Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0343 Ceratophyllum demersum HOM05D002204 ORTHO05D015753 5.3e-81 304.3 152 100.0
CDE02G2925 Ceratophyllum demersum HOM05D002204 ORTHO05D002875 2.0e-72 275.8 151 92.1
Dinv28312 Davidia involucrata HOM05D002204 ORTHO05D002875 1.5e-19 100.1 145 42.8
GSVIVG01022299001 Vitis vinifera HOM05D002204 ORTHO05D015753 1.7e-18 96.7 151 40.4
Lj4A810T53 Lonicera japonica HOM05D002204 ORTHO05D002875 9.2e-17 90.9 148 39.2
QL06p053171 Quercus lobata HOM05D002204 ORTHO05D002875 1.3e-15 87.0 130 44.6
TAR628G0862 Trochodendron aralioides HOM05D002204 ORTHO05D002875 1.7e-15 86.7 146 35.6
Manes.05G125100 Manihot esculenta HOM05D002204 ORTHO05D002875 2.9e-15 85.9 108 42.6
SGA_v2.0_scaffold133G34586 Striga asiatica HOM05D002204 ORTHO05D002875 2.9e-15 85.9 104 47.1
CSS0012958 Camellia sinensis var. sinensis HOM05D002204 ORTHO05D002875 3.8e-15 85.5 91 51.6
Migut.C00370 Erythranthe guttata HOM05D002204 ORTHO05D002875 3.8e-15 85.5 90 47.8
CsaV3_6G047890 Cucumis sativus L. HOM05D002204 ORTHO05D002875 8.6e-15 84.3 98 49.0
SalBow7G2538 Salvia bowleyana HOM05D002204 ORTHO05D002875 8.6e-15 84.3 90 47.8
Oeu035852.2 Olea europaea HOM05D002204 ORTHO05D002875 1.1e-14 84.0 89 49.4
PGR102G3164 Punica granatum HOM05D002204 ORTHO05D002875 1.1e-14 84.0 149 38.3
Eucgr.A00114 Eucalyptus grandis HOM05D002204 ORTHO05D015753 1.5e-14 83.6 128 40.6
ClCG01G020930 Citrullus lanatus HOM05D002204 ORTHO05D002875 1.9e-14 83.2 98 51.0
Migut.L00780 Erythranthe guttata HOM05D002204 ORTHO05D002875 2.5e-14 82.8 124 41.9
Actinidia15511 Actinidia chinensis HOM05D002204 ORTHO05D002875 3.3e-14 82.4 83 51.8
Rhsim06G0004700 Rhododendron simsii HOM05D002204 ORTHO05D002875 3.3e-14 82.4 145 39.3
MSTRG.24917 Avicennia marina HOM05D002204 ORTHO05D002875 4.3e-14 82.0 104 43.3
Eucgr.J02541 Eucalyptus grandis HOM05D002204 ORTHO05D002875 5.6e-14 81.6 127 40.2
GSVIVG01013402001 Vitis vinifera HOM05D002204 ORTHO05D002875 5.6e-14 81.6 88 50.0
Haze_03628 Corylus avellana HOM05D000109 ORTHO05D002875 9.5e-14 80.9 99 47.5
Rhsim10G0192900 Rhododendron simsii HOM05D002204 ORTHO05D002875 9.5e-14 80.9 93 52.7
Hma1.2p1_0085F.1_g044540 Hydrangea macrophylla HOM05D002204 ORTHO05D002875 2.1e-13 79.7 146 37.0
Actinidia22889 Actinidia chinensis HOM05D002204 ORTHO05D002875 2.8e-13 79.3 88 47.7
MSTRG.3635 Avicennia marina HOM05D002204 ORTHO05D002875 2.8e-13 79.3 101 48.5
Oeu021991.1 Olea europaea HOM05D002204 ORTHO05D015753 2.8e-13 79.3 104 44.2
CAN.G311.140 Capsicum annuum HOM05D002204 ORTHO05D002875 4.7e-13 78.6 154 36.4
ECA238G1625 Erigeron canadensis HOM05D002204 ORTHO05D002875 8.0e-13 77.8 110 41.8
Lsat_1_v5_gn_2_660 Lactuca sativa HOM05D002204 ORTHO05D002875 8.0e-13 77.8 85 45.9
Sed0008668 Sechium edule HOM05D002204 ORTHO05D002875 1.4e-12 77.0 152 39.5
Cc07_g11990 Coffea canephora HOM05D002204 ORTHO05D002875 1.8e-12 76.6 112 42.9
Duzib147G1495 Durio zibethinus HOM05D002204 ORTHO05D002875 2.3e-12 76.3 150 36.0
MSTRG.995 Avicennia marina HOM05D002204 ORTHO05D002875 3.0e-12 75.9 107 42.1
Nitab4.5_0009646g0050 Nicotiana tabacum HOM05D002204 ORTHO05D002875 3.0e-12 75.9 91 44.0
arahy.Tifrunner.gnm1.ann1.QAQH8E Arachis hypogaea HOM05D002204 ORTHO05D002875 5.2e-12 75.1 109 43.1
HanXRQChr14g0427841 Helianthus annuus HOM05D002204 ORTHO05D002875 5.2e-12 75.1 85 47.1
Potri.005G254000 Populus trichocarpa HOM05D002204 ORTHO05D002875 5.2e-12 75.1 110 39.1
SalBow5G0659 Salvia bowleyana HOM05D002204 ORTHO05D002875 5.2e-12 75.1 86 45.3
arahy.Tifrunner.gnm1.ann1.DF5JNQ Arachis hypogaea HOM05D002204 ORTHO05D002875 8.9e-12 74.3 109 43.1
Gohir.D03G000900 Gossypium hirsutum HOM05D002204 ORTHO05D002875 8.9e-12 74.3 145 36.6
Gorai.003G001300 Gossypium raimondii HOM05D002204 ORTHO05D002875 8.9e-12 74.3 145 36.6
Nitab4.5_0008540g0010 Nicotiana tabacum HOM05D002204 ORTHO05D002875 8.9e-12 74.3 100 44.0
TPR.G13732 Trifolium pratense HOM05D002204 ORTHO05D002875 8.9e-12 74.3 108 42.6
Gohir.A02G178850 Gossypium hirsutum HOM05D002204 ORTHO05D015753 1.2e-11 73.9 145 36.6
QL02p015199 Quercus lobata HOM05D002204 ORTHO05D002875 2.0e-11 73.2 95 42.1
Sc07g0001410 Simmondsia chinensis HOM05D002204 ORTHO05D002875 2.0e-11 73.2 92 47.8
PGSC0003DMG400009991 Solanum tuberosum HOM05D002204 ORTHO05D002875 2.0e-11 73.2 91 42.9
MBI08_g06881_MAGBIO Magnolia biondii HOM05D002204 ORTHO05D002875 3.4e-11 72.4 96 43.8
Nitab4.5_0001467g0130 Nicotiana tabacum HOM05D002204 ORTHO05D002875 4.4e-11 72.0 141 39.0
Peaxi162Scf00040g03134 Petunia axillaris HOM05D002204 ORTHO05D002875 4.4e-11 72.0 106 43.4
Peaxi162Scf00680g00118 Petunia axillaris HOM05D002204 ORTHO05D002875 4.4e-11 72.0 142 33.1
Prupe.7G185000 Prunus persica HOM05D002204 ORTHO05D002875 4.4e-11 72.0 110 40.9
CANSAT25G1037 Cannabis sativa HOM05D002204 ORTHO05D002875 5.7e-11 71.6 107 41.1
COL.COLO4_22561 Corchorus olitorius HOM05D002204 ORTHO05D002875 5.7e-11 71.6 151 36.4
Solyc04g082620.3 Solanum lycopersicum HOM05D002204 ORTHO05D002875 5.7e-11 71.6 91 41.8
TWI36G0160 Tripterygium wilfordii HOM05D002204 ORTHO05D002875 5.7e-11 71.6 107 40.2
Sopen04g036250 Solanum pennellii HOM05D002204 ORTHO05D002875 7.5e-11 71.2 148 33.8
HanXRQChr16g0531931 Helianthus annuus HOM05D002204 ORTHO05D002875 9.8e-11 70.9 102 40.2
Sabra05G0197000 Salix brachista HOM05D002204 ORTHO05D002875 9.8e-11 70.9 111 36.9
Lj4g0027136 Lotus japonicus HOM05D002204 ORTHO05D002875 1.3e-10 70.5 152 34.2
Phvul.003G271000 Phaseolus vulgaris HOM05D002204 ORTHO05D002875 1.3e-10 70.5 106 42.5
Lj2C501T13 Lonicera japonica HOM05D002204 ORTHO05D015753 1.7e-10 70.1 91 45.1
Medtr8g073190 Medicago truncatula HOM05D002204 ORTHO05D002875 1.7e-10 70.1 105 39.0
CiPaw.07G135500 Carya illinoinensis HOM05D002204 ORTHO05D002875 2.2e-10 69.7 91 41.8
Cc10_g00420 Coffea canephora HOM05D002204 ORTHO05D002875 2.9e-10 69.3 88 42.0
Hund03595 Selenicereus undatus HOM05D002204 ORTHO05D002875 2.9e-10 69.3 93 43.0
unitig_46.g18026 Utricularia gibba HOM05D002204 ORTHO05D002875 3.7e-10 68.9 77 45.5
Gohir.A01G103100 Gossypium hirsutum HOM05D002204 ORTHO05D002875 8.3e-10 67.8 88 39.8
Gohir.D01G088400 Gossypium hirsutum HOM05D002204 ORTHO05D002875 8.3e-10 67.8 83 42.2
Gorai.002G114100 Gossypium raimondii HOM05D002204 ORTHO05D002875 8.3e-10 67.8 82 42.7
TPR.G33891 Trifolium pratense HOM05D002204 ORTHO05D002875 8.3e-10 67.8 148 34.5
Ciclev10000190m.g Citrus clementina HOM05D002204 ORTHO05D002875 1.1e-09 67.4 90 38.9
Duzib116G0792 Durio zibethinus HOM05D002204 ORTHO05D002875 1.1e-09 67.4 84 40.5
Lj2g0022367 Lotus japonicus HOM05D002204 ORTHO05D002875 1.1e-09 67.4 98 38.8
VMungo1215G3413 Vigna mungo HOM05D002204 ORTHO05D002875 1.4e-09 67.0 120 37.5
COL.COLO4_37749 Corchorus olitorius HOM05D002204 ORTHO05D010558 1.8e-09 66.6 88 38.6
MELO3C008016.2 Cucumis melo HOM05D002204 ORTHO05D002875 2.4e-09 66.2 142 35.2
Ca_02845_v3 Cicer arietinum L. HOM05D002204 ORTHO05D002875 5.4e-09 65.1 90 40.0
Hund01790 Selenicereus undatus HOM05D002204 ORTHO05D002875 7.0e-09 64.7 105 40.0
Thecc.08G063100 Theobroma cacao HOM05D002204 ORTHO05D002875 7.0e-09 64.7 89 38.2
Medtr5g024510 Medicago truncatula HOM05D002204 ORTHO05D002875 9.2e-09 64.3 103 36.9
AUR62016567 Chenopodium quinoa HOM05D002204 ORTHO05D002875 1.2e-08 63.9 91 44.0
Ca_24990_v3 Cicer arietinum L. HOM05D002204 ORTHO05D002875 1.2e-08 63.9 89 41.6
Phvul.002G117600 Phaseolus vulgaris HOM05D002204 ORTHO05D002875 1.2e-08 63.9 83 38.6
EL10Ac6g15042 Beta vulgaris HOM05D002204 ORTHO05D002875 2.0e-08 63.2 85 43.5
Sed0026219 Sechium edule HOM05D002467 ORTHO05D002875 2.0e-08 63.2 90 42.2
DCAR_016789 Daucus carota HOM05D002204 ORTHO05D002875 2.7e-08 62.8 79 46.8
CsaV3_6G042090 Cucumis sativus L. HOM05D002204 ORTHO05D002875 3.5e-08 62.4 142 34.5
Potri.007G059000 Populus trichocarpa HOM05D002204 ORTHO05D002875 3.5e-08 62.4 121 39.7
CAN.G1238.25 Capsicum annuum HOM05D002204 ORTHO05D002875 4.6e-08 62.0 105 41.9
Psat2g147920 Pisum sativum HOM05D002204 ORTHO05D002875 4.6e-08 62.0 105 36.2
TWI09G0074 Tripterygium wilfordii HOM05D002204 ORTHO05D002875 4.6e-08 62.0 124 33.1
Duzib093G0243 Durio zibethinus HOM05D002204 ORTHO05D002875 5.9e-08 61.6 88 36.4
Glyma.09G197000 Glycine max HOM05D002204 ORTHO05D002875 5.9e-08 61.6 104 38.5
Glyma.16G111800 Glycine max HOM05D002204 ORTHO05D002875 5.9e-08 61.6 104 37.5
Cpa.g.sc26.160 Carica papaya HOM05D002204 ORTHO05D002875 7.8e-08 61.2 109 34.9
Haze_22837 Corylus avellana HOM05D002204 ORTHO05D002875 7.8e-08 61.2 89 39.3
ClCG01G015810 Citrullus lanatus HOM05D002204 ORTHO05D002875 1.3e-07 60.5 142 35.2
Lalb_Chr05g0229591 Lupinus albus HOM05D002204 ORTHO05D002875 1.3e-07 60.5 99 36.4
Sc02g0009200 Simmondsia chinensis HOM05D002204 ORTHO05D002875 2.3e-07 59.7 100 39.0
ATR0807G006 Amborella trichopoda HOM05D002204 ORTHO05D002875 3.0e-07 59.3 104 40.4
TWI56G0036 Tripterygium wilfordii HOM05D002204 ORTHO05D002875 3.0e-07 59.3 150 33.3
arahy.Tifrunner.gnm1.ann1.770S43 Arachis hypogaea HOM05D002204 ORTHO05D002875 5.0e-07 58.5 83 39.8
arahy.Tifrunner.gnm1.ann1.9UP1GZ Arachis hypogaea HOM05D002204 ORTHO05D002875 5.0e-07 58.5 83 39.8
MD02G1114000 Malus domestica HOM05D002204 ORTHO05D002875 5.0e-07 58.5 112 33.0
Ah.11g041810 Amaranthus hybridus HOM05D002204 ORTHO05D002875 6.6e-07 58.2 86 41.9
Glyma.01G157800 Glycine max HOM05D002204 ORTHO05D002875 6.6e-07 58.2 94 40.4
Atru.chr13.93 Acer truncatum HOM05D002204 ORTHO05D030794 8.6e-07 57.8 90 34.4
EL10Ac1g01902 Beta vulgaris HOM05D002204 ORTHO05D002875 8.6e-07 57.8 108 39.8
ECA246G1616 Erigeron canadensis HOM05D002204 ORTHO05D000001 1.1e-06 57.4 94 39.4
Glyma.11G087200 Glycine max HOM05D002204 ORTHO05D002875 1.5e-06 57.0 105 37.1
Ciclev10027213m.g Citrus clementina HOM05D002204 ORTHO05D002875 1.9e-06 56.6 74 41.9
AUR62042588 Chenopodium quinoa HOM05D002204 ORTHO05D002875 2.5e-06 56.2 83 39.8
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 9.5e-06 54.3 102 32.4


User provided reference genes

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