Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 1.9e-72 275.8 146 100.0
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 2.2e-39 166.0 150 66.0
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.9e-35 152.9 150 62.0
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.8e-33 146.4 154 57.1
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 1.8e-33 146.4 153 57.5
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 3.7e-31 138.7 128 58.6
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 2.0e-29 132.9 136 55.9
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 3.4e-29 132.1 127 60.6
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 1.0e-28 130.6 129 56.6
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 1.0e-28 130.6 127 58.3
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 1.7e-28 129.8 153 54.2
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 6.5e-28 127.9 142 53.5
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 1.9e-27 126.3 127 58.3
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 2.5e-27 125.9 131 55.0
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 3.2e-27 125.6 141 51.8
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 4.2e-27 125.2 130 54.6
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 7.2e-27 124.4 127 59.1
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 7.2e-27 124.4 124 57.3
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.2e-26 123.6 131 55.7
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 2.1e-26 122.9 131 55.7
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.1e-26 122.9 133 57.1
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 2.7e-26 122.5 136 55.9
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 6.1e-26 121.3 133 55.6
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 6.1e-26 121.3 133 55.6
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 6.1e-26 121.3 133 55.6
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 7.9e-26 120.9 127 56.7
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 7.9e-26 120.9 130 56.2
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 7.9e-26 120.9 145 53.8
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 1.0e-25 120.6 150 52.7
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 1.0e-25 120.6 125 58.4
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 1.4e-25 120.2 135 55.6
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 1.4e-25 120.2 142 52.8
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 1.8e-25 119.8 139 51.1
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 1.8e-25 119.8 149 51.7
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.8e-25 119.8 151 51.7
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 1.8e-25 119.8 135 55.6
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 2.3e-25 119.4 131 55.7
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 3.9e-25 118.6 126 53.2
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 3.9e-25 118.6 129 56.6
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 5.1e-25 118.2 128 57.0
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 5.1e-25 118.2 150 52.0
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 5.1e-25 118.2 131 55.0
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 5.1e-25 118.2 128 57.0
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 6.7e-25 117.9 125 56.0
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 6.7e-25 117.9 118 57.6
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 8.8e-25 117.5 134 53.0
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 2.0e-24 116.3 128 56.2
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 2.6e-24 115.9 121 55.4
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 2.6e-24 115.9 133 54.1
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 3.3e-24 115.5 127 55.1
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 9.7e-24 114.0 125 54.4
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.3e-23 113.6 125 52.8
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 2.2e-23 112.8 125 52.0
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 2.2e-23 112.8 143 49.7
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 4.8e-23 111.7 129 53.5
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 4.8e-23 111.7 126 51.6
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 4.8e-23 111.7 125 53.6
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 4.8e-23 111.7 142 48.6
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 8.2e-23 110.9 126 51.6
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.1e-22 110.5 125 50.4
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.1e-22 110.5 125 50.4
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 2.4e-22 109.4 127 49.6
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 2.4e-22 109.4 145 50.3
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 3.1e-22 109.0 140 50.0
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 4.1e-22 108.6 127 55.1
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 4.1e-22 108.6 128 53.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 5.3e-22 108.2 133 51.1
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 7.0e-22 107.8 128 53.9
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 1.5e-21 106.7 139 46.0
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 2.6e-21 105.9 131 51.1
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.6e-21 105.9 145 44.8
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 3.4e-21 105.5 142 45.1
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.4e-21 105.5 133 50.4
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 1.0e-20 104.0 139 47.5
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.7e-20 103.2 142 44.4
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 2.2e-20 102.8 139 46.8
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 2.9e-20 102.4 127 49.6
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 2.9e-20 102.4 133 48.9
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 3.8e-20 102.1 133 48.9
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 5.0e-20 101.7 129 50.4
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 6.5e-20 101.3 144 43.1
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 8.5e-20 100.9 128 50.0
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 8.5e-20 100.9 139 44.6
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.4e-19 100.1 124 50.8
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 1.4e-19 100.1 150 46.7
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 3.2e-19 99.0 124 49.2
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 4.2e-19 98.6 138 44.9
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 4.2e-19 98.6 145 43.4
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 5.5e-19 98.2 126 49.2
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 7.2e-19 97.8 129 49.6
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 3.6e-18 95.5 146 43.2
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 4.7e-18 95.1 140 44.3
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 4.7e-18 95.1 140 44.3
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 8.0e-18 94.4 127 49.6
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 2.3e-17 92.8 128 47.7
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 2.3e-17 92.8 128 47.7
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.0e-17 92.4 132 45.5
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 6.7e-17 91.3 120 47.5
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 6.7e-17 91.3 131 45.8
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 1.1e-16 90.5 98 50.0
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.5e-16 90.1 128 46.1
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 3.3e-16 89.0 146 41.8
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 2.2e-15 86.3 121 43.0
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 3.7e-15 85.5 141 41.8
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.8e-15 85.1 76 59.2
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 1.6e-13 80.1 140 42.1
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 4.5e-13 78.6 126 42.1
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 5.9e-13 78.2 140 41.4
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 5.9e-13 78.2 140 41.4
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 5.9e-13 78.2 129 41.1
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 5.0e-12 75.1 137 39.4
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.9e-11 73.2 84 53.6
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 2.5e-11 72.8 127 40.9
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 2.1e-10 69.7 127 38.6
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 2.7e-10 69.3 97 44.3
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 4.7e-10 68.6 126 38.9
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 2.3e-09 66.2 80 51.2
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 7.0e-06 54.7 68 44.1


User provided reference genes

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