118 Quercus lobata HOM05D005727 ORTHO05D007324 5.7e-23 110.5 63 79.4
Solyc10g075020.3 Solanum lycopersicum HOM05D005727 ORTHO05D007324 5.7e-23 110.5 61 83.6
Sopen10g027500 Solanum pennellii HOM05D005727 ORTHO05D007324 5.7e-23 110.5 61 83.6
MELO3C009104.2 Cucumis melo HOM05D005727 ORTHO05D007324 7.5e-23 110.2 63 79.4
ClCG10G022720 Citrullus lanatus HOM05D005727 ORTHO05D007324 9.8e-23 109.8 63 79.4
Gohir.A09G213660 Gossypium hirsutum HOM05D005727 ORTHO05D007324 9.8e-23 109.8 63 79.4
Gohir.D09G215000 Gossypium hirsutum HOM05D005727 ORTHO05D007324 9.8e-23 109.8 63 79.4
Gorai.006G235400 Gossypium raimondii HOM05D005727 ORTHO05D007324 9.8e-23 109.8 63 79.4
Sopen10g027490 Solanum pennellii HOM05D005727 ORTHO05D007324 9.8e-23 109.8 61 83.6
Thecc.04G151700 Theobroma cacao HOM05D005727 ORTHO05D007324 9.8e-23 109.8 63 82.5
Dinv16978 Davidia involucrata HOM05D005727 ORTHO05D007324 1.3e-22 109.4 61 83.6
Lj1g0000237 Lotus japonicus HOM05D005727 ORTHO05D007324 1.7e-22 109.0 63 79.4
Phvul.008G082900 Phaseolus vulgaris HOM05D005727 ORTHO05D007324 1.7e-22 109.0 63 79.4
PGR031G0696 Punica granatum HOM05D005727 ORTHO05D007324 2.2e-22 108.6 63 79.4
CSS0006704 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 2.8e-22 108.2 61 82.0
CSS0016709 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 2.8e-22 108.2 61 82.0
CsaV3_3G033100 Cucumis sativus L. HOM05D005727 ORTHO05D007324 2.8e-22 108.2 63 77.8
Sed0002775 Sechium edule HOM05D005727 ORTHO05D007324 3.7e-22 107.8 63 76.2
TAR267G0001 Trochodendron aralioides HOM05D005727 ORTHO05D007324 3.7e-22 107.8 63 77.8
TAR636G3506 Trochodendron aralioides HOM05D005727 ORTHO05D007324 3.7e-22 107.8 63 77.8
Ciclev10012658m.g Citrus clementina HOM05D005727 ORTHO05D007324 4.9e-22 107.5 63 77.8
MSTRG.5500 Avicennia marina HOM05D005727 ORTHO05D007324 6.3e-22 107.1 61 80.3
Cc06_g00400 Coffea canephora HOM05D005727 ORTHO05D007324 6.3e-22 107.1 61 82.0
VMungo1383G0728 Vigna mungo HOM05D005727 ORTHO05D007324 6.3e-22 107.1 63 77.8
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 8.3e-22 106.7 61 82.0
Lalb_Chr01g0023751 Lupinus albus HOM05D005727 ORTHO05D007324 1.1e-21 106.3 63 76.2
Glyma.18G213900 Glycine max HOM05D005727 ORTHO05D007324 1.4e-21 105.9 63 76.2
Glyma.09G275000 Glycine max HOM05D005727 ORTHO05D007324 1.8e-21 105.5 63 76.2
TWI53G1599 Tripterygium wilfordii HOM05D005727 ORTHO05D007324 1.8e-21 105.5 61 80.3
HPP92_018087 Vanilla planifolia HOM05D005727 ORTHO05D007324 1.8e-21 105.5 61 78.7
Oeu057982.1 Olea europaea HOM05D005727 ORTHO05D007324 2.4e-21 105.1 61 80.3
Migut.J00039 Erythranthe guttata HOM05D005727 ORTHO05D007324 5.4e-21 104.0 63 79.4
PSO017G0584 Papaver somniferum HOM05D005727 ORTHO05D007324 9.1e-21 103.2 61 77.0
SalBow5G2514 Salvia bowleyana HOM05D005727 ORTHO05D007324 9.1e-21 103.2 61 77.0
SalBow8G0913 Salvia bowleyana HOM05D005727 ORTHO05D007324 9.1e-21 103.2 61 77.0
Sc02g0000150 Simmondsia chinensis HOM05D005727 ORTHO05D007324 9.1e-21 103.2 63 74.6
arahy.Tifrunner.gnm1.ann1.CT9SCB Arachis hypogaea HOM05D005727 ORTHO05D007324 1.2e-20 102.8 74 70.3
PSO170G4055 Papaver somniferum HOM05D005727 ORTHO05D007324 1.2e-20 102.8 61 75.4
Lsat_1_v5_gn_5_152381 Lactuca sativa HOM05D005727 ORTHO05D007324 1.6e-20 102.4 61 77.0
Prupe.6G293500 Prunus persica HOM05D005727 ORTHO05D007324 1.6e-20 102.4 63 73.0
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 2.0e-20 102.1 63 71.4
SalBow1G5580 Salvia bowleyana HOM05D005727 ORTHO05D007324 2.7e-20 101.7 61 75.4
SalBow1G7101 Salvia bowleyana HOM05D005727 ORTHO05D007324 2.7e-20 101.7 61 75.4
Actinidia32567 Actinidia chinensis HOM05D005727 ORTHO05D007324 4.5e-20 100.9 63 74.6
Eucgr.A00739 Eucalyptus grandis HOM05D005727 ORTHO05D007324 4.5e-20 100.9 63 73.0
ATR1127G235 Amborella trichopoda HOM05D005727 ORTHO05D007324 5.9e-20 100.5 61 75.4
Lj3A941T101 Lonicera japonica HOM05D005727 ORTHO05D007324 5.9e-20 100.5 61 73.8
BcaC06g31951 Brassica carinata HOM05D005727 ORTHO05D007324 7.7e-20 100.1 63 69.8
A10p33800 Brassica napus HOM05D005727 ORTHO05D007324 7.7e-20 100.1 63 69.8
C09p74740 Brassica napus HOM05D005727 ORTHO05D007324 7.7e-20 100.1 63 69.8
BraA10t45408Z Brassica rapa HOM05D005727 ORTHO05D007324 7.7e-20 100.1 63 69.8
ECA248G0208 Erigeron canadensis HOM05D005727 ORTHO05D007324 7.7e-20 100.1 61 73.8
Thhalv10014581m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 7.7e-20 100.1 63 69.8
Psat3g118920 Pisum sativum HOM05D005727 ORTHO05D007324 7.7e-20 100.1 63 73.0
HanXRQChr11g0345321 Helianthus annuus HOM05D005727 ORTHO05D007324 1.0e-19 99.8 61 75.4
AUR62006416 Chenopodium quinoa HOM05D005727 ORTHO05D007324 1.3e-19 99.4 63 68.3
Carub.0003s0787 Capsella rubella HOM05D005727 ORTHO05D007324 1.7e-19 99.0 63 71.4
Sp6g41120 Schrenkiella parvula HOM05D005727 ORTHO05D007324 1.7e-19 99.0 63 68.3
BcaNung03303 Brassica carinata HOM05D005727 ORTHO05D007324 2.3e-19 98.6 63 68.3
BcaNung03307 Brassica carinata HOM05D005727 ORTHO05D007324 2.3e-19 98.6 63 68.3
AUR62029764 Chenopodium quinoa HOM05D005727 ORTHO05D007324 2.3e-19 98.6 63 66.7
THA.LOC104823320 Tarenaya hassleriana HOM05D005727 ORTHO05D007324 2.9e-19 98.2 66 66.7
BolC3t14633H Brassica oleracea HOM05D005727 ORTHO05D007324 3.8e-19 97.8 63 68.3
Hund19761 Selenicereus undatus HOM05D005727 ORTHO05D007324 3.8e-19 97.8 63 69.8
CARHR083040 Cardamine hirsuta HOM05D005727 ORTHO05D007324 5.0e-19 97.4 63 68.3
DCAR_023975 Daucus carota HOM05D005727 ORTHO05D007324 5.0e-19 97.4 61 70.5
Actinidia20792 Actinidia chinensis HOM05D005727 ORTHO05D007324 6.6e-19 97.1 63 71.4
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 6.6e-19 97.1 63 69.8
AagrBONN_evm.TU.Sc2ySwM_228.1047 Anthoceros agrestis HOM05D005727 ORTHO05D007324 8.6e-19 96.7 61 72.1
Aqoxy4G02424 Aquilegia oxysepala HOM05D005727 ORTHO05D007324 1.1e-18 96.3 62 74.2
AT3G08740 Arabidopsis thaliana HOM05D005727 ORTHO05D007324 1.1e-18 96.3 63 68.3
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.1e-18 96.3 63 71.4
SGA_v2.0_scaffold85G26621 Striga asiatica HOM05D005727 ORTHO05D007324 1.1e-18 96.3 63 71.4
Aa31LG5G18760 Aethionema arabicum HOM05D005727 ORTHO05D007324 1.5e-18 95.9 63 68.3
Sp3g07170 Schrenkiella parvula HOM05D005727 ORTHO05D007324 1.5e-18 95.9 63 68.3
AL3G19740 Arabidopsis lyrata HOM05D005727 ORTHO05D007324 3.3e-18 94.7 63 66.7
BcaC05g29610 Brassica carinata HOM05D005727 ORTHO05D007324 5.5e-18 94.0 63 68.3
A05p40060 Brassica napus HOM05D005727 ORTHO05D007324 5.5e-18 94.0 63 68.3
C05p59120 Brassica napus HOM05D005727 ORTHO05D007324 5.5e-18 94.0 63 68.3
Thhalv10023841m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 5.5e-18 94.0 63 66.7
BolC5t34584H Brassica oleracea HOM05D005727 ORTHO05D007324 1.2e-17 92.8 63 66.7
FAN05G2146 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.2e-17 92.8 64 68.8
FAN05G2443 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.2e-17 92.8 64 68.8
FAN05G4930 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.2e-17 92.8 64 68.8
FAN09G3145 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.2e-17 92.8 64 68.8
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 1.2e-17 92.8 64 70.3
Thhalv10022392m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 2.1e-17 92.0 63 65.1
HanXRQChr01g0000121 Helianthus annuus HOM05D005727 ORTHO05D007324 2.8e-17 91.7 61 63.9
RcHm_v2.0_Chr3g0460491 Rosa chinensis HOM05D005727 ORTHO05D007324 2.8e-17 91.7 64 70.3
FvH4_6g09890 Fragaria vesca HOM05D005727 ORTHO05D007324 3.6e-17 91.3 64 67.2
FAN14G2915 Fragaria x ananassa HOM05D005727 ORTHO05D007324 3.6e-17 91.3 64 67.2
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 3.6e-17 91.3 62 72.6
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 2.3e-16 88.6 62 71.0
BcaC01g05776 Brassica carinata HOM05D005727 ORTHO05D007324 3.0e-16 88.2 57 70.2
Os11g0116400 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 3.0e-16 88.2 63 60.3
Os12g0115900 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 3.0e-16 88.2 63 60.3
Pp3c23_18430 Physcomitrium patens HOM05D005727 ORTHO05D007324 5.2e-16 87.4 61 65.6
MD12G1188200 Malus domestica HOM05D005727 ORTHO05D007324 1.2e-15 86.3 64 64.1
CANSAT35G1579 Cannabis sativa HOM05D005727 ORTHO05D007324 1.5e-15 85.9 62 66.1
Mapoly0080s0087 Marchantia polymorpha HOM05D005727 ORTHO05D007324 1.5e-15 85.9 59 61.0
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 4.4e-15 84.3 61 59.0
Rhsim04G0121700 Rhododendron simsii HOM05D005727 ORTHO05D007324 2.9e-14 81.6 50 76.0
MCO07G614 Micromonas commoda HOM05D005727 ORTHO05D007324 6.3e-14 80.5 56 64.3
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 6.3e-14 80.5 61 57.4
SEGI_30349 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 6.3e-14 80.5 63 55.6
vmacro08938 Vaccinium macrocarpon HOM05D005727 ORTHO05D007324 7.0e-13 77.0 85 54.1
COL.COLO4_06480 Corchorus olitorius HOM05D005727 ORTHO05D007324 2.9e-11 71.6 61 59.0
Duzib268G0979 Durio zibethinus HOM05D005727 ORTHO05D007324 1.9e-10 68.9 42 73.8
Cre16.g691000 Chlamydomonas reinhardtii HOM05D005727 ORTHO05D007324 7.3e-10 67.0 52 55.8
unitig_578.g15912 Utricularia gibba HOM05D005727 ORTHO05D007324 4.7e-09 64.3 43 69.8
Aa31LG5G11490 Aethionema arabicum HOM05D005727 ORTHO05D007324 8.0e-09 63.5 44 61.4
MD04G1174600 Malus domestica HOM05D005727 ORTHO05D007324 3.1e-08 61.6 45 60.0


User provided reference genes

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