Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.2e-85 320.5 462 100.0
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.2e-32 145.2 183 95.6
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 2.1e-24 117.9 70 71.4
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 2.8e-24 117.5 70 71.4
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.8e-24 117.5 383 61.4
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 8.1e-24 115.9 71 69.0
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.1e-23 115.5 71 69.0
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.1e-23 115.5 71 69.0
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.4e-23 115.2 71 67.6
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.8e-23 114.8 74 66.2
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.8e-23 114.8 71 69.0
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.8e-23 114.8 70 70.0
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 3.1e-23 114.0 69 71.0
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 4.0e-23 113.6 69 66.7
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 5.2e-23 113.2 73 67.1
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 6.8e-23 112.8 74 64.9
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 8.9e-23 112.5 70 70.0
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 8.9e-23 112.5 69 69.6
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.2e-22 112.1 74 64.9
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.5e-22 111.7 70 70.0
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 2.6e-22 110.9 70 71.4
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.4e-22 110.5 70 67.1
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 3.4e-22 110.5 71 64.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 3.4e-22 110.5 71 64.8
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.4e-22 110.5 73 65.8
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 3.4e-22 110.5 71 64.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 5.8e-22 109.8 74 63.5
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 9.9e-22 109.0 72 62.5
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 9.9e-22 109.0 72 62.5
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 2.2e-21 107.8 70 71.4
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.2e-21 107.8 67 67.2
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 3.8e-21 107.1 70 64.3
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 3.8e-21 107.1 74 59.5
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 3.8e-21 107.1 74 59.5
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 4.9e-21 106.7 71 63.4
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 4.9e-21 106.7 71 63.4
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 6.4e-21 106.3 73 61.6
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 6.4e-21 106.3 68 67.6
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 1.1e-20 105.5 72 63.9
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.4e-20 105.1 71 63.4
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 2.4e-20 104.4 68 64.7
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 2.4e-20 104.4 68 64.7
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 2.4e-20 104.4 62 72.6
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.2e-20 104.0 73 61.6
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 5.4e-20 103.2 71 60.6
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 7.1e-20 102.8 69 68.1
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 7.1e-20 102.8 71 60.6
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 9.2e-20 102.4 69 66.7
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 9.2e-20 102.4 73 60.3
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 9.2e-20 102.4 71 64.8
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 9.2e-20 102.4 71 64.8
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 1.6e-19 101.7 71 59.2
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.6e-19 101.7 64 68.8
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.6e-19 101.7 69 66.7
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 1.6e-19 101.7 70 62.9
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 2.1e-19 101.3 70 61.4
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 3.5e-19 100.5 68 61.8
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 3.5e-19 100.5 71 57.7
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 4.6e-19 100.1 70 61.4
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.3e-18 98.6 61 68.9
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.7e-18 98.2 64 65.6
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 2.3e-18 97.8 71 60.6
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.3e-18 97.8 70 58.6
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.3e-18 97.8 70 58.6
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 2.3e-18 97.8 70 67.1
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 2.3e-18 97.8 71 56.3
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 3.0e-18 97.4 70 58.6
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 5.1e-18 96.7 70 55.7
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 5.1e-18 96.7 70 58.6
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.1e-18 96.7 70 58.6
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 6.6e-18 96.3 70 68.6
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 1.1e-17 95.5 64 65.6
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 1.1e-17 95.5 70 58.6
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.1e-17 95.5 71 56.3
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 1.5e-17 95.1 58 65.5
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 3.3e-17 94.0 71 66.2
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 3.3e-17 94.0 64 62.5
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 5.6e-17 93.2 58 63.8
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 5.6e-17 93.2 58 63.8
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 5.6e-17 93.2 69 56.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 5.6e-17 93.2 66 60.6
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 1.2e-16 92.0 74 50.0
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.6e-16 91.7 55 74.5
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 8.1e-16 89.4 65 55.4
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.8e-15 88.2 69 59.4
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 3.1e-15 87.4 66 57.6
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 3.4e-14 84.0 70 48.6
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 9.9e-14 82.4 70 54.3
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 9.9e-14 82.4 67 58.2
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.3e-13 82.0 70 55.7
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.3e-13 82.0 70 55.7
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.3e-13 82.0 70 55.7
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 1.7e-13 81.6 70 55.7
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 4.9e-13 80.1 70 54.3
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 8.4e-13 79.3 71 52.1
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 1.1e-12 79.0 70 54.3
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 1.1e-12 79.0 70 54.3
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.1e-12 79.0 71 52.1
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 1.4e-12 78.6 72 51.4
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.4e-12 78.6 72 51.4
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 2.4e-12 77.8 44 77.3
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 4.2e-12 77.0 71 50.7
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 1.7e-10 71.6 72 47.2
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.5e-09 67.8 69 40.6
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.5e-09 67.8 69 40.6
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 2.1e-08 64.7 74 45.9


User provided reference genes

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