Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0373 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.4e-19 97.4 53 100.0
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.9e-14 81.6 45 97.8
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.6e-13 78.6 45 93.3
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.8e-10 67.4 52 69.2
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 8.4e-10 66.2 45 75.6
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.2e-09 64.3 52 65.4
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 1.2e-08 62.4 45 75.6
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 2.1e-08 61.6 53 64.2
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 3.5e-08 60.8 46 71.7
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 3.5e-08 60.8 46 76.1
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 4.6e-08 60.5 46 76.1
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 4.6e-08 60.5 45 73.3
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 6.0e-08 60.1 45 73.3
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 6.0e-08 60.1 49 71.4
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 6.0e-08 60.1 46 76.1
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 6.0e-08 60.1 46 73.9
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 7.9e-08 59.7 46 73.9
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 7.9e-08 59.7 45 77.8
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 1.0e-07 59.3 46 76.1
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 1.0e-07 59.3 46 71.7
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 1.3e-07 58.9 46 71.7
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.3e-07 58.9 46 71.7
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.3e-07 58.9 46 71.7
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 2.3e-07 58.2 46 69.6
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 2.3e-07 58.2 46 71.7
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 2.3e-07 58.2 46 71.7
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 2.3e-07 58.2 45 73.3
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 2.3e-07 58.2 45 71.1
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 2.3e-07 58.2 45 73.3
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 3.0e-07 57.8 46 71.7
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 3.0e-07 57.8 46 69.6
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 3.0e-07 57.8 46 69.6
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 3.0e-07 57.8 46 69.6
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 3.0e-07 57.8 46 69.6
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 3.9e-07 57.4 46 69.6
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 3.9e-07 57.4 46 69.6
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 3.9e-07 57.4 46 71.7
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 6.7e-07 56.6 46 69.6
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 6.7e-07 56.6 46 69.6
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 8.7e-07 56.2 48 72.9
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 8.7e-07 56.2 46 69.6
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 1.1e-06 55.8 45 73.3
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 1.1e-06 55.8 45 73.3
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 1.1e-06 55.8 46 73.9
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 1.1e-06 55.8 46 67.4
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 1.1e-06 55.8 45 71.1
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 1.1e-06 55.8 46 71.7
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 1.5e-06 55.5 46 69.6
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 1.5e-06 55.5 46 69.6
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 1.5e-06 55.5 45 71.1
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 1.5e-06 55.5 46 73.9
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 73.3
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 71.1
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 73.3
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 73.3
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 73.3
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.9e-06 55.1 47 70.2
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.9e-06 55.1 47 70.2
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 73.3
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.9e-06 55.1 45 71.1
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 1.9e-06 55.1 46 69.6
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 2.5e-06 54.7 46 69.6
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 2.5e-06 54.7 46 69.6
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 3.3e-06 54.3 46 71.7
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 3.3e-06 54.3 46 65.2
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 3.3e-06 54.3 45 71.1
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 4.3e-06 53.9 45 71.1
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 4.3e-06 53.9 46 69.6
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 4.3e-06 53.9 46 69.6
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 5.6e-06 53.5 46 65.2
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 7.4e-06 53.1 45 71.1
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 9.6e-06 52.8 45 68.9
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 9.6e-06 52.8 45 64.4
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 9.6e-06 52.8 48 58.3
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 9.6e-06 52.8 46 67.4
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 9.6e-06 52.8 45 68.9
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 9.6e-06 52.8 46 69.6


User provided reference genes

Program Settings